| mature miRNA: TTCCACAGCTTTCTTGAACTG species: Gossypium hirsutum database: miRNEST The numbers on the right side of the alignments show a score calculated for them. When calculating the score, a mismatch is given a score of 1, bulge: 2, and wobble: 0.5. |
| Predicted miRNA targets | |||||||||
gi|164322349|gb|EV496496.1|EV496496 sg090E09 Cotton Lambda Zap Express Library Gossypium hirsutum cDNA, mRNA sequence TTCCACAGCTTTCTTGAACTG EST sequence (targeted fragment marked with yellow): AACTATGCTATGGCCGAGGACCAGGCTATCCTGATGAATCGAAAGTACACGTATTATTGGAGAGAGACAATTCAATAAAGCTGTGGATCTGTTTAACACAGCATCTGAGCAATTAAAAGGAAAGGTTGATTATCGCCACTCATATGTAGACTTTTCCCAGCTTGAGGTTACAATTCCTAAAGAAGGAGGAGGTTCTGAGGTAGTTAAAACATGCCCCGCTGCAATGGGATTTGCTTTTGCAGCAGGAACAACTGATGGCCCTGGGGCATTCGATTTTAAGCAAGGAGATGACAAGGGAAATCCTTTCTGGAGGCTTGTGCGCAACTTACTTAAAACTCCTGATAAAAAACAAGTACAGTGTCATTCTCCAAAGCCCATCTTGTTAGATACTGGTGAAATGAAGCAACCATATGATTGGGCGCCTTCAATACTTCCAGTACAGATCTTTCGGATAGGACAGCTAGTCATTCTCAGTGTACCTGG | |||||||||
gi|78347775|gb|DT568049.1|DT568049 EST1078689 GH_TMO Gossypium hirsutum cDNA, mRNA sequence TTCCACAGCTTTCTTGAACTG EST sequence (targeted fragment marked with yellow): TTTGAGTTTTAATATCTCTCTCAAATCAGACCAAGATCTGATGTAACTCTTTATTCCTCTACACCCACAAATTTTTATTCCTCAAAAATCCATTTTAATAGTGCTATCTATGTCCCTCTCACATCACATAAACTAAACCAAAATCCATCATTATCAAGTGATTAGAGGACAATCATATCCCTCCCTTGGCGGAAGAGTTTAGGTTGTATGATTCCATAGGTTTTCTAAGAAAAGAAAATGACAAGGTGTTTCAGCTTAACCGCAGCCAGAAACCGGTGTTACAAATCATCATTCCTCAAAGCGGGGCTTCGATCCACCATCACGGACCTCCAAGATGGCACCGTCATGCACTGTTGGGTCCCCAAGACACATAATGACTCCAAGCCTAACCTCCTCCTCATCCATGGACTGGGAGCCAACACAATGTGGCAATGGGGTGACACCATTCGTAAGATGATCCCTTTCTTCAACATCTTCGTACCCGACCTTGTCTTCTTCGGGGACTCCTACACGACTCGGCCTGAACGCTCCGAATCGTTTCAGGCTCAGTGCGTGATGCGAGTGATGGAAGCCAACTCGGTGAAGAAACTCAGCCTGGTAGGCCTCAGCTATGGTGGGTTTGTTGGGTACAGTTTAGCAGCGCAGTTCAGTGAAGCTGTTGAGCGAGTGGTGATCTGCTGCGCTGGAGTTTGCATGGAAGAGAAAGATTTGAAGGAAGGAGTTTTCAAGGTATCTGATTTGGAAGAAGCTGCCGATATTTTAGTACCCCAA | |||||||||
gi|109854398|gb|DW483377.1|DW483377 GH_RMIRS_041_E04_F Cotton Normalized Library random primed Gossypium hirsutum cDNA, mRNA seq TTCCACAGCTTTCTTGAACTG EST sequence (targeted fragment marked with yellow): AATGTAGCTATAAATACAGAGTCATCATCCTCAGGGCTTGTTTCTGCTCTTCTTATCAAAACCCTTTTTTTCTTAATCAAATCTGGTTCAGTTCGCATAATAGTAACGCATAAAAGTATGGTTGAGAGGATTTTATTACTAGTTCTTTTTATGAATGCTGCCTTTTTAATAGTGAATGCTGTACCAGAAACATGCCCTGCTGATCTCGGTGGAAAATGTGGTGAAGATAGTGAATGGGAAGGGGAATTTTTCCCTGGAGTTACTAAAATTAAGTATGAGGGTCCTTCTAGCAAGAATCCACTTTCATACAAATGGTACAATGCAGAAGAAGTGATTCTTGGGAAGAAAATGAAGGACTGGTTGAGATTTAGTGTTGCATTTGGCATACATTTCGTGGAACAGGTGCCGATCCTTTTGGTGCACCCACAAAGTCTTGGCCATGGGAAGATGGTACCAATTCCATTGCTATGGCCAAAAGAAGAATGAGAGCCAACTTCGAATTCCTAAACAAGCTTGGAGTTGATAGGTGGTGTTTCCATGACAGGGACATTGCTCCTGATGGCAAAACACTAAAGGAAACTAATTCAAACTTGGATGAAGTCGTGACACTTGCTAAAGAGCTTCAGGGGGACAAGATCCGTCCACTGTGGGGTACTGCTCAACTATTTATGCATCCTCGTTACATGCATGGTGCTGCTACAAGCTCTGAGTTGGGTGTTTATGCCTATGCTGCTGCTNCAGTTAAGAAAGCTATGGAGGTGACACATTATCTTGGGGAGTTGTCTCGTCCTCTGCCTGATG | |||||||||
gi|109845442|gb|DW244000.1|DW244000 GH_TSnorm_01-01-15R_B10_InvR_25Feb04_078_R Stem (norm) - 3-5 weeks after planting Gossypium TTCCACAGCTTTCTTGAACTG EST sequence (targeted fragment marked with yellow): AGAAATGAGGTAGAAATGGCTATTTACCAACCCCATTTTCTTTATCTAATTAATTAATTAGTCTATTAAGAGTTAACCCTTAATTTTTCACCTGCCCTTGCTCATTGTCAATACACAAAATCTATACATACACATATAATTAATTAGATTATTCACTAATAATCACCATAAGTTTTCAATTTCTTCCAATCCTTAATGAAGAATCAACTCCTTTATTTGATCCTGCAAAGAGCCTAGCAATTTCCAATTGAGTGTTGGCAATGATCTCAGTTCTTTTGAGGTCCATTTCTCCTCTTTTAGCCTCAGCTTCAACCCTCATTTTTTCGATTTCTTTCATTGTTTCCATCCTTGCTTGTTCTGATTTTAAAACTACTTGTGCTAGCCATTGAATGCTCCCTCCAATTTCACACTCTTCTTTCCTTCTCTTCTTCTTCTTCATCATCGTTGCCATCGTCTCTATTTTCATCTTTGCTTTCTTCGATCTCGGTCTTTCTCTGTCGCTATAAAGAGCAGGCGTACTACTATCTGTCTCCATAGCTATCTTGTCCGATAAACGACCCGATGACTTTGTACCGGCTCCATCCTCCTTGGGGATCCTATCAATACCATTGGAATCGTGTGAATTTTGTGTAGTTCCAGGAAGCTGAGGAGCCAAATGTGGTGGTGGTG | |||||||||
gi|109858548|gb|DW487527.1|DW487527 GH_RMIRS_064_D05_R Cotton Normalized Library random primed Gossypium hirsutum cDNA, mRNA seq TTCCACAGCTTTCTTGAACTG EST sequence (targeted fragment marked with yellow): ATCAGGCAGAGGACGAGACAAAAGTATGGTTAAGAGAAGTTAAAACCAACAGCTTATGGTCTTTTGCACTTACATGGTCAGTATTCAATTACATAGAACTTGCACTAATCCCACGATTCGCACGCTAAATTAATATTAAGAAGGAAAAAGGAAAAACAGAAAGGTAAAGAAGAAGAAGAGAAATTTTGCAGTACTGTTATGGTTTGTGTGTGTTTACAATAGAAAAGGTTATATATGAGGTAAAATTAGCAAAAACAAAATCAAAGTTCTAGTAATCTTGAGCATAGAAGTCAATAATATCGTGGAGATCAAGTTGAGACAAAGAAGAAGAATCATTGTTCATCAACCACAGCATGTGCTCAAACAAGATAGCATCCACGTCCACGAATATCACCTTCTTTTTCTTCTCCCTTGTTGCATGGCTGCCATTCCCTTTCTTCAATGTTTCCATCAAAACCCGGAACGGACTCTCCTCTAACACCAAAGGGTCCACCCAAAATTCTCGTTTCTCTTTCCCTACCACCACCCTCACTTGTGGCTCCAACTCGCGCGTTAGACGCCGGTAGCCTAGCCGTGATCCCATGCTGCGCTTTCCCAATAAGCAAACAGGCAATACCAAGCAATCCATGAGTTATGGGTAGGGAAATGAAGTAATTTATATGGATGTGAAAAAGTGGGTGTTTTTGGGTTAAGAAAGTTGTGGGACTTGAGAGTGAAAGTGAAGGAGGAAAAATTGTGATTGACAAGCTTTTGTTGGGATTGAATGGGCCCAGCAACGGCTAGT | |||||||||
gi|109831858|gb|DW230417.1|DW230417 GH_OVfbl_01-01-10R_E08_InvR_28Jan04_056_F Ovules - day of anthesis from a fiberless mutant G TTCCACAGCTTTCTTGAACTG EST sequence (targeted fragment marked with yellow): GGTAAGAGCCTCCTCCGACGAGGATATGCAACCGCCGTACCTGAACGGAAAGTCGCTGTCTTGGGCGCAGCTGGAGGGATCGGCCAACCCTTGGCTCTCCTCATGAAGCTTAACCCTCTTGTTTCTCAACTGGCTCTCTATGATATCGCTAACACTCCCGGTGTTGCCGCTGATGTCAGCCACATCAACTCTAGATCTGAGGTTGCCGGATATGTAGGTGAAGAGCAGTTGGGGAAAGCTTTGGAGGGATGTGATGTTGTCATCATTCCAGCTGGGGTGCCTAGAAAGCCCGGTATGACTCGTGATGATCTTTTCAACATTAATGCCGGAATCGTCAAGGGTCTATGTTCTGCAATTGCTAAATATTGCCCCAATGCACTTGTCAATATGATCAGCAACCCTGTCAATTCAACTGTTCCTATCGCAGCTGAGGTTTTCAAGAAGGCAGGGACATATGATGAAAGAAAGTTGTTTGGTGTAACCACCCTTGATGTGGTTCGGGCTAAGACTTTCTATGCTGGGAAGGCTAAAGTAAATGTTGCAGATGTTAATGTCCCTGTTGTTGGTGGTCATGCTGGAATTACCATTCTCCCACTATTTTCTCAAGCCACACC | |||||||||
gi|164330663|gb|ES840539.1|ES840539 UFL_066_24 Cotton fiber 0-10 day post anthesis Gossypium hirsutum cDNA, mRNA sequence TTCCACAGCTTTCTTGAACTG EST sequence (targeted fragment marked with yellow): ATTCTTGTCTTTCTTTTTCTCTTCCTTGCAGTTTTCCCCTGAATACCGAACAACACAAAAAGACTTACCAGATGGGCAAGGCAGAAAACAACCATAACATGGAGGAGGGAACGCTAGAGATCCGCATGGAATATAGAACTGTTTCCCGAGTGGCTGGGCCATTGGTAATCCTTGATAAAGTGAAGGGACCCAAGTATCCAGAAATTGTTAATATTCCTTTAGGGGATGGAACCACCAGACGTGGTCCAGTCCTAGAAGTTGATGGAGAATAGGCTGTTGTTCAGGTATTTGAAGGAACATCTGGAATTGACAACAAATATACGACCGTGCAATTTACAGGAGAGGTTTTGAAAACTCCTGTTTCTTTGGATATGCTTGGGCGCATTTTCGGGGGGGGGGGGAGGCCATCCATAACGGGCCACCTATCTTGCCTGAAGCATATTTGGATATTTCTGGGAGTTCTATTAATCCTAGTGAGAGAACCTATCCTGAACAAATGATACAGACCGGGGATTTCAACCATTGATGTTATGAATTCCATTGCTAGAGGGCAAAAGATCCCTCTCTTTTCTGCTGCTGGTCCTCCCCACTATGAAAATTGCTGCCCCAGATTTGTCCCTCCGGCTGTTTTGGTGAAAACCATTCGAGAAAGCTGGGGAATCTTCTTGAGGATGGTGAAAAACATAATTTTCGCCATTGTGTTGCCGCCATGGGTGTAACGTGGAAACTGCCCAGTTTTTCCAACCGTATTCTGAGGAAAATGGGCCCAGTGGAAAGAGTGACCCTTTTCCTAAACCTGGCTACTACCCCCCCCATTGAGCGTATTATTCCCCCTCCGATTGCTCTCCCCACCGGTTAAAAACCCCGCACTATCACTGGCCGCAAACCCTTGTCCTCTAAATTCCTACGGAGCTGAACGTCCTTATCGCCGACGCCCCTCCCGAGAGGTTTCCCGCCTCCCCCAAA | |||||||||
gi|164314251|gb|ES840464.1|ES840464 UFL_065_41 Cotton fiber 0-10 day post anthesis Gossypium hirsutum cDNA, mRNA sequence TTCCACAGCTTTCTTGAACTG EST sequence (targeted fragment marked with yellow): GGCACGAGGATTTATGGAAGATTGGTTTGAGCAGAACAGTGCTAAAAGTGATGAATTGGATACTGATGAAATACCTCGAAGAGTTTCGAGCATCATTTCTAGTATTCATAATAATCACCATGAGTTGCTGGAGCTTGCTTCATCCTTCCAGTCTTCTCCTGGTAAACCTGCAACCAGGGTTTCGAGTGCTGCTAGACGTGTCAGGAGTGCTCTTCGACAGGCTGACAAGCCAGGATTTGTGTCTGCATTTTGCCAAACAAATTGTGGTGATGTTAGTCCCAATGTACTTGGAGCATTTTGTATTGACACTGGTGTTCCTTGTGACTTCAATCATAGTACCTGTGGTGGAAAGAATGAACTATGCTATGGCCGAGGACCAGGCTATCCTGATGAATTCGAAAGTACACGTATTATTGGAGAGAGACAATTCAATAAAGCTGTGGATCTGTTTAACACAGCATCTGAGCAATTAAAAGGAAAGGTTGATTATCGCCACTCATATGTAGACTTTTCCCAGCTTGAGGTTACAATTCCTAAAGAAGGAGGAGGTTCTGAGGTAGTTAAAACATGCCCCGCTGCAATGGGATTTGCTTTTGCAGCAAGAACAACTGATGGCCCTGGGGCATTCGATTTTAAGCAAGGAAATGACAAGGGAA | |||||||||
gi|109872689|gb|DW501664.1|DW501664 GH_TMIRS_058_H08_F Cotton Normalized Library dT primed Gossypium hirsutum cDNA, mRNA sequenc TTCCACAGCTTTCTTGAACTG EST sequence (targeted fragment marked with yellow): AGGAAAAAGAAAAGAAAGAACAAAAAACATGGCTCTCTTCGTATTCTTCCACAGCTTTCTTGAACTGCAATTTCATGTAATCAGATCATTCATTCATTCGTTGTCGTTGATGGTGCTGCATATATACGAGTACGTTGTTGCGGTTCAATAAAGCTGTGGGAAGATACAAACAGGGTCAAAGTCAAAGTAAAAAAGTCAGTGATTTGAAAAATTCAATGTTAATTTCTTCTTTACATGATCTGAATATGTTTTTCTCTGTGTTCTTTTATATACAATTAAAGCTTACGTTACAATTTAGAGCATGTTAATTCTAAGACTCGAACTTGGTCTC | |||||||||
gi|109857005|gb|DW485984.1|DW485984 GH_RMIRS_055_H07_F Cotton Normalized Library random primed Gossypium hirsutum cDNA, mRNA seq TTCCACAGCTTTCTTGAACTG EST sequence (targeted fragment marked with yellow): AAAAAAACCCACTAAAAAAAACTCTGCGATTCCCCAATAGAGACACAGATAACCTTCCAGAAGTCGCCGCTTTTCAACAGTGTGAATTTGATGAATTTAGTTTAGAAAGTTGTGGAAATCTGCAATCTTTCTTTGATCTTATCCTTTTTTTGGATTAATTTGCAATAAACTAGAAGATTGAGCTATGAAGGAAGAAGATGTGAACCGTTGCCAGATTCAAGAATGGTACCCAAAATTTAAATCAGTGTCGATTAGGACATTCATTCATGAGCTTCCTGAATCTTTTGTCCAGTACCTACTCGATGATTCAGGACCTTTCCTCCTTCCTGCTTCAATCTCAAACGAGGATGCCTTTCCGAATAGAATTCATAATCCAGAAGAGGAGGAAGATTATCAAGTATCAGAAGGATCCGGAGATGGAGCAGAAGCTTTATCGGCCCCTTGTTTCCCAGAACTTGAGTTGAAGATTAAGGAGTCAATTGAAACCCTTGGGGGTGCAATCTTTCCTAAGTTGAATTGGAGTGCACCCAAGGACTCTGCATGGATAAGCACCTCTGGGACACTCCGATGCACTACATTCAGCGAGATTGCTCTCTTGCTTCGTTCATCTGACTCTTTGATCCATGATCTATGTCATGCATATGATTCATGCAGTGACAAAACCATGTCAAGCCCCCCCTT | |||||||||
gi|164365146|gb|ES850412.1|ES850412 UFL_665_22 Cotton fiber 0-10 day post anthesis Gossypium hirsutum cDNA, mRNA sequence TTCCACAGCTTTCTTGAACTG EST sequence (targeted fragment marked with yellow): CTCCCCCAAAACCCTCACCACAAAAGAAATCTCTTCTATTTTTCCCCACTCTACTGCAAAAATGTTTCGATCCGTTGCTAGATCGGCCGCCGGTAAGAGCCTCCTCCGACGAGGATATGCAACCGCCGTACCTGAACGGAAAGTCGCTGTCTTGGGCGCAGCTGGAGGGATCGGCCAACCCTTGGCTCTCCTCATGAAGCTTAACCCTCTTGTTTCTCAACTGGCTCTCTATGATATCGCTAACACTCCCGGTGTTGCCGCTGATGTCAGCCACATCAACTCTAGATCTGAGGTTGCCGGATATGTAGGTGAAGAGCAGTTGGGGAAAGCTTTGGAGGGATGTGATGTTGTCATCATTCCAGCCGGGGTGCCTAGAAAGCCCGGTATGACTCGTGATGATCTTTTCAACATTAATGCCGGAATCGTCAAGGGTCTATGTTCTGCAATTGCTAAATATTGCCCCAATGCACTTGTCAATATGATCAGCAACCCTGTCAATTCAACTGTTCCTATCGCAGCTGAGGTTTTCAAGAAGGCAGGGACATATGATGAAAGAAAGTTGTTTGGTGTAACCACCCTTGATGTGGTTCGGGCTAAGACTTTCTATGCTGGGAAGGCTAAAGTAAATGTTGCAGATGTTAATGTCCCTGTTGTTGGTGGTCATGCTGGAATTACCATTCTCCCACTATTTTCTCAAGCCACACCAAAAGCCAATTTACCTGAAGAGGATATCAAGGCTCTCACAAAGAGGACACAAGATGGGGGCACTGAAGTTGTGGAAGCCAGGCTGGAAAGGGTTCAGCAACATTATCAATGGGCTATGCTGGAGCCATTTTCGCTGATGGCTTGCCTTAAGGGAATGGATGGCGGTTCCCGACGTAGTGGAGTGCTCATTTTGTGCAGTCAACTGGTACTGAACTCCCTTTTCTTTGCTTTCCAGGGGGAGGGTTTGGAAAGAACGGGGGGGGGAGGAAAGTTTTGGGGGGTTAGGGGCCCTCCCCTCTGGAATACCAAAAAAAAAAAGGGGGTTGGGAAAAAGCCTTCAAACCCAAAAAACTTAAAATTCCTCCTTTTTTTGGAAAAAGGGGGGATACAAGGGTTCTCGCCCCAACCCCAAAAAAATTTAAACCCCCGGGAAAACCTACTTTTTTTTGAAAATTTTTTTTTTCCCCTTTTTAACCCCCCCCCACACCCCCCAAAAAAATTTTTTTTTATTAAAAAAAAAAAAAGTTTTTTTTTTTTTTTTTTTTTTT | |||||||||
gi|164338041|gb|ES814410.1|ES814410 UFL_211_54 Cotton fiber 0-10 day post anthesis Gossypium hirsutum cDNA, mRNA sequence TTCCACAGCTTTCTTGAACTG EST sequence (targeted fragment marked with yellow): GGCACGAGCGAGAGATAATCTTGGAGTGCACGTCAAGCAATCTTCATAAACAAGAATTCACCTCCGAACCATCTCAACCGGGTAAGCACGACGACAGAAGCCAATGCAATGGAGATTTAAAGCTAATACATGCACCAGAAACACCACAAAAGGCGACGATGGAGACTAAACGGAGACTCCAACCCGAAAACCGAGTCAAAACAACAGAAAACGCGCAAGAAAGATCGATAATGAACACATTAACGATGCTCCACGATTACGAGAAAAAGATCAAACAAGATCCTCAGAGCTTAGAAAGAGCTGAAGCATTGGAATCATTGTTGGAGATTTGTGCTAGTTTACTTAAACAGCAAAGACTTGAGGAACTTGCAGGGGTTTTAAGACCATTTGGTGAAGAAGCTGTTTCATCAAGAGAAACAGCAATTTGGTTAACAAAGAGTTTGATGAATGCTAAAAGCAAAATCCCAATAGATCATAGGAAATGAATTGTGAGTTTTTAACAAAAAAATCCAGCAATAGGTAACTCAATGATGTTTTTTTTTGTGTGGTTTTTTTTTTTTAATTTTGCTATTAGTTTTTGTAGTTCGTGAAAGTTGTGGATTTAATTCCTATAATTTAATTAATTTTAATCCATGCAAAAAAAAAAAAAAAAAACTCGAGTGAGTTTGGAAATGTTAGCTTCTAATTGTCCAAATTTAGAACGGTTAGCCTTATGCGGTAGCGATACAGTTGGTGATGCAGAGATATCTTTTATTGCTGTGAAATGTATTGCTTTAAAGAAGCTTTGTATCAAGAATTGCCCTGTTTCGGATCATGGCATGGAAGCGCTTGCTAGTGGTTGCCCTATTTTGGTTAAAGTGAAAGTGAAAAATGGAGAGGAGTTACTTCAGAAGGGGCAGATGGGTAAGAGCAACTCGAGGACACTTGGTGTTAATTGGAATTCATTTGGATATGGGCGAGATTTAGATGCAGTGCCATGATGGTGGGGCCAAAAAATGGAATGAATTTCCTCAAGGGTGGCCATCAAATGGAGCTTCAGTATGGATCGAGCAGAAGGGGCGATCAAATCATTCAAGTTGTGGGGTTTGGAGGGGGAGGATTTTGGGGGTTTGCAATTAAGGGGGGGGGGGAGTAATTTCGGGAAATTAATCTGGAATTGGACAACAAAAAAAAAAAAAAAAAGGGGAAAAA | |||||||||
gi|109873901|gb|DW502876.1|DW502876 GH_TMIRS_069_H10_F Cotton Normalized Library dT primed Gossypium hirsutum cDNA, mRNA sequenc TTCCACAGCTTTCTTGAACTG EST sequence (targeted fragment marked with yellow): ACGACCCTATGAAATGAAAACTCACCCTTTTTCCCATTTCTTTCTCTCTCTTTTTGTCCTTTTGGATTTTGCAGCCATGGCTGCCTATGAAGCTTTAGGGTTTTCCCTTTCTTTTCCTCTTTTGCAGAAAAAGGTTGGTAGCGATAAGAGGAAAAAGAAAAGAAAGAACAAAAAACATGGCTCTCTTCGTATTCTTCCACAGCTTTCTTGAACTGCAATTTCATGTAATCAGATCATTCATTCATTCATTGTCGTTGATGGTGTTGCATACATACGAGTACGTTGTTGCGGTTCAATAAAGCTGTGGGAAGATACAAACAGGGTCAAAGTCAAGGTCAAAAAGTCAGTGATTTAATAAATTCAATGTTCATTTCTTCTTTACATGATCTGAATATGTTTATCTCTGTATTCTTTTATATACAATTACAGCCTACGCTACAATTTAGAGCATGTTAATCCTAAGACTCGAACTTGGTCTCTGCGCGGGGATATCTCTCATAAGGAGATCCTATTTTTCTAGAGGGGCCCCCCCCGGGGGAGAACCCCCT | |||||||||
gi|164350706|gb|ES847911.1|ES847911 UFL_149_29 Cotton fiber 0-10 day post anthesis Gossypium hirsutum cDNA, mRNA sequence TTCCACAGCTTTCTTGAACTG EST sequence (targeted fragment marked with yellow): AAGAGCAGTTGGGGAAAGCTTTGGAGGGATGTGATGTTGTCATCATTCCAGCCGGGGTGCCTAGAAAGCCCGGTATGACTCGTGATGATCTTTTCAACATTAATGCCGGAATCGTCAAGGGTCTATGTTCTGCAATTGCTAAATATTGCCCCAATGCACTTGTCAATATGATCAGCAACCCTGTCAATTCAACTGTTCCTATCGCAGCTGAGGTTTTCAAGAAGGCAGGGACATATGATGAAAGAAAGTTGTTTGGTGTAACCACCCTTGATGTGGTTCGGGCTAAGACTTTCTATGCTGGGAAGGCTAAAGTAAATGTTGCAGATGTTAATGTCCCTGTTGTTGGTGGTCATGCTGGAATTACCATTCTCCCACTATTTTCTCAAGCCACACCAAAAGCCAATTTACCTGAAGAGGATATCAAGGCTCTCACAAAGAGGACACAAGATGGGGGCACTGAAGTTGTGGAAGCCAAGGCTGGAAAGGGTTCAGCAACATTATCAATGGCCTATGCTGGAGCCATTTTCGCTGATGCTTGCCTTAAGGGACTGAATGGCGTTCCCGACGTAGTGGAGTGCTCATTTGTGCAGTCAACTGTTACTGAACTCCCTTTCTTTGCTTCCAAGGTGAGGCTTGGAAAGAACGGTGTGGAGGAAGTTTTGGGGTTAGGCCCTCTCTCTGAGTACGAGAAAGAAAGGTTGGAGAGCCTCAAACCAGAACTTAAATCATCTATTGAGAAAGGGATCAAGTTCGCCAACCAGAATTAACCTGAAGCTACTTAGGATTTCTTCCATTAGCCCAATCCGAAATCTTTAAAAGTTTTTTTTTTGTGTACTGTTTGAATTTCGGGTGCAAGCAGCCACCGCTTTAATGGAAAAGGAAAGGGCCTTACTTACCCTCAGGTTTTCAAGTAATAATTTCCCAGTGAACTTGTACGAAGGAAGGTTTGGGTTTTAAAAAAAAA | |||||||||
gi|164318332|gb|ES816788.1|ES816788 UFL_240_48 Cotton fiber 0-10 day post anthesis Gossypium hirsutum cDNA, mRNA sequence TTCCACAGCTTTCTTGAACTG EST sequence (targeted fragment marked with yellow): GGCACGAGCCGAGGTGTCTCTTTCACAAAACAGGTGAAAAAAAAGCAAAGAAACAGAATACTACTGTTACTGTTAGTATTAAAGAAAGAAAGAAGCTTTTAAAGTCCAGAGATAGAAATCAAGTCCAAGGAGAACAACGCACTACAGACAAATTCCAATTATATTATTAATAATCAAATACCTATAATATTTATATATAGGAAAACCCCACCCTTACTCAATAAAGCTTCAGACTGGGTTTTCTATGTGAAGTTTAGGATTTTTTTTTCTTTGTGATGGATCCGCCAGCTATGATGAGCGATGGAAGGTACAATCTAGCAGAGATCTGGCAGTATCCCATGAGTGAATCTGGGATAAGTAGGGGTCAGTTCGGACATGGGTTGGCTCAGTTCGGGGACCCCAGTCGAGAGATTTCCGGCAATGATCCGGTTAGCTTGGAGCTGCAGCAGAGAAGGGGTGGTATGAGGCGAAGGCGTGACGGAGAAGATGAAACAGCTAAGGTTGTCTCTACTAGCTCCACTAGTAGTGGCAATGCCGTGAATGATGGGTGCGGGAAGAGAATTAAAGCAGCAGGAGGCAGAGAACAAATCATGAATCTAGAGTTGAAGCAGACCCCAGTCAGGCAAGCTGTGGAAGAAAAGTTCACCCTTCCGAGCACCTAACAAGATTACATCACGTACGAGCACGAGGGGGTCAGCTACTGATAGCCACGCTTACCTGAAAGGCTAAGAGAGAAAGAATAGTGAAAAATGAAGATTCTCAGGATTTGGTCCGGTTGGCATAAGTATGGGCAAGCATTTGTCCTGATGAATAATTATTACTTTCATCACTACGCGTCGGGTCAGTTCTATTAATGAACTTGAAGCAGTAATTTCAGAATAAACCTGGCTATGAATAATTTCTTGAAAAATTAGGGCCAAAAGGGTTGATGCTCTGTATGGCATCCGGTCCCAAGTGAAAAGGATACAGGGGGGGACATCGCCGAAGGGTGGCCATTGGCAGGGTTTCAAAGGGAAAAAAATGGGAAAAGGAAACCCTTGGATTCAAATATGAGATTAAATAAATTTGGGGGGTTTATTTGGGGTGGGCAAAAAAATATTTTTTCCTTTTTACAAAAAGGGGGGGAGCCCCCATTGGAAAAAAAAAGAATTATATTTTTAAGGAAAGGGTTTTTTTTTGTGTTTGTGGGAAGGGGGTGCTCTTTTCTTCAATATTAGTCAAAAAATTAAATAGAGAGGGAGGATACCCTCATAAAAAAATTATTTTTTTTTTTTTTTTTTTGTAAAAAAA | |||||||||
gi|164347644|gb|EV494957.1|EV494957 sg033E08 Cotton Lambda Zap Express Library Gossypium hirsutum cDNA, mRNA sequence TTCCACAGCTTTCTTGAACTG EST sequence (targeted fragment marked with yellow): CAGACTCCCCCAAAACCTCACCACAAAAGAAATCTCTTCTATTTTTCCCCACTCTACTGCAAAAATGTTTCGATCCGTTGCTAGATCGGCCGCCGGTAAGAGCCTCCTCCGACGAGGATATGCAACCGCCGTACCTGAACGGAAAGTCGCTGTCTTGGGCGCAGCTGGAGGGATCGGCCAACCCTTGGCTCTCCTCATGAAGCTTAACCCTCTTGTTTCTCAACTGGCTCTCTATGATATCGCTAACACTCCCGGTGTTGCCGCTGATGTCAGCCACATCAACTCTAGATCTGAGGTTGCCGGAATATGTAGGTGAAGAGCAGTTGGGGAAAGCTTTGGAGGGATGTGATGTTGTCATCATTCCAGCCGGGGTGCCTAGAAAGCCCGGTATGACTCGTGATGATCTTTTCAACATTAATGCCGGAATCGTCCAGGGTCTATGTTCTGCAATTGCTAAATATTGCCCA | |||||||||
gi|164336430|gb|ES801075.1|ES801075 UFL_604_68 Cotton fiber 0-10 day post anthesis Gossypium hirsutum cDNA, mRNA sequence TTCCACAGCTTTCTTGAACTG EST sequence (targeted fragment marked with yellow): GGCACGAGATTTGCAGAGCTTCCTTCTGCTAATGATGAGACCAAAGGACTTGTTATACATCAGCCTAAATACGAGTCTTATTCTGGAAATGCCTTCTCAACACTGATGACTGCCAATTCCGGGTTGTCTCCTTGGTGTGTCTCACCACCCGGAAATCAATGGTTAGTTCCCGTAATGTCTCCTTCGGAAGGACTTGTGTACAAGCCCTACACATGGCCTATACCTCCAACTGCTGGCTTACTTACACCAGTTTATGGAAGCTGTGGTATTGTGAACTTAGGTGTAAGCGGTCGGGACTTTTCGAACACGGCTAAAAATCTTGCAGCTTCTCACCAACACGATATTGAAATTCTTCGAACTGACCCTCCCATAAGTCAGACCAACTTTCCGCATTATGGCATGCCGGTCATGAATCCATCAGTTACTGGCTCAGCACTTGAGCAGATGAGCCGTGTTATTGCTGTCCAGTCTAAGGCCAACTTCACCATGGCTCAACCGAGTTCATGTAACACGTCTAGCCAACTGAGTCAAGCAATCTCGTATTCTACTCAGAAACTACCTGCACCAAATGAGACCGAAATACAAGGGACTACTGGCAGTAGTTCCTCTGAGAGAACTAAAGTGGATGCACTTCCTCTTTTCCCTACTGAACCACCAACAACGGCAGCTAATTGCGATGCTTGGACTCATCAACAACGAACAAAGGTGATTAAGGTTATACCCCATAACCGCGTATCGGCAACTGAATCCGCAGCTCGTATTTTCCAGTCTATACAAGAAGAAAGGAAACAGTATGATTAGTGTTTTCCTTTTTATCTAATGAGAGTGTTCTTGGTTTTGTGTCTGAATATTTGATGTGTAATATTTATATGTTAATTCATGTACATAATATGCAACATAAGGTGGAAAAGAACCAGTTTTTGTACTATTCTATCCAAAAAAAAAAAAAAAAAAAA | |||||||||
gi|109850287|gb|DW479266.1|DW479266 GH_RMIRS_018_G08_R Cotton Normalized Library random primed Gossypium hirsutum cDNA, mRNA seq TTCCACAGCTTTCTTGAACTG EST sequence (targeted fragment marked with yellow): ATCAGGCAGAGGACGAGACAAGAGGGAAATTATTACGGCAAAATTCATAGGTATCAAGCTAGGGTTCTTGGCTGGTTCCAAATTTTACTTAAATTACAGTGCAAACTACATCTTAAAAGATCAGTAAAGCTTGAAAAGGTAACAATAAAGCAAGTATGGAGATGGGTTACGCAGTCAAAATCAAGGGATTTCACTCTTATCAAACCAGAAAATCAATGGCTTCGGCTGCTACTTGTAGAACCCGCAGATGGGGTCGGTTTCTTCAATGAACAAGAAGACTTGAAAGCTTCTATCTGAGATTGACATTTCACGTAATCCCCTTTGTTTTCTTGCAAACACTTCTTTAAAGCCTCAACGTCGCATGGTGATGGGATCTTCTTCGCCCCGTTAATATCTCCGTCCTCGCCCATTTTCTTAAAACCTAATGTTTGGAGGTTAAGAAAACTGTGGAAACACAAGGAGAAGAGACGGCGAAAATT | |||||||||
gi|84173097|gb|DR461745.1|DR461745 CM100F08 Cotton Lambda Zap Express Library Gossypium hirsutum cDNA, mRNA sequence TTCCACAGCTTTCTTGAACTG EST sequence (targeted fragment marked with yellow): CGGACGAGTCAAAAACCTCACCACAAAAGAAATCTCTTCTATTTTTCCCCACTCTACTGCAAAAATGTTTCGATCCGTTGCTAGATCGGCTGCGGTAAGACCTCCTCCGACGAGGATATGAACCGCCGTACCTGAACGGAAAGTCGCTGTCTTGGGCGCAGCTGGAGGGATCGGCCAACCCTTGGCTCTCCTCATGAAGCTTAACCCTCTTGTTTCTCAACTGGCTCTCTATGATATCGCTAACACTCCCGGTGTTGCCGCTGATGTCAGCCACATCAACTCTAGATCTGAGGTTGCCGGATATGTAGGTGAAGAGCAGTTGGGGAAAGCTTTGGAGTGATGTGATTTTGTCATCATTCCAGCCGGGGTGCCTAGAAAGCCCGGTATGACTCGTGATGATCTTTTCACCATTATTGCCGGAATCGTCAAGGGTCTATGTTCTGCAATTGCTAAATATTGCCCCAATGCACTTGTCAATATGATCAGCAACCCTGTCAATTCAATTGTTCCTATCGCAGCTGATGTTTCAAGAAGGCAGGGACATATGATGCAAGAAGTTGTTTGGTGTACACACCTTGATGTGGTTCGGGCTAAGACTTCCTATGCTGGGAAAGGCTAAGTAAATGTTGCAGATTGTTATTGTCCTTGTTGTTGGAGGCCATGCTGGAATTACCATTCTCCCATATTTTCTAAGCCACACCAAAGCCATTTACTTGAAAAGAATCAAGCTCTCACAAAAGGAACAACAGTGGGACTGAATTTTGAAAC | |||||||||
gi|193217669|gb|EY197617.1|EY197617 BC_006_14 Cotton ovule and fiber 3-5 days post anthesis Gossypium hirsutum cDNA, mRNA sequen TTCCACAGCTTTCTTGAACTG EST sequence (targeted fragment marked with yellow): AAACCGGGGACTCGCGCGCCTGCAGGTCGNACACTAGTGGATCCAAAGAATTCGGCACGAGATTCTGTGAGAGTGTTCATTCATGGCTATCAGATGACCCTAAAAACATTGCAGTTGTTCATTGCATGGCAGGAAAAGGTCGAACAGGCTTAATGGTGTGTGCCTACCTTGTTTACACCGGAATGTCAGCTGAGGAAGCACTTCAGTTATATGCCCAAAAGCGGACAACTAACAATGAAGGAGTCTCTATACCAAGCCAACGCCGTTATGTGGGGTATTGGGAAAAATTACTTTCTTTTACCAGAGGCATTGGCAATGGACCTGTCGATGTGCACTTGCCTCAACCATGTAGCCGAGAATTGCGGCGGATACGACTTTACGACACAGTTAATACCAACTCTGTCTTCTTCGTTGTCTCGGAGCTCCAAGAGATTCCGGATCAGATGAACCGCCCGCCTGTTGAAGTTGCCAAGAGATGCTGTCGACAAATCAAAAAAGGAAGTGAAGCGAATTGCAGTCCTCGATATTTCTTGTCATATGTTGAAGGGGACGAAGAAGGGGCTACACCAGAATCGGAAGAACCTCGTGTTGTAGTCCAAATGGACACGGAGAGTCCCATATTATATCAGAAGAACTGTCTTGACTATCGTTTCAATAAACCTGTGGAAGTTAAGGGAGACGTGCGCGTCATATTCTATCAAAAAATGATCGGAGGTCGCCTTTTTTTTGCCTGTTTCAATACAGCCTTCATCAAGAGCAGCTTGCTACAGTTTACGATCCGGGATCTGGACAAAGTTGGGAGTGCCGGCAGATTAATATGCGGCCCTGCATTCTGTGTCGAGTTGCTTTTCGGTCCCAATCGGAGCCTCTCGAGTGCTTTTTCATCTAATTATGATGTAATGAATTTGTACTGAACCCTAAACTCAAAGGACTTGTTTTAAAAAATAATAAAAACAATA | |||||||||