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mature miRNA: TGAAGCTGCCAGCATGATCTG
species: Glycine soja
database: miRNEST
The numbers on the right side of the alignments show a score calculated for them.
When calculating the score, a mismatch is given a score of 1, bulge: 2, and wobble: 0.5.

Predicted miRNA targets
gi|12490831|gb|BG044275.1|BG044275 saa26b11.y1 Gm-c1059 Glycine soja cDNA clone GENOME SYSTEMS CLONE ID: Gm-c1059-70 5' similar

TGAAGCTGCCAGCATGATCTG
||||||||||||||| |||
ACTTCGACGGTCGTAAGAGAA

EST sequence (targeted fragment marked with yellow):
GTCATCATCGCATCTTATCTTCGCTGCCACTGCAACAGGGAAGATGCATGAGTTCTCCATTGTTGATGGTTTTGTGGAGATAAGTGAATGCATGGCAGAGATGACCAAGTACGTGGCTAATGAACCATCCGTTGGGCTTTTCTTTATCCAACAGCATGCTCAAAATGCAGTACCCAATATCATCAAAGTTAAGAAAAATGTTGTTGAGAAGTCTCATGAAACAACTTTGCACACAGAAGATTTGGAGGACTCTGTCACAATGGTTCAATCAATGAAAGAGTGTGGATTTCCCATAGCTGATAAGATGATCAGAGAGATTAAAAAATCTCTGATAACTATGGAAACAAAACATCCGAAAAGAGGGTTAATCCATCCTGCATCAAGTTCTCATTCAGAAAGAGCTAGTCTCTTGGGTAACGCTGCATTTTATGCTCAGGAGGGCAATGAAAAAAGGAGTAACTATTTCTCACATGTTTTGAAGTCAGCAAAAGAGAATGCTGGCAGCTTCAAGTGGCGGCAGCTTGAT