miRNEST 2.0: an integrative microRNA resource miRNEST 2.0, an integrative microRNA resource :: Browse




mature miRNA: CTTTGTATTCTTCCACAGCTT
species: Glycyrrhiza uralensis
database: miRNEST
The numbers on the right side of the alignments show a score calculated for them.
When calculating the score, a mismatch is given a score of 1, bulge: 2, and wobble: 0.5.

Predicted miRNA targets
gi|227770311|gb|FS271775.1|FS271775 FS271775 TPC Glycyrrhiza uralensis cDNA clone kanzou014AA08.f1 5', mRNA sequence

CTTTGTATTCTTCCACAGCTT
||||| |||||.||||||| .
GAAACCTAAGAGGGTGTCGTG

EST sequence (targeted fragment marked with yellow):
CCTATGTTTATGTTCGATCAACTCTCATATATAATACTGATCACCAGCAACAAGTAGAAGAAGAATCAATAGAAGGGAAGAATTAGAGCTACTATAGCTAGCGATGACGAAGATGAAGAATTGGTGGACAACAAGGTTGTCGGGGAAGATCAGCAACAAGCACGCAGTGAAGCTGAGCCAATTGAAGCTTGAATTAGGACTGTTTGGAACGCGAGTGGCTACCACAAACGACAAGGTAGCCATTGAGATAACAGGGATAGCAACTAGTGAGAAAGGGAAAGAACATAAACCTTCTTTTCCCTTTCATCGTACCTCAAAACGACGATGCACTCACACAACCTCCTGTCGTAGATTCCTCAGCGCAAGAACGCCATCTCTCGTTTGGGACGCCCGCGACCTCTGCGGTTTCAACCTCGTCCTCAAAGATTCCTGCGACATCACATTTCATGTCTTATATGGAGAGGGTGCTGTGGGAGAATCCAAAGGCAAAACGACGGTGGTCGGAAAAGTTTCCATGACCCTTGCCACGGCGGAGCTGCTACTCGTGGAGGAGATGAAAAGGACCGAATCAAATTCTCATCACCACCTTCAAAGAAGGCTTCCAATCCGATT