| mature miRNA: GTATAGCATCATGAGCAATCA species: Glycine max database: miRNEST The numbers on the right side of the alignments show a score calculated for them. When calculating the score, a mismatch is given a score of 1, bulge: 2, and wobble: 0.5. |
| Predicted miRNA targets | |||||||||
gi|214005940|gb|DB985976.1|DB985976 DB985976 full-length enriched soybean cDNA library, mixture of seedling, young plant, adult GTATAGCATCATGAGCAATCA EST sequence (targeted fragment marked with yellow): GCTAACTTGAAACAGTAATAACAACATATAAGCTAGTGAGCATAATGGTAATCAGTTCAATTAATGCTGCTAAAAAAGTAGCATTCAAATGATTAATCACACAAATGTTGCATATACATCGAAATATAGCGCATTAATTAGTACCATCATCTTAATTAATTAAGCTAAATGAGAATAAAGAAAACTAATTAAGCTTGATTTCCATGAATTATGAAGTCTTCAAGGGCTTGCAAATACTGTCACGGCTAGCTAGCACACATTTTATTCAGGAATAATGAAGTATAGCATCATGAGCAATCAGCCTTAGATTTTTTTTTAGCAGATTGACTGCTCATGATGTTATATCATTTCCATGAATTTACCTCTATGCATGCTACCATATTTATATGTATATGCTGCCCCATTTGTAAAAAACTCCTAACGAAAGCCCCCTCCTAGGGCTGGAGCCCAATAATCTGCTCCATTGTCACTTCCAACTTGCAGTGTGCATGACACTGGCACCAGGCTCAACCCTCTACTCCTCAGCCCCTTCTTTGGTTCTTCTTGAAAAAAAAAAAAAAAAGCTGCTATAAGGGTTCAGCAGTTTTCATCCAGCAGC | |||||||||
gi|192312980|gb|FK004626.1|FK004626 GLMDH62TR JCVI-SOY2 Glycine max cDNA 5', mRNA sequence GTATAGCATCATGAGCAATCA EST sequence (targeted fragment marked with yellow): GGTAGGAAGGAAAAGCTAGGTGAGAGAATTACGGCCCTTCATCAGCTCGTTTCCCCATTTGGGAAGACTGACACGGCCTCTGTCTTGTTAGAAGCTATTGGGTATATCAGATTCCTTCAGAGTCAAATTGAGGCTCTTAGCTTACCATACTTGAGCGGTGGATCAGGGAACACGAGGCAGCAACATTCTGTTCAAGGAGAGAAGACTTGTATATTCCCTGAAGACCCCGGTCAGCTGCTGGATGAAAACTGCTTGAAGAGGAAAGCAGCTGGAGAGCCGGATACTCAAGAAGAACCAAAGAAGGGGCTGAGGAGTAGAGGGTTGTGTCTGGTGCCAGTGTCATGCACACTGCAAGTTGGAAGTGACAATGGAGCAGATTATTGGGCTCCAGCCCTAGGAGGGGGCTTTCGTTAGGAGTTTTTTACAAATGGGGCAGCATATACATATAAATATGGTAGCATGCATAGAGGTAAATTCATGGAAATGATATAACATCATGAGCAGTCAATCTGCTAAAAAAAATCTAAGGCTGATTGCTCATGATGCTATACTTCATTATTCCTGAATAAAATGTGTGCTAGCTAGCCGTGACAGTATTTGCAAGCCCTTGAAGACTTCATAATTCATGGAAATCAAGCTTAATTAGTTTTCT | |||||||||
gi|192306091|gb|FG996551.1|FG996551 GLLEQ35TF JCVI-SOY1 Glycine max cDNA 5', mRNA sequence GTATAGCATCATGAGCAATCA EST sequence (targeted fragment marked with yellow): GGAATGATACTGTTCATATAACAAGAGAAAGTTCTGTGGCTACTGAGTGCCCTCCCGTTGTTGAAAGTGTTGAGACATACAGGGACAGAACTCCAGTAGCCACAGATAGTTCTCATCCACGAAGAACCTCTTCCACTGTTAGGGAATATTCTGTTGACAATCGGTTTTCTAACATGGTTTCAAATGTTTCAGTGGTGCATAATGACACTGTTCATATAACAAGGGAAAGTTCTGCGACTACTGAGTGCCCTCCTGTTGTTGAAAATGTTGAGACATACAGAGATAGGACTCCAGCAGCCACTGATAGTTCTCATCCACGAAGAGCCTCTTCCTCTGTTTTAAACACCAGCGATGTCGAGATGGGTGATGCCAGTGACCATCCACTCATACTGTCTGGAGACCAAGAGGTCCCGTTCACATACATGGCTAGTTTGTCAGCCAAGTGGGCTAAAATGAAAGAGGAAGCTCCTGCAATTCGGGGTAAAATCAAGTGCTTTTTGACTGGTGTAAAAGGATTCCGGTACAAGAAGAGGACATCATATGAGCTTCAGCATATGTAGACGATGGTAGCCTTATTTCTGAAATCCTCATTGATCATGATGTTGTACAGAAAGGAATTGGTTTTTCTCCTGAGGAGGTAACTGCGGCCATTTCTTCTCCTGACACGAAAACTGTCCAACAAATGAGGGATACAATGCATAAATTTCAAGCATTTTTAGCAAACTT | |||||||||
gi|120493552|gb|EH221719.1|EH221719 JGI_ABWZ2522.rev ABWZ Phakopsora pachyrhizi infected soybean leaf tissue 13-15 days post ino GTATAGCATCATGAGCAATCA EST sequence (targeted fragment marked with yellow): CTAAGNCTGATTGCTCATGATGCTATACTTCATTATTCCTGAATAAAATGTGTGCTAGCTAGCCGTGACAGTATTTGCAAGCCCTTGAAGACTTCATAATTCATGGAAATCAAGCTTAATTAGTTTTCTTTATTCTCATTTAGCTTAATTAATTAAGATGATGGTACTAATTAATGCGCTATATTTCGATGTATATGCAACATTTGTGTGATTAATCATTTGAATGCTACTTTTTTAGC | |||||||||
gi|254314960|gb|GR829953.1|GR829953 CCCC439.b1 CCCC Glycine max callus grown in dark condition Glycine max cDNA clone CCCC439 5' GTATAGCATCATGAGCAATCA EST sequence (targeted fragment marked with yellow): ATTCTGTAGATACATATGGCAAAGAAGCAGACAAAAGTCAAGAGGATGCTATGGTTCTAGCAGATGAAAAACAATGCTTGTGTGTGTTGTGTGGTGAGCTATTTGAAGATTTTTACTGTCAGGAAACTGGTGAGTGGATGTTCAAAGGGGCTGTTTACCTGGCCAACTCTGATAGCAAAAGTGAGATGGGAATTAGAGATGTGAGTACTGGAAGGGGTCCTATCATTCATGCAAGTTGCTTATCAGATAACTCAGTTTCCAGTGTCCTCGAGACGGGACAGGATTAAAGCAAGTGTAGAGCATTGGAGCTCTGCTGTAGCAAGAACTTGGAAGCCGATTGAACCCAGGTTTACTTTGCATTTTCCAAATTTGATGGCTCTTGATGCTAAATTTATTTCTCTAATTGGTTTCTAGAGCTGTCAAACAAATTTTGTGCACTTTTTTTGTTTTCCTTAGTTTCTTTTGTACTCAGGAAGAAGAGGAAATTCCTTAGTGTTCAAAGTATATAAATGCGATAGTTTTTGCAGCTCAACTTTTGCTCATTGATGTGGTTGCCTAACTTCATTTTAAATGAAGTGGATTTTTGTTTTCTGAACAGCATCTGGTTGTAATATGGAGCAAAGCACTATGGCCATAGTTATCGCAAATGTTGGATGGCATTCTCTGTA | |||||||||
gi|209706182|gb|BW653447.1|BW653447 BW653447 GMFL01 Glycine max cDNA clone GMFL01-05-C19 3', mRNA sequence GTATAGCATCATGAGCAATCA EST sequence (targeted fragment marked with yellow): CCCCTTGCATCAGATACCCCAAGATTTGTGTCACTCACTTTGACTTTGCTAGCCCTCACATACTTTGTGGCTGTGGCCATCCCAAATATATGGTTTTTTTTTCAGTTCTTGGGATCCACAACCATTGTTTGCACCTCATTCATCTTCCCTGCCGCAATTGTTCTAAGGGACATGCATGGCATATCAAAGACAAAAGATCAAGTGATGGCAATAGTGGTGATTGTTTTGGCTGTAGGAACAAGCGGAATTGCTATATGGACCAACTTGAATGGTTCAGGGGCTGCTCAATGATTAACCATGATGCTATATAACACCCAGTCTTTTCAAGTTTTAGGGAAGCCTAGTGAACAGCTGCATCAATTTGGTCCTTAATTTGATTAATTTATCTTATAGAAATTAATTTAATAACATTTAAAGGTGAGATTGAGAATTGCACATCTTGTATTTTGAAACTATAGACGATCCTACTTTGATTCAAACACGAGTCTGCCTTGTTAGCTTTTATTGGAGTTAGTACATCAGGTTTAGGCAGGGTTTCAATTTTATCTATTCAAATATTCAGCC | |||||||||
gi|192300440|gb|FG987897.1|FG987897 GLLCB40TF JCVI-SOY1 Glycine max cDNA 5', mRNA sequence GTATAGCATCATGAGCAATCA EST sequence (targeted fragment marked with yellow): GCAGAATTACCGCCCTTCATCAACTCGTTTCCCCATTCGGAAAGACTGACACGGCTTCTGTCTTATTAGAAGCTATTGGGTATATCAGATTCCTTCAGAGTCAAATTGAGGCCCTTAGCTTACCATACTTGGGCAGTGGATCAGGAAACATGAGGCACCAACAATCCGTTCAAGGAGAGAAGAATTGTATATTCCCTGAAGACCCCGGTCAGTTGCTGAATGAAAACTGTTTGAAGAGGAAAGCAGCTAGTAGTGAGCAGGATTCTCAAGAAGAAGCAAATAAAGACCTGAGGAGTAGAGGGTTGTGCCTGGTTCCAGTGTCATGTACGCTCCAAGTTGGAAGTGACAATGGAGCTGACTATTGGGCTCCTGCTTTTGGTGGGGGATTTCGGTAGATTGCTCAACTTACTATATATTAATGGGTTATCATGCATATGCAGCATATATACAGCAGAGAGGAAAATATAATATTCATGGAGATTGTATAACATCATTAGCAGTCAATCTGCTGCAAAACCTAATTAAGGCTGATTGCTCATGATGCTATACAGCATTCCCGAATAAAATGTATGCTGCCAGTCAAGTAGTATATATTTTGCAAGCCCTTGTGAAGACTCCTTAATTCACGGAAA | |||||||||
gi|254328233|gb|GR835198.1|GR835198 CCCC7759.g1 CCCC Glycine max callus grown in dark condition Glycine max cDNA clone CCCC7759 GTATAGCATCATGAGCAATCA EST sequence (targeted fragment marked with yellow): CTATTAGAAGCTATGGGCTATATCAGATTCCTTCAGAGTCAAATTGAGGCCCTTAGCTTACCATACTTGGGCAGTGGATCAGGAAACATGAGACAGCAACAATCCGTTCAAGGAGAGAACAATTGTATATTCCCTGAAGACCCCGGTCAGTTGCTGAATGAAAACTGTTTGAAGAGGAAAGCAGCTAGTGAGCAGGATTCTCAAGAAGAACCAAAGAAAGACCTGAGGAGTAGAGGGTTATGCTTGGTTCCAGTGTCATGCACGCTGCAAGTTGGAAGTGACAATGGAGCTGACTATTGGGCTCCTGCTTTTGGTGGGGGATTTCGGTAGATTGCTTAACTTACTATTAATAGGTTATCATATGCAGCATACAGAGAGAGAAAATATATTCATGGAGATTGTATAACATCATTAGCAGTCAATCTGCTGCAAAACCTAATTAAGGCTGATTGCTCATGATGCTATACGCAATTCCTGAATAAAATGTATGCTGCCAGTCAAGTTATATATTTGCAAGCCCTTGTTAAGACTCCTTAATTCACGGAAATCAAGCTTTAGTTATTTTCACTAGCTTAATTAATTAAGAGGTCGATCGTACAATGTTCGATAATTGTGTATATATGCAATAATTGTATGATTATTTTC | |||||||||
gi|208154353|gb|GD955406.1|GD955406 454GmaGlobSeed698055 Soybean Seeds Containing Globular-Stage Embryos Glycine max cDNA, mRNA GTATAGCATCATGAGCAATCA EST sequence (targeted fragment marked with yellow): ACTAGCATCTAGCAATAATACAATGGTATAAACCTAGTGGATTCATGATTTGGAGCATTGCAGTGTAGATTGCTTGTGATGCTATAGTTTTCTGACTATTTGCAGGCTATTGTATACAACTACCATAGGAACCATCTTATACAATGTGTGATTCGCTAATCGCGATTCAAGAC | |||||||||
gi|192317527|gb|FK011289.1|FK011289 GLQAE79TFB JCVI-SOY2 Glycine max cDNA 5', mRNA sequence GTATAGCATCATGAGCAATCA EST sequence (targeted fragment marked with yellow): GGCATTTTCCAAATTTGATGGCTCTTGATGCTAAATTTATTTCTCTAATTGGTTTCTAGAGCTGTCAAACAAATTTTGTGCACTTTTTTTGTTTTCCTTAGTTTCTTTTGTACTCAGGAAGAAGAGGAAATTCCTTAGTGTTCAAAGTATATAAATGCGATAGTTTTTGCAGCTCAACTTTTGCTCATTGATGTGGTTGCCTAACTTCATTTTAAATGAAGTGGATTTTTGTTTTCTGAACAGCATCTGGTTGTAATATGGAGCAAAGCACTATGGCCATAGTTATCGCAAATGTTGGATGGCATTCTCTGTATCATTGGAATCGCAACAATTCTGATTCCCTAGTATGTACTTTCCTTCCCTTCCCCCCCCCCCTCCTTTGCTAGGGGTTTTGGAATTTGGGGCTTTCCTAATATCCAAATTTCAGTTTTATGAACAACAATGGATCTTGGTTTTAGTTTGGCCGAGTACTGAGATTTTCCTTATTGGTGGTCAATGAAGAAAAAGATGTACATTGCCGAGCCATTATTGTTTAATGTTGATTCTGCCAAGTACACCATTTAGTTGGAGAATTAGGTACCCTGATGAATGATACTCGCACAACGTTTGTTTGTACAAGAAATTTCTGCAACGCGTAGTTTGCGTTTTGATTTTTTGCCATTTACTTTTGCTACTGTCACATTTCTCCCTGTTCCTTGTAAAGAGTGATATGAAAAGTTTTTTGCAAAA | |||||||||
gi|192301763|gb|FG997663.1|FG997663 GLPA087TR JCVI-SOY1 Glycine max cDNA 5', mRNA sequence GTATAGCATCATGAGCAATCA EST sequence (targeted fragment marked with yellow): TTTTTTTTTTTTTTTGGGCATAATGGTAATCAGTTCAATTAATGCTGCTAAAAAAGTAGCATTCAAATGATTAATCACACAATGTTGCATATACATCGAAATATAGCGCATTAATTAGTACCATCATCTTAATTAATTAAGCTAAATGAGAATAAAGAAAACTAATTAAGCTTGATTTCCATGAATTATGAAGTCTTCAAGGGCTTGCAAATACTGTCACGGCTAGCTAGCACACATTTTATTCAGGAATAATGAAGTATAGCATCATGAGCAATCAGCCTTAGATTTTTTTAGCAGATTGACTGCTCATGATGTTATATCATTTCCATGAATTTACCTCTATGCATGCTACCATATTTATATGTATATGCTGCCCCATTTGTAAAAAACTCCTAACGAAAGCCCCCTCCTAGGGCTGGAGCCCAATAATCTGCTCCATTGTCACTTCCAACTTGCAGTGTGCATGACACTGGCACCAGACACAACCCTCTACTCCTCAGCCCCTTCTTTGGTTCTTCTTGAGTATCCGGCTCTCCAGCTGCTTTCCTC | |||||||||
gi|208078448|gb|GD873558.1|GD873558 454GmaGlobSeed616207 Soybean Seeds Containing Globular-Stage Embryos Glycine max cDNA, mRNA GTATAGCATCATGAGCAATCA EST sequence (targeted fragment marked with yellow): AATATTCATGGAGATTGTATAACATCATTAGCAGTCAATCTGCTGCAAAACCTAATTAAGGCTGATTGCTCATGATGCTATACAGCATTCCTGAATAAAATGTATGCTGCCAGTCAAGTAGTATATATTTTGCAAGCCCTTGTGAAGACTCCTTAATTCACGGAAATCAGGCTCTATTTATTTCACTAGCTTAATTAATT | |||||||||
gi|192317069|gb|FK009726.1|FK009726 GLQA557TR JCVI-SOY2 Glycine max cDNA 5', mRNA sequence GTATAGCATCATGAGCAATCA EST sequence (targeted fragment marked with yellow): TTTTTTTTTTTTAGATAAAAGAAAGAGTTAGAATGATTACACATGGTGCTATATCACTATTTTTGTTTTTGTTTCTATTCTATTATTGTAGCACATACATATATAACATATCCCGATGCTATTTGAATTAGGGGGTAAATGCTGTGCACCCGTTGAACACAACTCCAACACAAGACTGGCTTGGCCAAAATTTGGTCATTGAACTCTTTAAGTCAAATTCTCAATTAAACCATATGAAAAATTTTCCCCCTTTGCTTCATTAATTAGTAGTACCTGTTCCTCTATATTTGTACTTAGTGGTCCAATACAAGTAGTGTAGGAAGTTCAACCCACTTAGCACACACATGAGCCAATAGAACTTCTCTAGGTGATAGTGGTTAAAGTTGGCACCGGATAGCCCTGGTTTATTGTGGGTGCCATTTCCAGTGACGCTGTTTACTATAGACACAATCACTGAACTTAGGTAGTACCCCATTGCCAAAGAAGCCCAAGAAAGAGAAGTAGCCAATGATCTCATTCTTATTGGTGCCTCTGTGAAGAAAAATTCCAACAATCCTGCCAAGGTGAAAAGATCAGCAGATCCAAGGAACAAGTACTGAAAAGCAATCCACAAGAATGTGATAGGAAGTGGTTTGGTTGGATCATCAAGTAGCCCTGACTGAGTTGCCACTCTTTTCCTTTTGATTTCAACAATAGCAGCCACTGCCATGGCAACTATGGAGAGTACCAATCCAAAACCAATCCTTTGGAGGTGTGTGATTCCCATTTCTGACTTGGTTGCTTTCCTTGT | |||||||||
gi|193380819|gb|FK346102.1|FK346102 454GmaGlobSeed80734 Soybean Seeds Containing Globular-Stage Embryos Glycine max cDNA, mRNA s GTATAGCATCATGAGCAATCA EST sequence (targeted fragment marked with yellow): AGTACTTTTATTTTTAGATCCTTAACAATTGTCCTTGTAGCATTCGTTAGCATTTGCCTTTTAAAAATTTTGTTGCTCGCCCAAGACGGATACGACGTTGGACTTGTGATGGAGTTAAGACTTTTGCGGAGACAAGAATCAATTGATTGTTTGTGATGCTATTCATTTATTTGTCTTTTCATAGATATTTGTTTATCTAAATGGTAGGAAAAGAGAAGGCTAATTTGCAGTGATTGGATGGTGTCATCAAGAGTATGATACA | |||||||||
gi|192301762|gb|FG997662.1|FG997662 GLPA087TF JCVI-SOY1 Glycine max cDNA 5', mRNA sequence GTATAGCATCATGAGCAATCA EST sequence (targeted fragment marked with yellow): GATTCTGTTCAAGGAGAGAAGACTTGTATATTCCCTGAAGACCCCGGTCAGCTGCTGGATGAAAACTGCTTGAAGAGGAAAGCAGCTGGAGAGCCGGATACTCAAGAAGAACCAAAGAAGGGGCTGAGGAGTAGAGGGTTGTGTCTGGTGCCAGTGTCATGCACACTGCAAGTTGGAAGTGACAATGGAGCAGATTATTGGGCTCCAGCCCTAGGAGGGGGCTTTCGTTAGGAGTTTTTTACAAATGGGGCAGCATATACATATAAATATGGTAGCATGCATAGAGGTAAATTCATGGAAATGATATAACATCATGAGCAGTCAATCTGCTAAAAAAATCTAAGGCTGATTGCTCATGATGCTATACTTCATTATTCCTGAATAAAATGTGTGCTAGCTAGCCGTGACAGTATTTGCAAGCCCTTGAAGACTTCATAATTCATGGAAATCAAGCTTAATTAGTTTTCTTTATTCTCATTTAGCTTAATTAATTAAGATGATGGTACTAATTAATGCGCTATATTTCGATGTATATGCAACATTGTGTGATTAATCATTTGAATGCTACTTTTTTAGCAGCATTAATTGAACTGATTACCATTATG | |||||||||
gi|193623514|gb|FK576908.1|FK576908 454GmaGlobSeed311540 Soybean Seeds Containing Globular-Stage Embryos Glycine max cDNA, mRNA GTATAGCATCATGAGCAATCA EST sequence (targeted fragment marked with yellow): GCTGTAGGAACAAGCGGAATTGCTATATGGACCAACTTGAATGGTTCAGGGGCTGCTCAATGATTAACCATGATGCTATATAACACCCAGTCTTTTCAAGTTTTAAGGGAAGCCTAGTGAACAGCTGCATCAATTTGGTCCTTAATTTGATTAATTTATCTTATAGAAATTAATTTAATAACATTT | |||||||||