miRNEST 2.0: an integrative microRNA resource miRNEST 2.0, an integrative microRNA resource :: Browse




mature miRNA: TGAGACCAAATGAGCAGCTGA
species: Glycine soja
database: miRNEST
The numbers on the right side of the alignments show a score calculated for them.
When calculating the score, a mismatch is given a score of 1, bulge: 2, and wobble: 0.5.

Predicted miRNA targets
gi|12493579|gb|BG045642.1|BG045642 saa04b11.y1 Gm-c1058 Glycine soja cDNA clone GENOME SYSTEMS CLONE ID: Gm-c1058-94 5' similar

TGAGACCAAATGAGCAGCTGA
| |||||||||||||||||
TCACTGGTTTACTCGTCGACC

EST sequence (targeted fragment marked with yellow):
GGTGCTACAACAAGTCTCACAAGTAACAACACTGGTTCTGCATTTGGTGCTTCATTGTCGCCTCCAGATCCAACTAACTGCGTTCAACCGGACCCAGAAAAAGACCCTTTTTGCCCACCACCCCCCTTCAAAGACTACGAGCTCCCTCCACACGATGACAAGACATTACCCCTTCGAATTAGACCAGCTGCTCATTTGGTCACTGATGATTACATAGCCAAGTACGAGGAAGCCGTGAGGCGCATGCAAGACCTTCCACCTGATGATCCTCGCAGTTTCATGCAACAGGCCAATGTCCACCGTGCCTACTGCGATGGTCGCGGCTATACTCAAAAGGGCTTCGCTGACTACAAGCTTGACGTTCACGGCTCCTGGATATTCTTTACTTGGCACCGCTGGTATCTCTATTTCTATGAGAAAATCTTGGGGAAGATGATCGGTGACCCCACTTTCGCTCTTCCGTTTTGGAACTGGGACAATCCCGCCGGCATGAGAATCCCTCCCATTTTCACAGACAAAAGTTCGCCTCTCTACGACGAACACAGGAATAGCGATCATGTAAATGCTTTCATCGACCTAGACTACAAG