| mature miRNA: TCTCATTCCATACATCGTCTG species: Glycine max database: miRNEST The numbers on the right side of the alignments show a score calculated for them. When calculating the score, a mismatch is given a score of 1, bulge: 2, and wobble: 0.5. |
| Predicted miRNA targets | |||||||||
gi|151398329|gb|EV268200.1|EV268200 GLMA366TF JCVI-SOY2 Glycine max cDNA 5', mRNA sequence TCTCATTCCATACATCGTCTG EST sequence (targeted fragment marked with yellow): GGGTTGATGATGAATGGAGTGAGAAAAAGAGATTAGAGAGAGAGAGAGAGAGGAGACGAATGAGACAAGATAGCTGAACATAAAGGTGAGGTTACGTGTATCTCTTGAAGTAGTGCCATGCCACCCCATCAATAATAAGATCACTCAATCACCAATGCATCATCGTTGTTGGAATTCCAGCGCTGTGTTTGGAAATTGGAACTGGAGGGGCTTCAGGTGCCATAATCTCAACCTTAGATAACAGATTATTGCACAGCAAAAACCTTGTAAAAGGAGAATTAGAATCACCTCTCTCTAAGGATGTTGGAAGGAAAGGCTATGGTGAAAGAAACAGACATGTCAACCAAGATGCAGATCCATGCCATGGCCTCTGCTTCTCAGGCCCTTGATCTCTACGATGTTTATGATTGCATCTCTATTGCTGCCCATATCAAGAAGGAATTTGATAGTGTGTACGGGAATGGGTGGCAATGTGTGGTAGGATCCAATTTTGGGTGCTATTTCACCCATTCATCAGGGACTTTCATCTATTTTGCTCTGGCGACTCTTAATTTTCTTATCTTCAAGGGAACATCTTCTTGATTTATGTTAAAAGTGCAATCTGAGATAGAATACAGGGTTTGGTTATTAGAGAATAGAGAAGCATCCATATGCAGATAAGTTTTTAATTGATCCCTCTTGATCTGATCTTGCTTCCATGCACCATCAGAATATTTTAGATGTTACAGCTTTGAATGGAAGAACTATGTATGATGGCTGTTGAAGTGTTTTCATCATCTTGTCTCTCAAATGGAACTTTTCGACGACTCTGGATTCACCTATGCGAATACGTGTATCAATCGAACTG | |||||||||
gi|254325505|gb|GR838386.1|GR838386 CCCC964.g1 CCCC Glycine max callus grown in dark condition Glycine max cDNA clone CCCC964 3' TCTCATTCCATACATCGTCTG EST sequence (targeted fragment marked with yellow): CACTTTCCTAACCCTAAGAGCTGTGAAGACGTTTCGGAGTGTGAACCGATGGATCCGTCGCGTCAAACATCCTCGCCGGTGGCGCGGCAACGTTATCGGTTTTTTGATTTCGTTGCAGCCATCCATGGCGGTGTTGTTTTTTAACGACCGATCTCATTGCTGTGCCAGATCTGAGCCTCACCAAATCCCTAACTGAAGATCTCTCCTTCGCTGACGTTATCTTAACGCAATGTTTGACAGAGATGTATGGAGTGAGAGAAGGGAAATGATATTTTCCGATCCCATCGTTACTCTCTTCCCTCTCTCATTCCATACATCGTCTGACGAACCTAGCGTTGATTTGTTCTGCATGTTTAGTTTACTGTTTGTTTCAGCCTAGAAAGCTTTATTTTCTTCCCGTGAAAGTAATGAATGTCTGTTGTTACTTATTTTTTCTAATTTCTGATGTTTGTTGATGTTGAAATATTGTGTCATGCAAGCAGCTCTTATGGCAGGATTAGCTTCATTAAGGACTGGTGCGTAAATGCTCTGAAATTCGGTAGTAATGTTCTGCTTTTGGTGATGAACTTGAGTCATGTGTTAACACTAGTTATCGTGTGTTAAGCGATTTATAGAACTGGGAGAATGATTTTTGTACT | |||||||||
gi|254341279|gb|GR855007.1|GR855007 CCCC20011.b1 CCCC Glycine max callus grown in dark condition Glycine max cDNA clone CCCC2001 TCTCATTCCATACATCGTCTG EST sequence (targeted fragment marked with yellow): CCCTGGCCATGCATGCCCATTGTAGGTGCTTTGTGGGCTCAGAAGGTGAAGCGCTGGAGTGACTTTTTTGTATTCTCTGCTTCTGCAACTGTATTCCACCATAGCAGGGATGCCGTAGTTCAGCTCTTAAGAAGTTGCTTCGCCTCCACCCTTGGGCTTGGTTCCGCCTGCATTTATAACAATGGTGGTGTTGGCACCCTCCTTGGTCATGGCTTTGGTTCTCACTACTCCGGAGGGTTCACTCCGGTTGCTCCTGGGTTTCTCTACTTAAGAGTTTACAGGTCTATTAGAGATGTGATGTTCTTGACAGATGAAATTGTATCTCTTTTAATGCTTTCAGTTAGAGATATAGCAAATGGTGGGTTGCCCAAGGGTGAAGTGGAGAAGCTAAAGAAGACTAAGTATGGAATGAGATATGGACAGGTTTCTCTTTCTGGATCGATGACACGTGTTAAGCATGCCGCTCTTCTTGGGGCTTCGTTTCTTTGGATATCTGGTGGTTCAGGTTTGGTTCAATCTTTGATTACAGAAACTCTGCCTTCATGGTTTTTATCAGCCCAAGGGTTAGAGCAGGAAGGGGGAGAATCTGGAGTTGTGGTTGCTATGCTGAGAGGTTATGCACTTGCATGTTTTGCGGTACTTGGTGGGACATTTGCCTGGGGTATCGACTCTTCGTCACCAGCATCAAAACGACGGCCAAAGGTCCTTGAGATTCATTTAGAATTTCTTGCAAATGCACTAGATGGAAAATATCTCTTCGCTGTGATTGTGCTACTTGGC | |||||||||
gi|151399240|gb|EV269111.1|EV269111 GLMAF47TF JCVI-SOY2 Glycine max cDNA 5', mRNA sequence TCTCATTCCATACATCGTCTG EST sequence (targeted fragment marked with yellow): GGGTTGATGATGAATGGAGTGAGAAAAAGAGATTAGAGAGAGAGAGAGAGAGGAGACGAATGAGACAAGATAGCTGAACATAAAGGTGAGGTTACGTGTATCTCTTGAAGTAGTGCCATGCCACCCCATCAATAATAAGATCACTCAATCACCAATGCATCATCGTTGTTGGAATTCCAGCACTGTGTTTGGAAATTGGAACTGGAGGGGCTTCAGGTGCCATAATCTCAACCTTAGATAACAGATTATTGCACAGCAAAAACCTTGTAAAAGGAGAATTAGAATCACCTCTCTCTAAGGATGTTGGAAGGAAAGGCTATGGTGAAAGAAACAGACATGTCAACCAAGATGCAGATCCATGCCATGGCCTCTGCTTCTCAGGCCCTTGATCTCTACGATGTTTATGATTGCATCTCTATTGCTGCCCATATCAAGAAGGAATTTGATAGTGTGTACGGGAATGGGTGGCAATGTGTGGTAGGATCCAATTTTGGGTGCTATTTCACCCATTCATCAGGGACTTTCATCTATTTTGCTCTGGCGACTCTTAATTTTCTTATCTTCAAGGGAACATCTTCTTGATTTATGTTAAAAGTGCAATCTGAGATAGAATACAGGGTTTGGTTATTAGAGAATAGAGAAGCATCCATATGCA | |||||||||
gi|254342877|gb|GR859039.1|GR859039 CCCC22500.g1 CCCC Glycine max callus grown in dark condition Glycine max cDNA clone CCCC2250 TCTCATTCCATACATCGTCTG EST sequence (targeted fragment marked with yellow): AGATGGTTTCGGAGTGTGGACCCGATGGATCTGCCGCCGTCAAACCTCCTCGCCGGTGGCGCGGCAACTTTATCGCTTTTGATTTTGTTGCAGCCATCCCTGGCGGTGTTGTTTTTCGATGACCGATACCATCGCTGTGCCAGATCTGAGCCTCACCAATTCCCTAATCTAAGAACTCTCCCTCATTGGCGTTGTCTTAACGCAGTGTTTGGCAGAGGTGTATGGAGTGAGAGAAGGGAAAGGGTATTTTCCGATTCTGTCGTTACTCTCTTCCCTCTCTCATTCCATACATCGTCTGACGAACGTATCGTTGATTGGTTCTGCATGGTTGCATTTTCTGTTTGTTTTTAGCCTTACTTTTTTTCCCGTTAAAGTAACTTATGAGTATCTGTGGTTACTTCATTTCTAATTTCTTATGTTTATGAGTATCTGTGGTTTCTTCATTTCTAATTTCCCCAGGTTAGACGAGGGAGGGAAGACTATCATGTGAGAGAGACTCACACTGGATTATAAGGGTGAGTTGAAGTCGCAATTCCGACAAAAGTGGACTAGAGTAATGATCTGCTTTTGGGTGATGAACTGGAGTCATGTGTTAACACTAGTATTTTGTGTTTGAGCGATCTATAGAACTAGGAGAATGATTTTTGTACTAGCACTTTAATTATTTTGTCAAACAATAATCTTACCAGAGTTTACATTTTTT | |||||||||