miRNEST 2.0: an integrative microRNA resource miRNEST 2.0, an integrative microRNA resource :: Browse




mature miRNA: TCTCATTCCATACATCGTCTGA
species: Glycine max
database: miRNEST
The numbers on the right side of the alignments show a score calculated for them.
When calculating the score, a mismatch is given a score of 1, bulge: 2, and wobble: 0.5.

Predicted miRNA targets
gi|254325505|gb|GR838386.1|GR838386 CCCC964.g1 CCCC Glycine max callus grown in dark condition Glycine max cDNA clone CCCC964 3'

TCTCATTCCATACATCGTCTGA
|||||.|||||||||| ||||
AGAGTGAGGTATGTAG-AGACA

EST sequence (targeted fragment marked with yellow):
CACTTTCCTAACCCTAAGAGCTGTGAAGACGTTTCGGAGTGTGAACCGATGGATCCGTCGCGTCAAACATCCTCGCCGGTGGCGCGGCAACGTTATCGGTTTTTTGATTTCGTTGCAGCCATCCATGGCGGTGTTGTTTTTTAACGACCGATCTCATTGCTGTGCCAGATCTGAGCCTCACCAAATCCCTAACTGAAGATCTCTCCTTCGCTGACGTTATCTTAACGCAATGTTTGACAGAGATGTATGGAGTGAGAGAAGGGAAATGATATTTTCCGATCCCATCGTTACTCTCTTCCCTCTCTCATTCCATACATCGTCTGACGAACCTAGCGTTGATTTGTTCTGCATGTTTAGTTTACTGTTTGTTTCAGCCTAGAAAGCTTTATTTTCTTCCCGTGAAAGTAATGAATGTCTGTTGTTACTTATTTTTTCTAATTTCTGATGTTTGTTGATGTTGAAATATTGTGTCATGCAAGCAGCTCTTATGGCAGGATTAGCTTCATTAAGGACTGGTGCGTAAATGCTCTGAAATTCGGTAGTAATGTTCTGCTTTTGGTGATGAACTTGAGTCATGTGTTAACACTAGTTATCGTGTGTTAAGCGATTTATAGAACTGGGAGAATGATTTTTGTACT