| mature miRNA: TGCCAAAGGAGAGCTGCCCTG species: Glycine max database: miRNEST The numbers on the right side of the alignments show a score calculated for them. When calculating the score, a mismatch is given a score of 1, bulge: 2, and wobble: 0.5. |
| Predicted miRNA targets | |||||||||
gi|151411183|gb|EV280994.1|EV280994 GLNAZ77TF JCVI-SOY3 Glycine max cDNA 5', mRNA sequence TGCCAAAGGAGAGCTGCCCTG EST sequence (targeted fragment marked with yellow): GGAACACTACAAGTTCCCATCTTCACCACGAAGCATTCTTAGCATTCTACAGAGAGAAAAGTGACACTCTACAATGGTTCCAAAGCTTAGTGGTGACGTGGATGATGGTGGAACTGGGCTTGAAACTAAGCCTATCTGAACAATACCCTCCTCTTCCTTCTTCTATTAAGGTTGAAGTTCTTAGATAAGAAGAAGAAGAGAGCATAAGATAGCCTTTTGAAGCTGAAAGCAAATTTTGTGAAGTAGCATATATACTTTCAATTTGTTTAGTTCTTCTGGGTGGAGTTCCTTCATTTGGTGTTTGTAGTCATGGAGGTTTCTTGGTTCTATACCTTTTGCAGCTTTTTATGGATCCAACCATCCCAAATGTGCCAATGGTTCAAAAGAAATGATATGATAACAGAAGCTCATCTCCTTTGTTACCAGATTGACCTGATTGAGTGTTAGACTTATTTGTAGAGGCAGATCTCCTTTGGAAGTGTAACCCTCAATATTGGAAAATGAAGCTTCATCTATTTCAGATATCTATTTATGATTGAAGATTCAGCTGTACCGGGCAAATCTTCTTTGGCAAAAGTTACTTAATTTTCCTTTGGTTGGATACTTGGATTCCAAGTAGTAAAAATATATCAACATTATTTTTTTGCCTTCTTAAAATATTACCATTCAGAGATAATTTCTCTAGGAACTCCACCCTTTCTTGGGGGGCAAATCTCCTTTGGCATCTTTTGCTTATCTTGGTCTGTTTCCTCCAATAGCCAGAATTTTTTTCTTTCTGTAAACCACC | |||||||||
gi|151408325|gb|EV278133.1|EV278133 GLNA330TF JCVI-SOY3 Glycine max cDNA 5', mRNA sequence TGCCAAAGGAGAGCTGCCCTG EST sequence (targeted fragment marked with yellow): TTTTGGAAGTGTAACCCCTCAATATTGGAAAATGAAGCTTCATCTATTTCAGATATCTATTTTATGATTTGAAGATTCAGCTGTACTGGGCAAATCTTCTTTGGCAAAAGTTACTTAATTTTCC | |||||||||
gi|209722474|gb|BW682824.1|BW682824 BW682824 GMFL01 Glycine max cDNA clone GMFL01-49-P10 3', mRNA sequence TGCCAAAGGAGAGCTGCCCTG EST sequence (targeted fragment marked with yellow): GCCAGATCTTGGGAGGAGATTGAGAGAGGATTTTGATTTAGTCCCGTCTAATGTACAGTGGATAACAGCTTGGTCCATAACGAAAAAGGACCTAAATACTGATTCATTTCCATTTCTGAAGACAATTGCTAAGGCCTCAGGCTGGCCATTGAACCGCTATCAGACCTTGGCATTGCTCATCTTTTCATCAGTCTTAGCATTGGATCTGTGGTTCTGGGAGCTCTTCTTTGGCACTGCAGTGAATTGGGTCTCTGAACTTGGCTCAGAACTTCTTCAGTATGTTGATAATTCACAGATGATATGATCATTGGACTCGGAAAATTCATACTAATTGCTAAATAGGATGAAGAAATCTTATATATGCCACTGTAAACATCAAAAGCTTTTTAATTTTTATTGACAAATATAAAATTCCAGATGTTCCC | |||||||||
gi|193317193|gb|FK278597.1|FK278597 454GmaGlobSeed13229 Soybean Seeds Containing Globular-Stage Embryos Glycine max cDNA, mRNA s TGCCAAAGGAGAGCTGCCCTG EST sequence (targeted fragment marked with yellow): GTAGACCAAGGTGGTTCTCCTATGGCATCTGATAATTTAAAATTAAGCACTAGAGGTGTTGAATACCAATATCTAAAGACGAGTAGGTTTCATGTGCCATGGGACAAGATATTTCTTTGATGGA | |||||||||
gi|192301681|gb|FG994389.1|FG994389 GLLED62TF JCVI-SOY1 Glycine max cDNA 5', mRNA sequence TGCCAAAGGAGAGCTGCCCTG EST sequence (targeted fragment marked with yellow): GGAGTGTGTAACCAATTCTTCTCTTTTGCTTTCTCTCTCCAAATTCATCACAACTTCTCTCGTACCTCTGCAGAGAAGTAAACATATAGGAGTGAGAGGGAGGGAGAGAGAAGGAAAGCTTGGTAGCGATGGGGAAGGAGCAAGTTCAGGTGCTGAATGCCCTGGACGTGGCAAAGACACAATGGTATCATTTCACAGCAATCATCATTGCTGGAATGGGCTTCTTCACTGATGCTTATGATCTGTTCTGTATATCACTAGTCACAAAGCTACTTGGTCGCATTTACTACCACGTTGATGGGGCTGCAAAGCCTGGTTCATTGCCTCCCAATGTGTCAGCTGCAGTTAATGGTGTAGCTTTTGTTGGAACACTTTCAGGGCAACTCTTCTTTGGCTGGCTCGGCGACAAAATGGGCCGAAAAAAGGTCTATGGCATGACCCTTGCGCTTATGGTTATAGCTTCCATTGCTTCGGGTCTATCCTTCGGACACGATGCAAAGACTGTGATGACAACTCTATGCTTCTTTCGCTTCTGGCTTGGTTTTGGCATTGGTGGAGACTACCCTCTTTCGGCCACCATAATGTCTGAGTATTCTAATATGAAGACTCGAGGTGCCTTTATAGCTGCAGTGTTTGCCATGCAGGGTTTTGGAATTTTG | |||||||||
gi|213611753|gb|DB960653.1|DB960653 DB960653 full-length enriched soybean cDNA library, mixture of seedling, young plant, adult TGCCAAAGGAGAGCTGCCCTG EST sequence (targeted fragment marked with yellow): GGACAAAGTAGCAAAGGTGTAGACACAGTTTATAGGGAGCAAGGGAGTGAGTGATCAGAGGGACTTGTGTTCATTAGTAAGTAAGCAAATCATTCATAGGGCATGTCTCTTTTGGCAGGTAATGGTGATTACTTTGGATTAATTCAGAGCTACCAAAATATGTCTCATAAATAGTAATCAACTTGCCAAAGGAGAGCTGCCCTGTGAGTGTTTGACTTAAACATTTGTTTCCTTTGCCCCTGCATGCAGTGCAACTACATACTGAAAAAGGTAATGTAGTGTAAGTGAGCTTAATTTGCAAATAATTCGTTATCAGCTTGATAGAAATATTTTTGTTTTTTGTGGGCAGGTTGATAGAAATTTAGGTAGAAATTAAAGACAAAATCACTTGACTTCCCAATGAATTTTTTTATTAATAGAAAACACTACATTATAAGATTATCAAATTTAGGTAGAAAGAAATGATGATTTTATAATGTAATGTTTGCATTAATATTTTGTTGGGAAGTCAAGTGAATTTGTCTTTAATTTTCTTTTGAGTCCAAACTTGTTTGCATAGAAAAATCACTACTTTTAGTTATCAATACTTGAC | |||||||||
gi|192323389|gb|FK017435.1|FK017435 GLNCN40TF JCVI-SOY3 Glycine max cDNA 5', mRNA sequence TGCCAAAGGAGAGCTGCCCTG EST sequence (targeted fragment marked with yellow): GGACACTAACACTACAAGTTCCCATCTTCACCACGAAGCATTCTTAGCATTCTACAGAGAGAAAAGTGACACTCTACAATGGTTCCAAAGCTTAGTGGTGACGTGGATGATGGTGGAACTGGGCTTGAAACTAAGCCTATCTGAACAATACCCTCCTCTTCCTTCTTCTATTAAGGTTGAAGTTCTTAGATAAGAAGAAGAAGAGAGCATAAGATAGCCTTTTGAAGCTGAAAGCAAATTTTGTGAAGTAGCATATATACTTTCAATTTGTTTAGTTCTTCTGGGTGGAGTTCCTTCATTTGGTGTTTGTAGTCATGGAGGTTTCTTGGTTCTATACCTTTTGCAGCTTTTTATGGATCCAACCATCCCAAATGTGCCAATGGTTCAAAAGAAATGATATGATAACAGAAGCTCATCTCCTTTGTTACCAGATTGACCTGATTGAGTGTTAGACTTATTTGTAGAGGCAGATCTCCTTTGGAAGTGTAACCCTCAATATTGGAAAATGAAGCTTCATCTATTTCAGATATCTATTTATGATTGAAGATTCAGCTGTACTGGGCAAATCTTCTTTGGCAAAAGTTACTTAATTTTCCTTTGGTTGGATACTTGGATTCCAAGTAGTAAAAATATATCAACATTATTTTTTGCCTTCTTAAAATATTACCATTCAGAGATAATTTCTCTAGGAACTCCACCCTTTCTTGGGGGGCAAATCTCCTTTGGCATCTTTTGCTTATCTTGGTCTGTTTCCTCCATAGCCAGAATTTTTTCTTTCTGTAAACCACC | |||||||||
gi|298196815|gb|HO041558.1|HO041558 ocpsga0_0431_D05.ab1 Soybean immature seed full-length-enriched cDNA library Glycine max cDN TGCCAAAGGAGAGCTGCCCTG EST sequence (targeted fragment marked with yellow): GGGGGGAACACAAGATGGAAAGTCGTGTTGTTGATGAGAGGAAGAGGGTTGTTATGGTCAAGGAAGAGAACAGCACTTCTTCTCCCAACAGTGTTGAACTTCATCTCGGGTTTGATGCTTCTCATTCGACTCCACAAGAAATAAACCATGTGATCACTGAAGCTCAGAGGCGTGAGCTTCACCATCAAGTTTTCATCTTCAACCATTTGGCTTATAACCTTCCTCCTCCTTATCACCTTGTGCAATTCCCTAGCAACATGTCAGAATACAGTTTCCTGGGTTTTGATCATGGGGTTATGGTGGATCCAGAACCTCATAGGTGTAGAAGAACTGATGGAAAGAAATGGAGGTGTGGTAAGAATGTGGTGCCTAACCAGAAGTACTGTGAAAGGCACATGCATAGAGGTCGAAATCGTTCAAGAAAGCCTGTGGAAACATCTCAAGTTAACTCTCCTTTGGCAACAAAGCCTTGTAGCAAGTCACACACCAAACCATCCTCAAAGACACAATTTGAAATTTCAAGTCCAAACCTTATCGCCATTCCAC | |||||||||
gi|213590302|gb|DB970114.1|DB970114 DB970114 full-length enriched soybean cDNA library, mixture of seedling, young plant, adult TGCCAAAGGAGAGCTGCCCTG EST sequence (targeted fragment marked with yellow): GACACTAACACAACAAGTTCCCATCTTCACCAAAGCCTTAGCATTCTACAGAGAGAAATAGTGTCACTCTGCAATGGTTCCAAAGCTTGGTGGTGACGTGGAGGATGGTGGAACTGGGCGTGGAACTAAGCCTATCTGAAAATTCCCACCTCTTCCTTCTTCTAATAAGGTTGAAGTTCTTAGCTAAAAAAAAAGAAGAGAGCATAAGATAGCTTTTTGAAGCTGAAATCAAATTTTGTGAAGTAGCAAATACTTTCAGTTTGTTTAGTTCTTCTGGGTGTAGTTCCTTCATTTTCTGTTTATAGTCATGGAGGTTTATTGGTTCTATACCTTTTATAGCTTTTTATGGATCCAACCACCTCAAATGTGCAAATGGTTCAAAAGAAATGATATGGTAACAGAAGCTCATCTCCCTTGTTACCTGATAGTGATAGAGTGCTAGACTTAATCGTAGAGGCAGATGTCCTTTGGCAGTGTAACCCTCAATCTTTGAACAGGAAACTTCATCTATTTCAGATATCTCTTTATGATTGAAGATTCAGCTGTACTGGGCAAATCTTCTTTGGCAAAAGTTACTTAATTTCTTTTGGTTGG | |||||||||
gi|151393378|gb|EV263253.1|EV263253 GLLA441TF JCVI-SOY1 Glycine max cDNA 5', mRNA sequence TGCCAAAGGAGAGCTGCCCTG EST sequence (targeted fragment marked with yellow): ATCCCAAATGTGCCAATGGTTCAAAAGAAATGATATGATAACAGAAGCTCATCTCCTTTGTTACCAGATTGACCTGATTGAGTGTTAGACTTATTTGTAGAGGCAGATCTCCTTTGGAAGTGTAACCCTCAATATTGGAAAATGAAGCTTCATCTATTTCAGATATCTATTTATGATTGAAGATTCGGCTGTACTGGGCAAATCTTCTTTGGCAAAAGTTACTTAATTTTCCTTTGGTTGGATACTTGGATTCCAAGTAGT | |||||||||
gi|254320452|gb|GR826901.1|GR826901 CCCC2515.b1 CCCC Glycine max callus grown in dark condition Glycine max cDNA clone CCCC2515 TGCCAAAGGAGAGCTGCCCTG EST sequence (targeted fragment marked with yellow): CCCAATAACAAAAGTGGAAAATTGAAGAAAGGATTCCAACAATTGGAAATTTGGAATCACCCATAAACAGAAGAAAAAAACTCTTCTTTTTCCTTCTCTGCGATTTCTCAGCTTTCACTCTTCGCTTTCCTTTTTCAGGTGCAAAGCTTCAATAACGTAACTGCCATTTTTATTTTTAATTTAATTATTATTGTTGCTTTACGTGCAAGCTTCTCCTATTTCTCCCGTCCAGGGAAAGAAGAATCCTACGTTAACATTTTTGGGGGAAATTCAACCCATGATTCTGTGAGGTTTGTTTCAGCGTAAACGTTGCTTGTTTGGGTATTTGAGGTAACAGAGGAGAAAAAGCTGAAAACTTTTTCTGCCTTGTGATTTTGTTGATTTCATGGGTTTAGGGTTGCTCTCCTTAGGCAAATGGGGTTTTGAAATGATTGGCTATTATTAATTTTGCTGTAAGTGGGAATTTTTTGTTTTTGGGTTTTGTCTAGGTCAGATTTGGAAAGAAAAAAAGTTTCTTTTTTTTGTGGGATGTTCTGTGGAATGTCGTGGTGCGGATTAAGGGTTGACTTCTTTTGAAAGTTTGGAAATTGATTGGTGTTTGAGTTTTGAATTGGGGAGGTTGAGATTTTGGAGTAGTGATTGAGTTTGGTTC | |||||||||
gi|192323389|gb|FK017435.1|FK017435 GLNCN40TF JCVI-SOY3 Glycine max cDNA 5', mRNA sequence TGCCAAAGGAGAGCTGCCCTG EST sequence (targeted fragment marked with yellow): GGACACTAACACTACAAGTTCCCATCTTCACCACGAAGCATTCTTAGCATTCTACAGAGAGAAAAGTGACACTCTACAATGGTTCCAAAGCTTAGTGGTGACGTGGATGATGGTGGAACTGGGCTTGAAACTAAGCCTATCTGAACAATACCCTCCTCTTCCTTCTTCTATTAAGGTTGAAGTTCTTAGATAAGAAGAAGAAGAGAGCATAAGATAGCCTTTTGAAGCTGAAAGCAAATTTTGTGAAGTAGCATATATACTTTCAATTTGTTTAGTTCTTCTGGGTGGAGTTCCTTCATTTGGTGTTTGTAGTCATGGAGGTTTCTTGGTTCTATACCTTTTGCAGCTTTTTATGGATCCAACCATCCCAAATGTGCCAATGGTTCAAAAGAAATGATATGATAACAGAAGCTCATCTCCTTTGTTACCAGATTGACCTGATTGAGTGTTAGACTTATTTGTAGAGGCAGATCTCCTTTGGAAGTGTAACCCTCAATATTGGAAAATGAAGCTTCATCTATTTCAGATATCTATTTATGATTGAAGATTCAGCTGTACTGGGCAAATCTTCTTTGGCAAAAGTTACTTAATTTTCCTTTGGTTGGATACTTGGATTCCAAGTAGTAAAAATATATCAACATTATTTTTTGCCTTCTTAAAATATTACCATTCAGAGATAATTTCTCTAGGAACTCCACCCTTTCTTGGGGGGCAAATCTCCTTTGGCATCTTTTGCTTATCTTGGTCTGTTTCCTCCATAGCCAGAATTTTTTCTTTCTGTAAACCACC | |||||||||
gi|208051310|gb|GD847149.1|GD847149 454GmaGlobSeed589798 Soybean Seeds Containing Globular-Stage Embryos Glycine max cDNA, mRNA TGCCAAAGGAGAGCTGCCCTG EST sequence (targeted fragment marked with yellow): CAAATGAAGGAACTCCACCCTTTCTTGGGGGCAAATCTCCTTTGGCATCTTTTGCTTATCTTGGTCTGTTTCCTCCAATAGCTAGAATTTTTTTTCTTTCTGTAAACCACC | |||||||||
gi|192316829|gb|FK006070.1|FK006070 GLMDP95TR JCVI-SOY2 Glycine max cDNA 5', mRNA sequence TGCCAAAGGAGAGCT-GCCCTG EST sequence (targeted fragment marked with yellow): GAAACAAAGTTACGTTTTCCCTTTTCACTTTTGTTGCCGGTTAGCACTTCAATGTAAAAATTAATTCACCATAAAGGATGGTTCGCATACAAAAGAATAAAACCTTATGAAAGGACACATGCAACGCAAAATAAAGGCATCGTTCCATAGGATATGCCGATCCTAGTGAGCCATAAATAACGTTCCCAAAGGCATTCCTCTATGTGTGTGGATCTTCCCAGTTGCAGCTGCATTACAGGGCAAGTTCTCCATTGGCAGGTAGCCACTATGATATGCATCTCATAAATATTTGCAACTTTCTTAATGTGCAATCTGCCAAAGGAGATTTGCCCAGCGATTCTCCTGCAACATCTGCTTCATGAAAACAGTATTCGTTAGTTTCTTCAATCATTCATTAGAAACATTTCTTGTACTGGTTGAAATGTTGCATCTCGAACCATTCATATGCCATATTTCCCTTGTTTTGTATTTTGGTAAAAACCATTTTTCCCAGCTTCTTTTTCGGTGAAGTCGATATTTATAATTTTATAATTTATTTTACATTTTGGTTAGTATAGACCA | |||||||||