| mature miRNA: TTCCACAGCTTTCTTGAACTG species: Glycine max database: miRNEST The numbers on the right side of the alignments show a score calculated for them. When calculating the score, a mismatch is given a score of 1, bulge: 2, and wobble: 0.5. |
| Predicted miRNA targets | |||||||||
gi|298185830|gb|HO030991.1|HO030991 ocpsga0_0289_B11.ab1 Soybean immature seed full-length-enriched cDNA library Glycine max cDN TTCCACAGCTTTCTTGAACTG EST sequence (targeted fragment marked with yellow): GGGGGCAGTTGCAGAGTTTAACGTTTGGCCATCACAGAAGGGGGAATGGAGTTTTCTCAAGATGATTTTGATCGGTTACTGTTATTCGAGCACACGCGAAAGAGCGCTGAAGCAAACTACGCAGAGAATCCTCTAGACGCTGATGTACGTATCGTTCTTCATCTTCATTCTATGAGTTACTTTGCTCATACCAATCTGACCAAGTGGGGGGGAGCTTTGATCGAGTTGTCGTCGTTCCAAGCTCCTAAGGATGCCAAGGCGATGATTGATGATGCCCTTTCAAAGCTGGAGGAGGCTTTGCTGATCAATCCAACTAAGCATGACACTCTTTGGTGCTTGGGAAATGCAAACACGTCTTATGCTTTTCTAATCCCTGATATCACTGAGGCAAAGGGTTATTTTGACAAGGCACTTGATTATTTCCAGAAAGCTGTGGATGAGGATCCTGAGAATGACCTCTATAGAAAGTCCTTGCAAGTTGCCATTAAGGCCCCAGAACTACACATGGAGATCCATAAAAATGGGCTTGGTCTGATGAGTAATGCGG | |||||||||
gi|58021764|gb|CX708505.1|CX708505 gmrtDrNS01_37-C_M13R_A07_063.s1 Water stressed 5h segment 1 gmrtDrNS01 Glycine max cDNA 3', m TTCCACAGCTTTCTTGAACTG EST sequence (targeted fragment marked with yellow): AGGAGGTGCGCAAATGGTAACAGTGAACTATGAATCAAAAGAGGGAGAGATCACATTCAGAGCAATGAGCTTCAACAAGTGCAGAAATTTGTATAAGCNTAATCTGCAAGTTGGATGAAGTTATTGTTACCGAAAAAACCACAAGCTCAAAGAGGAGGAAGGTGGAACAAGGCTTTAGACATTGCTGCTGTTAGTCGTTGTTCCACGTCAAATTTTGACTCTGATAAATCAGAAACAGCTCTTTCAAAATGGGCAAGACCTAGGACCATGGCTGCTAAGGTACCCCTTTTGTGTGGTGGAAAAAGGTTTGTCCAAAGATGATAAGGCGCAGAAATTACCTCTAAGGCACTGGCTTGAAGCTGGATCAAGAAAGCAGTGGAAGAACTCAATCCAGTGAGGAGAACAGTTTTTGGCATGCTCTACAACTAGGTGTGGCATATGTTATCATACACAATTAGCAAGCGTGAAATGAGGCCATTTTCTTTTTTGCAAAGCTTCTGTTTTGCTGAAGAAGTTTATGCCCTTTGCAGAGCTGCACCTGGTGGTAAAACAACTTACGTACATTGCTGCTCTAATGAGTTTGAATGAGAAAGAGAAGATTCTTGAAGTACTAAGGAATTGGCCTGAGAAGAACATTCAAGTCATTGTTGTAACTGACGGAGAGTGAATTCTGGATCTTGGGGATCTAGGCTGTCAGGGGATGGGAATACCAGTAGGAAAACTTTCTTTATATTCAACACTTGGTGGAGTTCGTCCTTCTGCTGTACGTATTTTCAGTCAATTATGTCTATGACAAACTTCTTGTTATATATTAATTTGTTTCACCCAACAAAACTCAATTTTTTTGACTTGGACAATAAGTTGTTGGTGTCTTTGATCGGTTT | |||||||||
gi|193320612|gb|FK286511.1|FK286511 454GmaGlobSeed21143 Soybean Seeds Containing Globular-Stage Embryos Glycine max cDNA, mRNA s TTCCACAGCTTTCTTGAACTG EST sequence (targeted fragment marked with yellow): CGGCTGGGGAAGAACTCGACAATGGGCAAAACTTACGGCTTTTGGATGATCTTCATGTTCACATTCTTGCTTCTCGTGAATCTAGTTCAGGAAGGGATACCATTCGCATGGAATACCTTACTCTTCTTCTTAAACAAATGACAGAGACCCTGCGAACCCTGCCCAAGGCTGAAGCAGTTCAGCAAGTTGTGGAATTTATGAATACATACTCTATCAGT | |||||||||
gi|298167702|gb|HO012965.1|HO012965 ocpsga0_0057_A02.ab1 Soybean immature seed full-length-enriched cDNA library Glycine max cDN TTCCACAGCTTTCTTGAACTG EST sequence (targeted fragment marked with yellow): GGGGGCAGTTGCAGAGTTTAACGTTTGGCCATCACAGAAGGGGGAATGGAGTTTTCTCAAGATGATTTTGATCGGTTACTGTTATTCGAGCACACGCGAAAGAGCGCTGAAGCAAACTACGCAGAGAATCCTCTAGACGCTGATAATCTGACCAAGTGGGGGGGAGCTTTGATCGAGTTGTCATCGTTCCAAGCTCCTAAGGATGCCAAGGCGATGATTGATGGTATATCACGTGTTAAATTGAGCAAAATTTAAAAGTGAATTTCTGTTTTCGAGAAGGTAAGGGCGAGTTACTGTGATTGATTTTGGGATTTGGTGGGAACCAACCAACTAAACAGATGCCCTTTCAAAGCTGGAGGAGGCTTTGCTGATCAATCCAACTAAGCATGACACTCTTTGGTGCTTGGGAAATGCAAACACGTCTTATGCTTTTCTAATCCCTGATATCACTGAGGCAAAGGGTTATTTTGACAAGGCACTTGATTATTTCCAGAAAGCTGTGGATGAGGATCCTGAGAATGACCTCTATA | |||||||||
gi|298197259|gb|HO042002.1|HO042002 ocpsga0_0441_A02.ab1 Soybean immature seed full-length-enriched cDNA library Glycine max cDN TTCCACAGCTTTCTTGAACTG EST sequence (targeted fragment marked with yellow): GGGGGTTGAACAAGTTTGCTGACATGACCAATGAGGAATACCGTGCCATGTATTTGGGCACCAAGAGTAATGCCAAGCGCAGACTCATGAAAACCAAGAGCACCGGTCACCGCTACGCGTTCAGCGCCCGTGACCGGTTGCCGGTGCATGTGGACTGGAGGATGAAAGGTGCAGTTGCTCCCATCAAAGATCAGGGAAGTTGTGGAAGTTGTTGGGCGTTCTCAACGGTGGCCACAGTGGAAGCGATAAACAAGATAGTGACAGGGAAGTTTGTGTCCTTATCTGAACAAGAACTTGTGGACTGTGACAGAGCCTACAATGAAGGATGCAATGGTGGCCTTATGGACTATGCATTCGAATTCATCATTCAAAATGGTGGCATTGATACTGACAAAGATTACCCATACCGGGGCTTTGATGGCATCTGTGATCCAACTAAGAAAAATGCTAAGGTAGTGAATATTGATAGGTACGAGGATGTTCCACCATATGATGAGAATGCCTTAAAGAAAGCTGTGGCTCATCAACCTGTAAGCGTTGCTATTGAAGCCTCTGG | |||||||||
gi|193409168|gb|FK372486.1|FK372486 454GmaGlobSeed107118 Soybean Seeds Containing Globular-Stage Embryos Glycine max cDNA, mRNA TTCCACAGCTT-TCTTGAACTG EST sequence (targeted fragment marked with yellow): AACAGAGAGAAGGCTGATCCTGAGTTGTGTTGTTATGGCTCTAACATTGGATTTGTTGAAGATATGCTGCTGGCAGATGGAAAGATTAAAATCTAAAAAGCAAAAGAAGAGAAAAAGCAGTTCAAGATAAGCTGTGGGAGAATGGTGATGGATACTGAAACCAGTAAATTCATACTCAAGAAGCGTGAGTCTCAAGGTGACAACAGGGAGAAGATCGATCCTGAGTCATGTTGTTA | |||||||||
gi|58020384|gb|CX707126.1|CX707126 gmrtDrNS01_20-C_M13R_H04_018.s1 Water stressed 5h segment 1 gmrtDrNS01 Glycine max cDNA 3', m TTCCACAGCTTTCTTGAACTG EST sequence (targeted fragment marked with yellow): GGGCATTGTTTCTCTTTTCAGGACAGCTAAGGAGAATTTCGAGCTTGCTTTGGAAGCTGATAATACCAATACCCATGCTAGGTATTGGTTGTCCAGATTGCATATGAAATACCCTGTTCCAGGAGCTAATAAAGCTGTAGGGGCAGCATTATTGGTAGAAGCAGCAGAAATGGGTGATCCTGAGGCACAGTATGCATTGGGTTGTCATCTAAGAGTTGAGAATGACTATGTCCAGTCTGATCAACAAGCTTTTTATTATTTCGAGAAAGCTGTGGACCAGTTGCATCCAGGTGCTCTTTACCTTTTGGGTGCTGTATATTTGACAGGCGACTGTGTCAGGAAAGATATTGCTTCTGCATTGTGGTGTTTCCACAGAGCATCAGAAAAGGGCCATGCTGGGGCTGCTATAGCATATGGATCTCTTCTTCTTAAAGGTGTTGAGGTTCCAGAATCGGTAATAAAGTTCAGTTTGACGAGAGGTGCTTCAGCTCATAGACGGGGGAGGAATAAGGGAGCTCTTGCAATTGATCCAGTAGAGATGGCAAGAGAAAAGTTTCAGATAGCGGCAAAAGCAGGGTGTGAGCTTGGATTCAAATGGCTTGCAAGGTTAGAGGAGGAAGAGAAACGGGCACTCACGGGGGACCATTGAGATGAAATTGAGAAGTGTAGTGTGCTTTTTTTTCTTTCTTTTTTTTTTCGTAGCAGAATCCGATCTGAATCATATGATTTAGCTTGTCTGAATTGTGGATTTTAATCATCGGTGAAAACCAATAAATAAAGGTGAGGATTTTTGTC | |||||||||
gi|151395182|gb|EV265053.1|EV265053 GLLAP84TF JCVI-SOY1 Glycine max cDNA 5', mRNA sequence TTCCACAGCTTTCTTGAACTG EST sequence (targeted fragment marked with yellow): GGACCACCACCAACAACAACCTTTCAAACCCTCCAACCTTAGTTTCAATTCTAAACTTGTTCACCCTTTATTCTCTCCTCTTCCAAACATCAACCATGGCTTCAATAATAACCTTGGTGACATCCACCTTGCTCTTTCTTTCTTTCACTTTGTCATGTGCTATTGACACCTCCACCATCACCAACTACACCGACAATGAGGTCATGACCATGTACGAGGAGTGGTTGGTGAAGCACCAAAAGGTGTACAATGGGTTGAGAGAGAAGGACAAGAGGTTCCAAGTTTTCAAAGACAACTTGGGGTTCATACAAGAGCACAACAACAACCAGAACAACACTTACAAACTTGGGTTGAACCAGTTTGCTGACATGACAAATGAGGAATACCGTGTCATGTATTTTGGCACCAAGAGTGATGCCAAACGCAGGCTCATGAAAACCAAGAGCACCGGTCACCGCTACGCGTACAGTGCCGGTGACCGGTTGCCGGTGCACGTGGATTGGAGAGTGAAGGGTGCAGTTGCTCCAATCAAAGATCAGGGAAGTTGTGGAAGTTGTTGGGCGTTCTCAACGGTGGCCACAGTGGAAGCAACAAACAAGATAGTGACAGGGAAGTTTGTGTCCTTATCTGAACAAGAACTTGTGGACTGTGACAGAGCCTACAATGAAAGATGCAATGGTGGCCTTATGGACTATGCATTCGAATTCATCATTCAAAATGGAGGCATTGACACAGACAAAGATTACCCATACCGTGGCTTTGATGGCATCTGTGATCCAACT | |||||||||
gi|213595969|gb|DB956005.1|DB956005 DB956005 full-length enriched soybean cDNA library, mixture of seedling, young plant, adult TTCCACAGCTTTCTTGAACTG EST sequence (targeted fragment marked with yellow): GGTTGTTGTTGTTGTTGTTGTCCGTGTTCTTCTTCTGGTTGGTCTCACAACTGAACCACCCAAAACTCACTCTCGGATGCATTAGACAACAATGGAGGATTCCGAGAAATTGACGGCGTTGAAGAAGGCCTACGCCGATATCATCCTGAACACGGCGAAGGAGGCGGCGGCGCGAATCATGGTGTCGGAGCGGAAAGTCACGCGCTTTCAGCAGGAACTTGTTTCCACTAAGGAAGAGGCGCTTCGGATGCTTCTCAGACTCAAACAAATGTTCGATTCTAAGGTCAGTGAAGCGGAGCTGATGTCATTGAATCAGCAGAAGAAGATTGAGGAGCTTGAAGCTCAGCTCCAGGAAGCTGAGGAAATAGTTAGAGATCTAAGGGCAGAGTTGAGAGAAACCCAGGCTGAGCTGGAGAATGTGACAAAACACCAAATGCAACCCCTAGTTGAACAAAACACAGAGGCTGAAGTTGCAGCTCAGGAAAGTTTTCTGCAAAAGAACAGACTTGATCCTTATGATGGATCTATATATTCTGC | |||||||||
gi|208106452|gb|GD905569.1|GD905569 454GmaGlobSeed648218 Soybean Seeds Containing Globular-Stage Embryos Glycine max cDNA, mRNA TTCCACAGCTTTCTTGAACTG EST sequence (targeted fragment marked with yellow): TGAAGCTCAGCTCCAGGAAGCTGAGGAAATAGTTAGAGATCTAAGGGCAGAGTTGAGAGAAACCCAGGCTGAACTGGAGAATGTGACAAAACACCAAATGCAACCCTTAGTTGAACAAAACACAGAGGCTGAAGTTGCAGCTCAGGAAAGTTTTCTGCAAAAGAACAGACTTGATCCTTATGATGGATCTATATATTCTGCACCTGGTTTACAGTTTGAATCTGTCTCTATTTCTGAAAATAGGAATCCG | |||||||||
gi|254347150|gb|GR856820.1|GR856820 CCCC21128.b1 CCCC Glycine max callus grown in dark condition Glycine max cDNA clone CCCC2112 TTCCACAGCTTTCTTGAACTG EST sequence (targeted fragment marked with yellow): CTCTTTCCTTCATTGGTGGCTTTCAACCCAAAGCTGAAATCATCTAAACATGGCAAACCAAACCGAACCAAAAACCAACATTCCTAATATCAACGCCTTCCCCCAATAAGGAAAGTAAAAATCAACAAGTACATCCTTACTCAGCTCTCTCTTTCAACAACATCCCACCACACACTAACACCAACTCCAACTCCAACTCCAAGTCTTCCCCTAACTAACACCACTAACAACAATCACTAAAAAAAGAAAGAAAATTTACCCTGATCGCAGGATCTCCGAACAAAGCTTTGATTTCACAAAAGCTAAATTTAGATAAACACCTGCATATTAAATTTTTCTGCTCTATACATGCATCACATGTCCCTCACACTAAACAAAAGAAAAACACCACCACCCTTTGCTTTTGCTTTTCTATAAGTAGTCAACGGCTCAGCCTTAATTTCTTTGCTTTTTTTAGGTTAAGGTACATGGTGAGGGAGAAGATTCAGATTAAGAAGATCGACAACGCCACGGCGAGGCAGGTCACGTTCTCCAAGCGTCGCAGAGGGCTCTTCAAGAAAGCTGAGGAGCTTTCGGTTATGTGTGATGCTGATGTTGCCCTCATAATCTTCTCTTCCACTGGGAAGCTCTTTGAGTACTCAAGCTCAAGCATGAAGGAAATACTTGAAAGGCATCATTTGCACTCAAAGAACCTAGCAAGGATGGAACAACCATCTCTCGAGTTGCAGCTAGTTGAAAACAGCAATTGCTCTAGATTGAGCAAGGAAGTGGCTGAAAAGAGCCATCAACT | |||||||||
gi|298174395|gb|HO017731.1|HO017731 ocpsga0_0118_G09.ab1 Soybean immature seed full-length-enriched cDNA library Glycine max cDN TTCCACAGCTTTCTTGAACTG EST sequence (targeted fragment marked with yellow): GGGGGGTTGAACCAGTTTGCTGACATGACAAATGAGGAATACCGTGTCATGTATTTTGGCACCAAGAGTGATGCCAAACGCAGGCTCATGAAAACCAAGAGCACCGGTCACCGCTACGCGTACAGTGCCGGTGACCGGTTGCCGGTGCACGTGGATTGGAGGGTGAAGGGTGCAGTTGCTCCAATCAAAGATCAGGGAAGTTGTGGAAGTTGTTGGGCGTTCTCAACGGTGGCCACAGTGGAAGCAATAAACAAGATAGTGACAGGGAAGTTTGTGTCCTTATCTGAACAAGAACTTGTGGACTGTGACAGAGCCTACAATGAAGGATGCAATGGTGGCCTTATGGACTATGCATTCGAATTCATCATTCAAAATGGAGGCATTGACACAGACAAAGATTACCCATACCGTGGCTTTGATGGCATCTGTGATCCAACTAAGAAAAATGCAAAGGTTGTGAACATTGATGGGTTCGAGGATGTTCCACCGTATGATGAGAATGC | |||||||||
gi|192324021|gb|FK019312.1|FK019312 GLND919TF JCVI-SOY3 Glycine max cDNA 5', mRNA sequence TTCCACAGCTTTCTTGAACTG EST sequence (targeted fragment marked with yellow): GGACACCTTTTCTCTCTCTTAGCTTAGCCTTCTCCTATTCTGGACCTCTGTCCCTTCCTCTTGATTAGGGTTCTAATTATGTTATGAACCTTCCATGCTTTTATTTTTCTTTTAAAAAAAGAATAAAGAAAACCCTACATATGGGTTTGTGGGGTATATTCAGTCTTCAATATCATGGCTCTCTTTGTATTCTTCCACAGCTTTCTTGAACTGCATCCAAAGAGTTCCTTTGCATGCATGCCATGGCACTCTTACTCCCAAATCTTGTTTTGCGGTTCAATAAAGCTGTGGGAAGATACAGATAGGGTCAACAACGGACTAGTTTATCTCAAACTCCAGATTCTTCTCTAAATCTTCCTATCCAATTATATATAGGGATAAAATTATTGCAAAGTATTTTTTTTCCTTTTTCTTTTGTGATTTGACTTAATTTAAATCATTTTCAGATTTAAACCATCGACTTTTCAGGTATATCTCTATATGTGATCAGAATTCTCAGATGCAGTATTATGAGAGAATAAACTTGTACCAATTGGGTAGATTTGTGACGATGATGAGGAAGAGGATATGATGATTCCCCAACAATTTGGCTTCTTTCTGGAATTAAACCGATCAGGTATTGATTTGATCTATGCAAAATCAAGGGAATTTGGGCTCACGATTTTGGTAGATGCGGAATTACTATGCAAACTTTATTTTCAGATCTTATAATTATAATAATTAATTTGTTCGAAAACCGTTATATGTGTTTGCCTTAAATTTTATACCCCTATTTAATTTTCTCTTAATTAATTTTGTCCAGCAATT | |||||||||
gi|151398047|gb|EV267925.1|EV267925 GLMA064TF JCVI-SOY2 Glycine max cDNA 5', mRNA sequence TTCCACAGCTTTCTTGAACTG EST sequence (targeted fragment marked with yellow): GGATCACAAATTGTAGTTGTCATATGCGTGCAGCATGGTGGGCTTTTGGAGAACGAAATTTCAACCGGTTTGGTGGGTGTCTGGGAAAGAACTCAACAATGGGCAAAAACTTAAGGCTTTTGGATGATCTTCATGTTCACATTCTTGCTTCTCGTGAATCTAGTTCGGGAAGGGATACCATTCGCATGGAATACCTTACTCTTCTTAAAGAAATGACAGAGCCCCTGCCAACCCTGCCTAAGGCTGAAGCAGTTCAGCAAGTTGTGGAATTGATGAATACATACTCTATCAGTCAAGAAGATTTTGATACTATAGTAAAGTTATCAAAATTCAGGGTTCCTTGACTATATTGTTTTTATGTTGTGTTTACTAC | |||||||||