| mature miRNA: GTGCTCTCTATACTTCTGTCA species: Glycine max database: miRNEST The numbers on the right side of the alignments show a score calculated for them. When calculating the score, a mismatch is given a score of 1, bulge: 2, and wobble: 0.5. |
| Predicted miRNA targets | |||||||||
gi|208027474|gb|GD826194.1|GD826194 454GmaGlobSeed568843 Soybean Seeds Containing Globular-Stage Embryos Glycine max cDNA, mRNA GTGCTCTCTATACTTCTGTCA EST sequence (targeted fragment marked with yellow): GGACTTTGTGATTGAAGTGTTGACAGAAGATAGAGAGCACAACCTGAGTCAAAGGATCCAGGTTTTGCATCTGTAGAGAGCTTTCGGTTGCTCTTTCCACCCATTGATGGGGCGATGGTGCCATGAATAGGCTGACAAATGGGAGTT | |||||||||
gi|207811915|gb|GD783500.1|GD783500 454GmaGlobSeed526149 Soybean Seeds Containing Globular-Stage Embryos Glycine max cDNA, mRNA GTGCTCTCTATACTTCTGTCA EST sequence (targeted fragment marked with yellow): TGAGTGATAAATTTAATTCTTGTGGTAATGAGACTGCTCCTTTCTTCTTTTTGGTATTTGGAACTGGAAAGTGTTCATTGTACATGTCAGTAGACAAAGCGGCTCTCAATTCCTTTCAAAGGGGGTTATTGTATTTCTTTTCAGTGATTTTGGACACAAACTGATGGAGTGGAGGTGACAGAGGTATAGAGAGCAAGAAGGCCAAGTGCTATGGTAGATATGGATACTTTGTGACTGCTTGTTTTGGACAGAAACAAG | |||||||||
gi|193666446|gb|FK610097.1|FK610097 454GmaGlobSeed344729 Soybean Seeds Containing Globular-Stage Embryos Glycine max cDNA, mRNA GTGCTCTCTATACTTCTGTCA EST sequence (targeted fragment marked with yellow): TGAAGGTTGGTTGTTTTTGCATCGAAAACCAATACTTGACCACTAGGCTTATCTCTTTCCGTTTCTGAGCATGCATACTCATTCACAGCATCAAAATGCACAGATCCTGATGGAGATTGCACAGGGCAGGTGATGCTAGATTGCACCATACTCAACTCTGGACTTTGTGATTGAAGTGTTGACAGAAGATAGAGAGCACAACCTGAGTCAAAGGATCCAGGTTTTGC | |||||||||
gi|308098772|gb|HO760513.1|HO760513 2-7F12.txt SSH cDNA library induced by salt from soybean Glycine max cDNA, mRNA sequence GTGCTCTCTATACTTCTGTCA EST sequence (targeted fragment marked with yellow): CTTTCTCTCTCCATTTTTATTTATATATTTCTCTCCATTATTTGGTGTGCATGCTCTAGACACACACACACCCCACCACCACCAACACTGAGTTTTAGCAGAAGGATAGAGAGCAGAATGATTCAAAGAACTGTGTCCTTTCCCAGTTTAAGGAAATTGCTTCTTCGGGCTGGTTGTTCTAAATCTGCTTCGTCCAAGATCGGAACTTACAATTGCTTTGCTTCTCAGTCCTCCCCTCTACCGAGCCACAACCCTAGTTACCGTGATGACGAGTATGCTGATGTGGACTGGGACAGTCTTGGATTTGGACTGATGCCCACTGATTATATGTATATTACTAAATGTTGTGAGGGCCAAAATTTTGGACAAGGACAACTCAGTCGTTATGGGAACATTGAACTCAGTCCATCAGCTGGTGTCCTAAATTATGGTCAGGGTTTATTCGAAGGCACGAAAGCATACAGAAAAGAAAATGGGGGCTTGCTACTCTTCTGTCCAGAAGAAAATGCCATTCGCATGAAGACTGGTGCCCAAAGAATGTGCATGGCATCGCCTTCCATTGATCATTTTGTTGATGCTTTGAAGCAAACTGTCTTGGCTAATAAGCGTTGGGTTCCTCCACCGGGCAAAGGATCCTTGT | |||||||||
gi|193699836|gb|FK635811.1|FK635811 454GmaGlobSeed370443 Soybean Seeds Containing Globular-Stage Embryos Glycine max cDNA, mRNA GTGCTCTCTATACTTCTGTCA EST sequence (targeted fragment marked with yellow): GCTAGATTGCACCATACTCAACTCTGGACTTTGTGATTGAAGTGTTGACAGAAGATAGAGAGCACAACCTGAGTCAAAGGATCCTAGGTTTTGCATCTGTAGAGAGTCTTTCGGTTGCCTTCCTTTT | |||||||||
gi|193566343|gb|FK524146.1|FK524146 454GmaGlobSeed258778 Soybean Seeds Containing Globular-Stage Embryos Glycine max cDNA, mRNA GTGCTCTCTATACTTCTGTCA EST sequence (targeted fragment marked with yellow): TTTTTGCATCGAAAACCAATACTTAAGAAACCAAACTAAAGGACTTATCTCTTTCCGTTTCTGAGCATGCATACTCATTCACAGCATCAAAATGCACAGATCCTGATGGAGATTGCACAGGGCAGGTGATGCTAGATTGCACCATACTCAACTCTGGACTTTGTGATTGAAGTGTTGACAGAAGATAGAGAGCACAACCTGAGTCAAAGGATCC | |||||||||
gi|207770522|gb|GD742878.1|GD742878 454GmaGlobSeed485527 Soybean Seeds Containing Globular-Stage Embryos Glycine max cDNA, mRNA GTGCTCTCTATACTTCTGTCA EST sequence (targeted fragment marked with yellow): GCATACTCATTCACAGCATCAAAATGCACAGATCCTGATGGAGATTGCACAGGGCAGGTGATGCTAGATTGCACCATACTCAACTCTGGACTTTGTGATTGAAGTGTTGACAGAAGATAGAGAGCACAACCTGAGTCAAAGGATCCAGGTTTTGCNTCTGTAGAGAGCTTTCGGTTGCTCTTTCCATCCATTGATGGGGCGATGGTGCCATGAATA | |||||||||
gi|208152440|gb|GD947543.1|GD947543 454GmaGlobSeed690192 Soybean Seeds Containing Globular-Stage Embryos Glycine max cDNA, mRNA GTGCTCTCTATACTTCTGTCA EST sequence (targeted fragment marked with yellow): AAGGTTGGTTGTTTTTGCATCGAAAACCAATACTTGACCACTAGGCTTATCTCTTTCCGTTTCTGAGCATGCATACTCATTCACAGCATCAAAATGCACAGATCCTGATGGAGATTGCACAGGGCAGGTGATGCTAGATTGCACCATACTCAACTCTGGACTTCGTGATTGAAGTGTTGACAGAAGATAGAGAGCACAACCTGAGTCAAAGGATCCAGGTTTTGCAT | |||||||||
gi|208123964|gb|GD920918.1|GD920918 454GmaGlobSeed663567 Soybean Seeds Containing Globular-Stage Embryos Glycine max cDNA, mRNA GTGCTCTCTATACTTCTGTCA EST sequence (targeted fragment marked with yellow): ATTGAAGTGTTGACAGAAGATAGAGAGCACAACCTGAGTCAAAGGATCCAGGTTTTGCATCTGTAGAGAGCTTTCGGTTGCTCTTTCCACCCATTGATGGGGCGATGGTGCCATGAATAGGCTGACAAATGGGAGTTCCCGGCG | |||||||||
gi|192313656|gb|FK010272.1|FK010272 GLQA866TF JCVI-SOY2 Glycine max cDNA 5', mRNA sequence GTGCTCTCTATACTTCTGTCA EST sequence (targeted fragment marked with yellow): GGATGCTCTAGACACACACACACCACACCACCACCAACACTGAGTTTTAGCAGAAGGATAGAGAGCAGAATGATTCAAAGAACTGTGTCCTTTCCCAGTTTAAGGAAATTGCTTCTTCGGGCTGGTTGTTCTAAATCTGCTTCGTCCAAGATCGGAACTTACAATTGCTTTGCTTCTCAGTCCTCCCCTCTACCGAGCCACAACCCTAGTTACCGTGATGACGAGTATGCTGATGTGGACTGGGACAGTCTTGGATTTGGACTGATGCCCACTGATTATATGTATATTACTAAATGTTGTGAGGGCCAAAATTTTGGACAAGGACAACTCAGTCGTTATGGGAACATTGAACTCAGTCCATCAGCTGGTGTCCTAAATTATGGTCAGGGTTTATTCGAAGGCACGAAAGCATACAGAAAAGAAAATGGGGGCTTGCTACTCTTCCGTCCAGAAGAAAATGCCATTCGCATGAAGACTGGTGCCCAAAGAATGTGCATGGCATCGCCTTCCATTGATCATTTTGTTGATGCTTTGAAGCAAACTGTCTTGGCTAATAAGCGTTGGGTTCCTCCACCGGGCAAAGGATCCTTGTACCTTAGGCCTCTGCTCCTAGGAACTGGTCCGGTTTTGGGTTTGGCTCCTGCACCTGAATACACATTCCTCATATTTGCTTCCCCTGTTCGCAACTATTTCAAGGAGGGCTCTGCTCCACTCAACTTGTA | |||||||||
gi|193477841|gb|FK440078.1|FK440078 454GmaGlobSeed174710 Soybean Seeds Containing Globular-Stage Embryos Glycine max cDNA, mRNA GTGCTCTCTATACTTCTGTCA EST sequence (targeted fragment marked with yellow): GTAATGAAGGTTGGTTGTTTTTGTCATCGAAAACCAATACTTGACCACTAGGCTTATCTCTTTCCGTTTCTGAGCATGCATACTCATTCACAGCATCAAAATGCACAGATCCTGATGGAGATTGCACAGGGCAGGTGATGCTAGATTGCACCATACTCAACTCNGGACTTTGTGATTGAAGTGTTGACAGAAGATAGAGAGCACAACCTGAGTCAAAGGATCCAGGTTTTG | |||||||||
gi|213597188|gb|DB981580.1|DB981580 DB981580 full-length enriched soybean cDNA library, mixture of seedling, young plant, adult GTGCTCTCTATACTTCTGTCA EST sequence (targeted fragment marked with yellow): CTGAACTGTTCAAACTGATCTCATGACAACTGAAAGAACATAGTTCGCATACAATCCATTTCATCCTCCGCAGCATAATCAATTGTGCTACCACAACAAGATTGACAGCAACAAAGGACCCTTATTGAAAGCTTCAACAAGTTTAAGCTTTAATCATTGGAGTACACAGTACACACACAAGGTTTTGAATCCATAATTTCCCAACAAAGACATAACCACTTAGTTAGCTACCTACTCCCACAAGAAAGGAAGTGCTAGTGGGTCCTCATTTTCAACAAATCCATCGAGATCCATTTGCAGCATTCCGTTGTAATGAAGGTTGGTTGTTTTTGCATCGAAAACCAATACTTGACCACTAGGCTTATCTCTTTCCGTTTCTGAGCATGCATACTCATTCACAGCATCAAAATGCACAGATCCTGATGGAGATTGCACAGGGCAGGTGATGCTAGATTGCACCATACTCAACTCTGGACTTTGTGATTGAAGTGTTGACAGAAGATAGAGAGCACAACCTGAGTCAAAGGATTCAGGTTTTGCATCTGTAGAGAGCTTTCGGTTGCTCTTTC | |||||||||
gi|207765578|gb|GD736383.1|GD736383 454GmaGlobSeed479032 Soybean Seeds Containing Globular-Stage Embryos Glycine max cDNA, mRNA GTGCTCTCTATACTTCTGTCA EST sequence (targeted fragment marked with yellow): ATCGAAAACCAATACTTTGACCACTAGGCTTATCTCTTTCCGTTTCTGAGCATGCATACTCATTCACAGCATCAAAATGCACAGATCCTGATGGAGATTGCACAGGGCAGGTGATGCTAGATTGCACCATACTCAACTCTGGACTTTGTGATTGAAGTGTTGACAGAAGATAGAGAGCACAACCTGAGTCAAAGGATCCAGGTTTTGCAT | |||||||||
gi|192323977|gb|FK015698.1|FK015698 GLNC356TF JCVI-SOY3 Glycine max cDNA 5', mRNA sequence GTGCTCTCTATACTTCTGTCA EST sequence (targeted fragment marked with yellow): GGAATTTAATTCGAGCTAATTTGCTAAAGTACCAGCAAAATGTATCCTGCAGTAGATGAACATGAAGAGGTATACGCAGCTCATCATAGACATCCAGGTTATGTTCTACCAGTTGTGGTGCCTCCAAATTATGGCACTCCACAAATTCCATCCTATGCTCCTCCATACATCAGCACCAGTGTTAGTGTAAGGGGCCCTGTGATCAGGACAAATCGATGGTCAACCAATTTGTGCCATTGTACTGAGGATCCTGGAAACTGTTTGGTCACTTGCTTCTGCCCCTGTGTTACATTTGGATTGATAGCAGAGATAGTAGATAAAGGCAATACAACTTGCACTTATGCTGGGGCTATTTATGGGACGCTACTGGCTCTTAGCGGGCTTTCATGCTTGTATTCTTGCTATTATAGGTCCAAACTGAGGGCACAATATGACTTACCAGAGGCTCCATGTATGGATTGTTTAGTTCATTTCTGCTGTGAAACATGTGCTCTATGTCAGGAGTATAGAGAGCTTAAAAACCGTGGATTTGACTTGAGCATAGGGTGGGAAGCCAACATGGAAAGACAAAGACAAGGAGCTATAGTATCACCAGTAATGTCACAATCTATGACAAGATGAAAAGTGAAACCTCTTTAGGATCCTTTTGGTCACTACCTTGAGATGGAGCTGTTGGTTAATTGGTGCTGTTAATTTCAACTCCTTGTGGTGTATATAATCTGTTCGATGCTTGGTTTGAGTTTTTTTA | |||||||||
gi|193382100|gb|FK345759.1|FK345759 454GmaGlobSeed80391 Soybean Seeds Containing Globular-Stage Embryos Glycine max cDNA, mRNA s GTGCTCTCTATACTTCTGTCA EST sequence (targeted fragment marked with yellow): TGCACAGATCCTGATGGAGATTGCACAGGGCAGGTGATGCTAGATTGCACCATACTCAACTCTGGACTTTGTGATTGAAGTGTTGACAGAAGATAGAGAGCACAACCTGAGTTAAAGGATCCAGGTTTTGCATCTGTAGAGAGCTTTCGGTTGCTCTTTCC | |||||||||
gi|208225979|gb|GE022660.1|GE022660 454GmaGlobSeed765308 Soybean Seeds Containing Globular-Stage Embryos Glycine max cDNA, mRNA GTGCTCTCTATACTTCTGTCA EST sequence (targeted fragment marked with yellow): AAGGTTGGTTGTTTTTGCTATCGAAAACCAATACTTGACCACTAGGCTTATCTCTTTCCGTTTCTGAGCATGCATACTCATTCACAGCATCAAAATGCACAGATCCTGATGGAGATTGCACAGGGCAGGTGATGCTAGATTGCACCATACTCAACTCTGGACTTCGTGATTGAAGTGTTGACAGAAGATAGAGAGCACAACCTGAGTCAAAGGATCCAGGTTTTGCAT | |||||||||
gi|193696351|gb|FK639289.1|FK639289 454GmaGlobSeed373921 Soybean Seeds Containing Globular-Stage Embryos Glycine max cDNA, mRNA GTGCTCTCTATACTTCTGTCA EST sequence (targeted fragment marked with yellow): AAGTGTTGACAGAAGATAGAGAGCGCAACCTGAGTCAAAGGATCCAGGTTTTGCATCTGTAGAGAGCTTTCGGGTGCTCTTTCCACCCGTTGATGGGGCAATGGTGCCATGAATAGGCTGACAAATGGGAGTTCCCGGCG | |||||||||
gi|193706592|gb|FK643635.1|FK643635 454GmaGlobSeed378267 Soybean Seeds Containing Globular-Stage Embryos Glycine max cDNA, mRNA GTGCTCTCTATACTTCTGTCA EST sequence (targeted fragment marked with yellow): GGTCTAAAGAAAAATAAATTTCTGAACTGTTCAAACTGATCTCAAGACAACTGAAAGAACATAGTTATCGGCATACAATCGATTTCATCATCCGCCGCATAATCAATTGTGCTACCACAACAAGATTGACAGAAGATAGAGAGCACAACCTGAGTCAAAGGATCCAGGTTTTGCATCTGTAGAGAGCTTTCGGGTGCTCTTTCCACCCGTTGATGGGGCAATGGTGCCA | |||||||||
gi|208281944|gb|GE080168.1|GE080168 454GmaGlobSeed822816 Soybean Seeds Containing Globular-Stage Embryos Glycine max cDNA, mRNA GTGCTCTCTATACTTCTGTCA EST sequence (targeted fragment marked with yellow): CAGCATTCCGTTGTAATGAAGGTTGGTTGTTTTTGCATCGAAAACCAATACTTGACCACTAGGCTTATCTCTTTCCGTTTCTGAGCATGCATACTCATTCACAGCATCAAAATGCACAGATCCTGATGGAGATTGCACAGGGCAGGTGATGCTAGATTGCACCATACTCAACTCTGGACTTTGTGATTGAAGTGTTGACAGAAGATAGAGAGCACAA | |||||||||
gi|208173701|gb|GD966416.1|GD966416 454GmaGlobSeed709065 Soybean Seeds Containing Globular-Stage Embryos Glycine max cDNA, mRNA GTGCTCTCTATACTTCTGTCA EST sequence (targeted fragment marked with yellow): CAAAAATGCACAGATCCTGATGGAGATTGCACAGGGCAGGTGATGCTAGATTGCACCATACTCAACTCTGGACTTTGTGATTGAAGTGTTGACAGAAGATAGAGAGCACAACCTGAGTCAAAGGATCCAGGTTTTGCATCTGTAGAGAGCTTTCGGTTGCTCTTTCCACCCATTGATGGGGCGATGGTGCCATGAATAGGCTGACAAATGGGAGTTCCCGGCCGTAATGG | |||||||||
gi|193635328|gb|FK584753.1|FK584753 454GmaGlobSeed319385 Soybean Seeds Containing Globular-Stage Embryos Glycine max cDNA, mRNA GTGCTCTCTATACTTCTGTCA EST sequence (targeted fragment marked with yellow): TGAATACTCATTCACAGCATCAAAATGCACAGATCCGGATGGAGATTGCATTGGACAGGTGATGCTAGATTGCGCCATACTCAACTCTGGACTTTGTGACTGAAGTGTTGACAGAAGATAGAGAGCACAACCTGAGTCAAAGGATCCAGGTTTTGCATCTGTAGAGAGCTTTCGGGTGCTCTTTCCACCCGTTGATGGGGCAATGGTGCCATGAATAGG | |||||||||
gi|207835835|gb|GD809220.1|GD809220 454GmaGlobSeed551869 Soybean Seeds Containing Globular-Stage Embryos Glycine max cDNA, mRNA GTGCTCTCTATACTTCTGTCA EST sequence (targeted fragment marked with yellow): CAGCATTCCGTTTGTAATGAAGGTTGGTTGTTTTTGCATCGAAAACCAATACTTGACCACTAGGCTTATCTCTTTCCGTTTCTTGAGCATGCATACTCATTCACAGCATCAAAATGCACAGATCCTGATGGAGATTGCACAGGGCAGGTGATGCTAGATTGCACCATACTCAACTCTGGACTTTGTGATTGAAGTGTTGACAGAAGATAGAGAGCACAA | |||||||||
gi|208178192|gb|GD975765.1|GD975765 454GmaGlobSeed718414 Soybean Seeds Containing Globular-Stage Embryos Glycine max cDNA, mRNA GTGCTCTCTATACTTCTGTCA EST sequence (targeted fragment marked with yellow): GTTGTAATGAAGGTTGGTTGTTTCTGCATCGAAAACCAATACTTGACCACTAGGCTTATCTCTTTCCGTTTCTGAGCATGCATACTCATTCACAGCATCAAAATGCACAGATCCTGATGGAGATTGCACAGGGCAGGTGATGCTAGATTGCACCATACTCAACTCTGGACTTTGTGATTGAAGTGTTGACAGAAGATAGAGAGCACAACCTGAGTCAAAGGATCCTAGG | |||||||||
gi|213603341|gb|DB966600.1|DB966600 DB966600 full-length enriched soybean cDNA library, mixture of seedling, young plant, adult GTGCTCTCTATACTTCTGTCA EST sequence (targeted fragment marked with yellow): GAGAGACAATTTTTGTGATAATGAATAACACAGTTCAGCACAATTCGACCATATTTGGTTTCTTGAATGTATAGCCAGTTTAATTAATGGGACACTGGTGCTTATCAAACTTGGGATTTTCTGGCTGCTGTGGCACTAATTCTTCAAAGAGAAAAATCTCAAAGGATCAGCATTATAACACTGGTGAAGATAAGAAAGTAATTGGCAGAGAAATGGAGAGCACACTGAAGGCCTTGAGAGATGGAGAGTCGGTGTTGGACCTCAGCCCAAGATCCACCGTCAGTGGCGGCGTTGAGGACATCTACGGCGAGGATCGCGCCACCGAGGATCAACTTGTTACCCCATGGATTTTCTCGGTTGCCAGTGGGTACTCTTTGCTACGAGATCCACAGTACAACAAAGGGCTATCTTTCACTGAGAAAGAGAGGGATGCACACTATTTGCGTGGGCTCCTGCCTCCCACAGTCAGCACTCAGCAACTTCAGGAGAAGAAACTGATGAACAGCATCAGGCAATATCAGGTTCCCTTGCAAAAGTACGTGGCCATGATGGACCTTCAGGAGAGGAATGAAAGGCTATTTTACAAACTTCTCATTG | |||||||||
gi|207700156|gb|GD682129.1|GD682129 454GmaGlobSeed424778 Soybean Seeds Containing Globular-Stage Embryos Glycine max cDNA, mRNA GTGCTCTCTATACTTCTGTCA EST sequence (targeted fragment marked with yellow): GCATTCCGTTGTAATGAAGGTTGGTTGTTTTTGCATCGAAAACCAATACTTGACCACTAGGCTTATCTCTTTCCGTTTCTGAGCATGCATACTCATTCACAGCATCAAAATGCACAGATCCTGATGGAGATTGCACAGGGCAGGTGATGCTAGATTGCACCATACTCAACTCTGGACTTTGTGATTGAAGTGTTGACAGAAGATAGAGAGCACAACCTGAGTCAAAGGA | |||||||||