| mature miRNA: TGGAGTGGAGTGGAGTGGTGT species: Glycyrrhiza uralensis database: miRNEST The numbers on the right side of the alignments show a score calculated for them. When calculating the score, a mismatch is given a score of 1, bulge: 2, and wobble: 0.5. |
| Predicted miRNA targets | |||||||||
gi|227787903|gb|FS249298.1|FS249298 FS249298 RPSC Glycyrrhiza uralensis cDNA clone KAN075-O08.F 5', mRNA sequence TGGAGTGGAGTGGAGTGGTGT EST sequence (targeted fragment marked with yellow): GAATCAATCATTCACTTCACTTCACTTCACTTCACTTCACTTGTGCTCTGCTCTGCCCTGCGAGGTGTGCGTGCGCAGGTGGTTATAAGTAAGGCACGCCGCATAAGCTAGCTAGCATAAGACGATCATGGAGATCCATTTGGTTTTAGCCGTTGGATTGATCTGCAGTGTGGTGGTGTGCGTAGGAGGCCAGTCTCCATCCACCTC | |||||||||
gi|227805873|gb|FS245289.1|FS245289 FS245289 RPSC Glycyrrhiza uralensis cDNA clone KAN063-O11.F 5', mRNA sequence TGGAGTGGAGTGGAGTGGTGT EST sequence (targeted fragment marked with yellow): GGTCCCACTCACCTGCTTTAGTTTTGTCTCCTCAAATCCTCAAATCAAACGCGAAAAAAGAGGGTTTTTTTGGCTTACGGTTCCAGATCCTTCTCCTCCTAACTAATCCACTCCACTCCACAGGCACTACTTTAATTTTTCTAGTCTTAGATTGAAAAAAGTGGTGCGCTGCTATGGCTGATTGGGGACCGGTGGTGATAGCAGTGGTGCTGTTTGTGGTGTTGAGTCCGGGATTGCTGTTTCAGATACCAGGCAGGGGAAAGGTTGCTGAGTTTGGGAATATGCAGACAAGTGCTGCTTCCATTCTTGTTCACGCCATCATTTACTTCGGACTCATCACCATCTTCCTCATCGCCAT | |||||||||
gi|227771435|gb|FS288333.1|FS288333 FS288333 TPC Glycyrrhiza uralensis cDNA clone kanzou067AH08.f1 5', mRNA sequence TGGAGTGGAGTGGAGTGGTGT EST sequence (targeted fragment marked with yellow): ACACTCTCACACTCTTCTCCACTTCACTCCAAGCACCTTCTCTCTCTCTCTCTCTCTCCCAAAATGGGTCGCCACTCCCCATTCCTCCTCTTCCTCCTCCTCTCCCTCGCCGCCATTGCCTCCGCCCACAACATCACCGACATCCTCGCCGACAACCCAGACTACAGCGAGTACAACACCTTCCTTTCCCAAACAAAGCTCGCCGACGAGATCAACAGCCGCCAGACCATCACCGTCTTAGTCCTCAACAACGCCGCGTTCTCCTCCATCTCCTCAAAACACCCCCTCTCCGTCGTCAAAAAGGTCCTAAGCCTCCTCGTACTCCTCGACTACTTCGACAACACCAAGCTCCACCAAATCACCGACGGAACAACCCTCTCCACATCACTCTACCAAACCACCGGCAACGCCAACGGCAACGTCGGATCCGTCAACATCACCGACCTAAAAGGCGGCAAGGTCGGTTTCGGCTCCGCCGCACCGGGCTCCAAACTCGAATCAACCTACACAAAATCCATCAAACAAATCCCTTACAATATCTCCGTTCTCGAAATCAGTGCCCCTATTATAGCCCCCGGTATTCTCTCTGCTCCACCTCCGTCATCCGACGTTAACATAACGGCTCTCATTGAGAAAGCCGGTTGCAAGACGTTTGCGTCGTTAATCGTTTCTAACGGCCTTATTAAGACTTTTCAGTCAG | |||||||||
gi|227799739|gb|FS244729.1|FS244729 FS244729 RPSC Glycyrrhiza uralensis cDNA clone KAN062-D05.F 5', mRNA sequence TGGAGTGGAGTGGAGTGGTGT EST sequence (targeted fragment marked with yellow): GACTTTTTCCTTCTCTCCCTCCGTTCAATTTGTTCCTCACTGTTCGCCATTGTCGCGTTCTCTTCTCTTTTCGCGTTCGTTCCCTTCACTCCACTTCACTCCACTCCACGGTGCCACTGTTCCTCTGCACTCCGTCACTCTGAAACCCGTCGTGCTCCATCGCTGCTTTCTTCTCCCAAGCTCCGTTAAGCTTGCTCGCTTGCTGCCCCGTTCCAAGCTCCGTCCACTTCTCCTCCTCTGCTGACGGCAACGAGAAGAAGTTGCAACCGCGGATGGCAGCCACCTTTCCCTCTCGATTCAGATTAGGGTTTGGAAGCTGCACCCATGAAGGAACCCTTACGGTTCCTACTAAGTGTATTTGGGTGGATTTGATAACACGCATGCTGCGGCAAAGTAAATTTCATAGTTAGGATGTCTACATGCCGGTTACAAAT | |||||||||
gi|227770566|gb|FS268284.1|FS268284 FS268284 TPC Glycyrrhiza uralensis cDNA clone kanzou002AF11.f1 5', mRNA sequence TGGAGTGGAGTGGAGTGGTGT EST sequence (targeted fragment marked with yellow): GTCGAGTATCACACATCATCAACGGCCTCCTCTTCTTATCAATATCATCATCAGTTCATCACCAAGCCCAGTTTGGTTATCCTTCTCTGATCTGGTAGATAGATAACATTAACATTGATTGCATCACCACTCCACTCCACTCCACCACCGACATCAGAAGTAAGCAAGTAAACACACTCGGTCTCCCTTTTCTACCCCACCATGGCCGCAACGCTTTCCCTCTCCTTCCCCTCCTTAGAAATTCAAAACCGCTTCTTCACCACCGCCACTCCCTCCAAAACGCGACCCTTCTATCCCTCAACTCCTCCCCTCCACAACAACCACAAATATTACCCACTCCCCAATAATCCCCACTTCAAAATCTCCTCTTCCTCCCACTCTTCTTCCCCTTCCCCCACCACACTCGACGCCGACCCGTTTTACCGGCCGGGCCGGTTCCTGACGAACGAGGAGCTCCAAAGGCTCAACTCCCTCGAGGGCTTCCTCTACTCACACGAGCTCGAGTCAGGGTCCGTGTGGGTCCGCGTCATGAGGGACGACGAGGTGGACCCCACGGTGCGCCTCCTCGCCGAGTCGTTCGCCGAGTCCATGATGTTCCCGTCGGGTTACGTCAACGTGCCGAGGTTCCTGGTGAAGCAGTACTTGATGGAGC | |||||||||
gi|227782730|gb|FS249407.1|FS249407 FS249407 RPSC Glycyrrhiza uralensis cDNA clone KAN076-D20.F 5', mRNA sequence TGGAGTGGAGTGGAGTGGTGT EST sequence (targeted fragment marked with yellow): GATGTTCCATTCCGCTCCGCTCCACTTCATTCCATTCTATTCCATTCCACTCCGCTCCGCTCATTTTAAGATATCCAAACATACCCTAAAACAATGCAAATAAGCAACACATAAAAAAAAAAAGCAACCGTGTCACATCACAGACACACTCACACGGCACTGAGAGAACAAAAGGAAAGGTAGAAACACAAAAACCGATTACGAGTGGGAGCGATCAATCAATTGAGAATGCCACCGAGGCGGTGCCCAATGAATAGGACAATGAATAGGTTTGATTATGGTGGTGGTACTGGTAGCGACATCGACGATTACGACTACCCAGGGGAAGAGGAGGAGGAGGAAAACGTGACGATGATGCGGTGTCTCTCTTGCGATGAACACTACGAACCCGAAGACGCTGGAAGCTGCAAAGAGTGCTTCGGCGAGGCCAACGAGAAAGAGGAGGGACTCATGCTCCAGATCCAAGAACTCAAATCGAAGGTTTCCTTCCTCTCTCTTTCCTCTCCCCTCGATGCTCCTTCCACCACCGATCTCGTCCTTCTTCCCTCCGCCGATGACGCCTTCTCTTCCCCTGTTCCCGCTCACAGGGCCGTTCTGGTTAGTCGCTCTCCTGTTTTTAGAGC | |||||||||
gi|227771804|gb|FS272815.1|FS272815 FS272815 TPC Glycyrrhiza uralensis cDNA clone kanzou017BE08.f1 5', mRNA sequence TGGAGTGGAGTGGAGTGGTGT EST sequence (targeted fragment marked with yellow): AGATCCTTCTCCTCCTAACTAATCCACTCCACTCCACAGGCACTACTTTAATTTTTCTAGTCTTAGATTGAAAAAAGTGGTGCGCTGCTATGGCTGATTGGGGACCGGTGGTGATAGCAGTGGTGCTGTTTGTGGTGTTGAGTCCGGGATTGCTGTTTCAGATACCAGGCAGGGGAAAGGTTGCTGAGTTTGGGAATATGCAGACAAGTGCTGCTTCCATTCTTGTTCACGCCATCATTTACTTCGGACTCATCACCATCTTCCTCATCGCCATTGGCGTTCACATCTACACTGGGTAAAACTCTGTACTTTCATATTCTCAATACGGAGGGGTGGATCTCAATAGGATGTCTTTTTGGTTATGTTTTTACCTGCTTTTTCAGTTTTAACGTTCCCTTGTATGTGTGTACTGCATCTGCATCTGTATCATGTGGCCTAGCTGGAACCCTGCGATACTCCCTTTTTTGGTACTTGATGATACTTCCCTAATCCCCACCTCCCCCTCCTCAAAGAAGAAAGGGATAAGGAGGATATTGTTGCTTTGTG | |||||||||
gi|227795319|gb|FS244415.1|FS244415 FS244415 RPSC Glycyrrhiza uralensis cDNA clone KAN061-D22.F 5', mRNA sequence TGGAGTGGAGTGGAGTGGTGT EST sequence (targeted fragment marked with yellow): GACACTCTCACACTCTTCTCCACTTCACTCCAAGCACCTTCTCTCTCTCTCTCTCTCTCCCAAAATGGGTCGCCACTCCCCATTCCTCCTCTTCCTCCTCCTCTCCCTCGCCGCCATTGCCTCCGCCCACAACATCACCGACATCCTCGCCGACAACCCAGACTACAGCGAGTACAACACCTTCCTTTCCCAAACAAAGCTCGCCG | |||||||||
gi|227764606|gb|FS277916.1|FS277916 FS277916 TPC Glycyrrhiza uralensis cDNA clone kanzou033CD09.f1 5', mRNA sequence TGGAGTGGAGTGGAGTGGTGT EST sequence (targeted fragment marked with yellow): ACTCTCACACTCTTCTCCACTTCACTCCAAGCACCTTCTCTCTCTCTCTCTCTCTCCCAAAATGGGCCGCCACTCCCCATTCCTCCTCTTCCTCCTCCTCTCCCTCGCCGCCATTGCCTCCGCCCACAACATCACCGACATCCTCGCCGACAACCCAGACTACAGCGAGTACAACACCTTCCTTTCCCAAACAAAGCTCGCCGACGAGATCAACAGCCGCCAGACCATCACCGTCTTAGTCCTCAACAACGCCGCGTTCTCCTCCATCTCCTCAAAACACCCCCTCTCCGTCGTCAAAAAGGTCCTAAGCCTCCTCGTACTCCTCGACTACTTCGACAACACCAAGCTCCACCAAATCACCGACGGAACAACCCTCTCCACAACACTCTACCAAACCACCGGCAACGCCAACGGCAACGTCGGATCCGTCAACATCACCGACCTAAAAGGCGGCAAGGTCGGTTTCGGCTCCGCCGCACCGGGCTCCAAACTCGAATCAACCTATACAAAATCCATCAAACAAATCCCTTACAACATCTCCGTTCTCGAAATCAGTGCCCCTATTATAGCCCCCGGTATTCTCTCTGCTCCACCTCCGTCATCCGACGTTAACATAACGGCTCTCATTGAGAAAGCCGGTTGCAAGACGTTTGCGTCGTTAATCGTTTCTAACGGCCTTATTA | |||||||||
gi|227796638|gb|FS259710.1|FS259710 FS259710 RPSC Glycyrrhiza uralensis cDNA clone S02198-12-M14 5', mRNA sequence TGGAGTGGAGTGGAGTGGTGT EST sequence (targeted fragment marked with yellow): AGAGGTGACGAGCCTGGACGCGTCGTCGACCACGCGATCCCCACGGCGGGCACCAGCGTACTACGTGCAGAGTCCATCCCACGATGGGGAGAAAACGACGACGTCGTTTCACTCCACCCCAGTTCTCAGCCCAATGGGTTCCCCTCCCCACTCCCACTCTTCCTCCAGCCGCTTCTCCGGTTCCCGCAAGATGAACCGT | |||||||||
gi|227799739|gb|FS244729.1|FS244729 FS244729 RPSC Glycyrrhiza uralensis cDNA clone KAN062-D05.F 5', mRNA sequence TGGAGTGGAGTGGAGTGGTGT EST sequence (targeted fragment marked with yellow): GACTTTTTCCTTCTCTCCCTCCGTTCAATTTGTTCCTCACTGTTCGCCATTGTCGCGTTCTCTTCTCTTTTCGCGTTCGTTCCCTTCACTCCACTTCACTCCACTCCACGGTGCCACTGTTCCTCTGCACTCCGTCACTCTGAAACCCGTCGTGCTCCATCGCTGCTTTCTTCTCCCAAGCTCCGTTAAGCTTGCTCGCTTGCTGCCCCGTTCCAAGCTCCGTCCACTTCTCCTCCTCTGCTGACGGCAACGAGAAGAAGTTGCAACCGCGGATGGCAGCCACCTTTCCCTCTCGATTCAGATTAGGGTTTGGAAGCTGCACCCATGAAGGAACCCTTACGGTTCCTACTAAGTGTATTTGGGTGGATTTGATAACACGCATGCTGCGGCAAAGTAAATTTCATAGTTAGGATGTCTACATGCCGGTTACAAAT | |||||||||
gi|227770447|gb|FS284455.1|FS284455 FS284455 TPC Glycyrrhiza uralensis cDNA clone kanzou054DB10.f1 5', mRNA sequence TGGAGTGGAGTGGAGTGGTGT EST sequence (targeted fragment marked with yellow): ACTCTCACACTCTTCTCCACTTCACTCCAAGCACCTTCTCTCTCTCTCTCTCTCTCCCAAAATGGGTCGCCACTCCCCATTCCTCCTCTTCCTCCTCCTCTCCCTCGCCGCCATTGCCTCCGCCCACAACATCACCGACATCCTCGCCGACAACCCAGACTACAGCGAGTACAACACCTTCCTTTCCCAAACAAAGCTCGCCGACGAGATCAACAGCCGCCAGACCATCACCGTCTTAGTCCTCAACAACGCCGCGTTCTCCTCCATCTCCTCAAAACACCCCCTCTCCGTCGTCAAAAAGGTCCTAAGCCTCCTCGTACTCCTCGACTACTTCGACAGCACCAAGCTCCACCAAATCACCGACGGAACAACCCTCTCCACAACACTCTACCAAACCACCGGCAACGCCAACGGCAACGTCGGATCCGTCAACATCACCGACCTAAAAGGCGGCAAGGTCGGTTTCGGCTCCGCCGCACCGGGCTCCAAACTCGAATCAACCTACACAAAATCCATCAAACAAATCCCTCACAATATCTCCGTTCTCGAAATCAGTGCCCCTATTATAGCCCCCGGTATTCTCTCTGCTCCACCTCCGTCATCCGACGTTAACATAACGGCTCTCATTGAGAAAGCCGGTTGCAAGACGTTTGCGTCGTTAATCGTTTCTAACGGCCTTAT | |||||||||
gi|227786180|gb|FS249136.1|FS249136 FS249136 RPSC Glycyrrhiza uralensis cDNA clone KAN075-G08.F 5', mRNA sequence TGGAGTGGAGTGGAGTGGTGT EST sequence (targeted fragment marked with yellow): GATCTCACACACTCACACTCCTTTCAACGGCTCAATCAATCAAAAAACACACCCCACTCTCTCCCTCACCTCACCCCTTACCCACTCTCCTTTTTCTAATTCCAAGTTCACACTTGCCTTGAAGCTGTTGAGCACATCCAAAATCTATTCTTCCACAGTCCCCATCCGTCACTGCATCATCACCACCACCATATATTATAATTATAATTATAATATTAACAACATAGATTGTTAATAGATATAGGCCACTCCACTCCACTCTGTGTTACTCACCAGTTACCACTACCTCCCTCCAAGTTAAGTAGGTGGGAGAGAAATATGGCTTACATGTGTACAGACAGTGGGAACCTCATGGCTATTGCTCAACAAGTCATCAAGCAGAAGCAGCAACAAGAACAGCAAGAACAACAGCAACACCAACACCTCTTGGGTAGTACTATCACCACCCCTCTCTCTCTCCACCACCCATGGA | |||||||||
gi|227782730|gb|FS249407.1|FS249407 FS249407 RPSC Glycyrrhiza uralensis cDNA clone KAN076-D20.F 5', mRNA sequence TGGAGTGGAGTGGAGTGGTGT EST sequence (targeted fragment marked with yellow): GATGTTCCATTCCGCTCCGCTCCACTTCATTCCATTCTATTCCATTCCACTCCGCTCCGCTCATTTTAAGATATCCAAACATACCCTAAAACAATGCAAATAAGCAACACATAAAAAAAAAAAGCAACCGTGTCACATCACAGACACACTCACACGGCACTGAGAGAACAAAAGGAAAGGTAGAAACACAAAAACCGATTACGAGTGGGAGCGATCAATCAATTGAGAATGCCACCGAGGCGGTGCCCAATGAATAGGACAATGAATAGGTTTGATTATGGTGGTGGTACTGGTAGCGACATCGACGATTACGACTACCCAGGGGAAGAGGAGGAGGAGGAAAACGTGACGATGATGCGGTGTCTCTCTTGCGATGAACACTACGAACCCGAAGACGCTGGAAGCTGCAAAGAGTGCTTCGGCGAGGCCAACGAGAAAGAGGAGGGACTCATGCTCCAGATCCAAGAACTCAAATCGAAGGTTTCCTTCCTCTCTCTTTCCTCTCCCCTCGATGCTCCTTCCACCACCGATCTCGTCCTTCTTCCCTCCGCCGATGACGCCTTCTCTTCCCCTGTTCCCGCTCACAGGGCCGTTCTGGTTAGTCGCTCTCCTGTTTTTAGAGC | |||||||||