mature miRNA: ACATCATCATCATCATCATCA species: Glycyrrhiza uralensis database: miRNEST The numbers on the right side of the alignments show a score calculated for them. When calculating the score, a mismatch is given a score of 1, bulge: 2, and wobble: 0.5. |
Predicted miRNA targets | |||||||||
gi|227769655|gb|FS278611.1|FS278611 FS278611 TPC Glycyrrhiza uralensis cDNA clone kanzou035DE11.f1 5', mRNA sequence ACATCATCATCATCATCATCA EST sequence (targeted fragment marked with yellow): TAGACTTGGTCACAACCACCAAGGTTATGGTTATCTGAGTCGTCAGAAACCTCCTGTGAGGAATTCCCCATATTCTCATCCAGTTGCAAATGAATCTGCACAAGACAATGATGATGGTGATGAAGAAGGATTGGGAGGGGAAGATGATGGTGATGATGATGTTGATCAAAATGATAGTGTTCAACTTTCCCAGAAGCATTCTGATGACAATGATGATGAAGAAGATGACACTGATGATGGGGATGGTGATGAAAATGTTAATGATGATGACAACAACAATGATGATAATGATGATGGTGGTGATGGTGATGACAATAAGCAGAACAGTTATGCCGTTAAGACTGAAGATGACTTAGAGTGGCACCCAAAAAAGCAAAAGCTGAAGAGTTTGGTTTCAGCCTATGAATTTGCACCTCGGGTACCAGCAGCTTCACCACCAGCTGCAGCTCCCAAACCATCTTTTTGGGGTAGGAATTCCCTTACTGACTGGACTGAGCACGAGACATTTGTTCTTCTTGATGCGTGGGGTGATCGGTTTCTTCAACGCAGAAGGAAGAGTCTTCGATCTGAGGAATGGCAAGAAGTTGCAGAGAAGGTATCACAAGTTTCCAAAATTGAAAGGTCAGATACTCAGTGTAGAAATCGTCTAGATACACTGAAGAAAAAAATACAAAAAGGAGAAGATTAAATTTACAGAAATGGGTAGTAGTGGTGGAGCTAGCAAATGGGTTTACTT | |||||||||
gi|227765492|gb|FS274782.1|FS274782 FS274782 TPC Glycyrrhiza uralensis cDNA clone kanzou023CF08.f1 5', mRNA sequence ACATCATCATCATCATCATCA EST sequence (targeted fragment marked with yellow): ACAGCGTCAACTGAAACAATCCATAAACCCAAAAATTTCTCATCTTTTTCTTCACCGTTTCTCACACCAGAGCCATAAATAATCATATACACACAAAATAGAGAGAAGACACAGAAAGGCCGAAGAAGAAGAAGATGAAGGAAAGCAGTGATGGGTTTGTGAGGGCAGATCAGATTGATCTGAAGAGCATAGATGAGCAACTTGAGAGGCACCTCAACAAGGCGTTGACTATGGACAGGAAAAAGCGCGTTGAGGAGGAAGAAGAAGATGGTGATGATGATGATGATCATCATCATCATGTTCGTGTTCACGCCACCAGCAGCGCCACTACTTCTCCCAAAGCAATTAAGTTCAAACCTTCCTTGAAGAAGCAAAAGCAGGAGTGGGAGATTGATCCTTCCAAACTCATCATCAAGAGTGTTATAGCTCGTGGCACTTTTGGCACTGTCCATCGTGGTATCTATGATGCCCAAGATGTTGCTGTTAAATTGCTGGACTGGGGTGAAGAAGGCCAAAGGACAGAAGCGGAGGTTGCTTCACTGAGGGCAGCGTTTATACAGGAAGTTGCTGTTTGGCACAAACTTGATCATCCCAATGTCACAAAGTTTATCGGAGCAACAATGGGGTCTTCAGAATTGCAGATACAAACTGATAATGGTCTAATTAGCATGCCAAGCAATGTCTGTTGTGTTGTTGTGGAGTATCTCGCTGGAGGTACGCTGAAATCGTACCTAATAAAGAACA | |||||||||
gi|227759489|gb|FS280458.1|FS280458 FS280458 TPC Glycyrrhiza uralensis cDNA clone kanzou042AC10.f1 5', mRNA sequence ACATCATCATCATCATCATCA EST sequence (targeted fragment marked with yellow): GGATATAGGGAAGAGTCTGAACGCTGCGTTGCAGAGGTTGCTTTATCCGTCGAGGACTCTCTCAAATATGCCTCTAAGCGCAAGTCTCCGCAATCACAAGCTTCCCCTCCCCGTGATGCCAAGAAGTTGAAGATATGGATGGGGAAGAGGACATTGGATGAAAGTGATAGTGATGATTCTGATGATGATGATGATGAGGGGGAAACTGAGAAATCCGTTTTGTTAAATAGCCTGAATGAGTCTGGCTCAAATAAGGCTGAAGATAGTTTGGGTTCGGTAACTGGTCGGAAGCAGGATGGAGACTCTTCTGGGGTTGGTTCATGCGAGAGTGGATCTGAAGAAGAGAAGGAAACTGTTGTAGAAGGCAAAATGGAATCTGTTGGATCCCAGAGTTGTGAAACTACTCAGGCTAAACATAGTGTTGCTGCTGAACCTGTGATGAATGATGAGATGGTGGAGGCTAATTCTGTGCCTTGTTCGGAGTTGTTGGTTCCTGGAACTAATGGTAAAGATAATGGATATCAGGATTGTGATGGAGCCGTGGCTGACAAGCTTGATGGCACTGTTGTGAGCTCTGAAACTGTGGCCGGTGCTGGCAAATTTAATGACATGGAAATTGATGGATCTCTTGAGCATAAAGTGGCAGTCGTTGAAGAAAGCTTGCCGAGCACTAGTGTTCTGGCATC | |||||||||
gi|227770567|gb|FS268285.1|FS268285 FS268285 TPC Glycyrrhiza uralensis cDNA clone kanzou002AF12.f1 5', mRNA sequence ACATCATCATCATCATCATCA EST sequence (targeted fragment marked with yellow): GCTACTGGGGCTCTCTGTGAGTTTGTGACCAAATTGCATTCTGCTATCTCTATCGCTTCCCTCCTACACACCCCACCATCCTCCATTGGTTAGGGTTTGCACTTTCTCTCTCGGAGCTTCGAATTGATCCATAATTGAACCCGGTTTCGCAACCCTTCCATAGTTCCTCGTTCAGACAACTCGCGAAATCAGAAAGACATCGACGGCTCCGCGTGTTCTCTATTTCTGTCTGGATATCAATGTTGGCTACTAGTGCAGTTGCATCTTTGCCCAGATTACCACCAGTGAGAAGAGGTGACCACAGCATTGAAGAGAATGTTGTTACTACATCTAGAATACCAAGAGGATTACAGACGATTAATAATTCAATATCATTGAGTTGCACACAGTTTCCATTTGGTTCAAGAACTCATTCTACTCGGACAGCAGTTGTAATATGTGCTGCAGCTTTGAATGCAAGATGTTCTGCAGAGCAAACTCAAACTGTTACTCGAGAGGCTCCTACAATTACTCATATTCCTGGCAAGGAGAAGTCACCACAACTCGATGATGGTGGAACTGGATTTCCACCTCGTGATGATGATGATGGTGGCGGGGGAGGAGGAGGAGGTGGAGGCAACTGGTCTGGTGGATTCTTCTTCTTTGGGTTTCTTGCTTTTCTTGGCTTCCTAA | |||||||||
gi|227762041|gb|FS271985.1|FS271985 FS271985 TPC Glycyrrhiza uralensis cDNA clone kanzou014CF12.f1 5', mRNA sequence ACATCATCATCATCATCATCA EST sequence (targeted fragment marked with yellow): GCCCACCCAAATCGTGCTTCTTCTTCTTCTTTGAATCCCCAATTAGACGATGGAATACGATCACGAGAGCAAGAAGATGTGCAACCTTTTCGTGAAGCACTTGGACGGGAAAACTCTGACCCTATTATTCCCGTCTCCGATCCTCTACTCGAGTTCCATAAAGGACCGCCTCTTCGAACTCACCGGGATCCCTACCCAACACCAGCGCCTGGTGACCGGTTGCCGGCACCTTAACGACGAGAAATCGGCGATATGCTGTTCGCCGGAGGGCGGGAACATGTTCCCGTCGGTGCGGCTGCTGCTGCGACTGAAAGGAGGTAAGGGAGGGTTCGGTTCGCTTCTCCGAGGTGCGGCGACGAAGGCGGGGCAGAAGAAAACGAACAACTTCGACGCGTGTAGGGATATGAGCGGGCGAAGGCTGAGGCACGTGAACGCCGAGAAGAGGCTTGAGGAGTGGCAGGCTGGGGAAGAGGAGAGAAGGCTCGAGAAGATTGCTGAGGATTTTCTCAAGAAGCAGATGAAGAAGAAGGGTAAGGGGAAGAACGGTGATGTCGATGGTGAGGCACACAAGTATGTCGCTAAATATAGGGAAGAGTCTGAACGCTGCGTTGCAGAGGTTGCTTTATCCGTCGAGGACTCTCTCAAATATGCCTCTAAGCGCAAGTCTCCGCAATCACAAGCTTCCCCTCCCCGTGATGCCAAGAAGTTGAAGATATGGATGGGGAAGAGGACATTGGATGAAAGTGATAGTGATGATTCTGATGATGATGATGATGAGGG | |||||||||
gi|227787726|gb|FS242927.1|FS242927 FS242927 RPSC Glycyrrhiza uralensis cDNA clone KAN056-N03.F 5', mRNA sequence ACATCATCATCATCATCATCA EST sequence (targeted fragment marked with yellow): ATGAAGTTGTTGAAGAGCTCCAGAATTTGATGGAACATGATTATGACATTGGTTCTACAATCCGAGACAAAATTATTCCTCATGCTGTGTCATGGTTCACGGGGGAGGCTGTAGAGAGTGATTTTGAGGATATAGAAGCAGATGAAGATGATGAAGATGGTGATGGGGATAAAGATGAAGAGGAAGAGGATGAGGATGATGAGGAAGAGGAAGAGGAAGATGAAGGGAAGAGCAAGAGGAAAGTACGGATACAGCCTCCATAATTGGACATATTCTGTTCTCAAATCGTATTACTGCTTGTTGATTATGTATATTTGTATTAACTATCTGCTAAACTATTGGTATGACTGGTATTCTCACTATTTGTATACAATGTTTTGTTGGTCACTTGTTCTAAACTGTAGAGTGGTCGCAGAGCCCAACCCGGTAAAGATCAGCCAACGGAGCGCCCTCCTGAATGCAAGCAGCAGTA | |||||||||
gi|227758177|gb|FS273583.1|FS273583 FS273583 TPC Glycyrrhiza uralensis cDNA clone kanzou019DE03.f1 5', mRNA sequence ACATCATCATCATCATCATCA EST sequence (targeted fragment marked with yellow): TTCATGTTCTCCACCACCACCGCTGCCGGCGGAAGGCGAGCTCCCTCCTCCGCTGCTCGGCGTCGTCATTCTCGGAGAAGCACCACACGAACTCCCCCAAGTCAGACGACGCGGTGGAGCTCCCGCTGTTCCCGCTCCCGTTGGTGCTGTTTCCCGGCGCCATCCTCCCTCTCCAGATCTTCGAGTTCCGTTACCGCATCATGATGCACACTCTCCTCCTTCTTGATGATGATGATGATGGATTGGGTGTGGCGCAAACCAAAGGTATCGTTCGTTGCTTGTAACTTCGTTGCAGTGGCAATGGCACCAATATAATGCGAATAGTTGTACATTCTTTTCTTCATGTGTACTTTTCGTATGCTTAATCTGGTCTTCTGGTCATTTCATTTTGTGGTTCACCTTTATATACAATGAAGAAGATACTTGATAGTAGTAGATACGATTTGCC | |||||||||
gi|227796138|gb|FS259622.1|FS259622 FS259622 RPSC Glycyrrhiza uralensis cDNA clone S02198-12-H15 5', mRNA sequence ACATCATCATCATCATCATCA |