| mature miRNA: CATTTTGGGTATATAGTCATA species: Guizotia abyssinica database: miRNEST The numbers on the right side of the alignments show a score calculated for them. When calculating the score, a mismatch is given a score of 1, bulge: 2, and wobble: 0.5. |
| Predicted miRNA targets | |||||||||
gi|211727898|gb|GE574326.1|GE574326 CCHT7652.b1_H18.ab1 CCHT Niger Seed Guizotia abyssinica cDNA clone CCHT7652, mRNA sequence CATTTTGGGTATATAGTCATA EST sequence (targeted fragment marked with yellow): TTTTTTATTATTGTATATCTAAAATGTGCATTTGCTACTGGAGATACAAAAGCTAATTCATGTACCTTGTTAGACTTTTGTAGGTGTTTTCTTTCAGTTATTTGATCAAACACCCTCTTAATATATAATACATGATGCATAATGGAAGCAAACATACCCAGTAAAACCCCACTTAGAGTAGGGTCTAGAGATTTGGGGCCACATATTGTGGGGTTTTACTATTGGTTGGCTTAATTATGCTCCTGCTTATATAGCTTCTTTTTATTTATTTTTTTGAACAAAGTATACAAGCTTAATTATGTGCAGGAAGGAAAAAAGCAATTGGTTGACTATTAAACAGGCTCTTCAACCAACTTGTGGTTGAGGATACTGATACTACCAGGTATTGTGTTTATAAATATATTGAAGTCAAGATTAATTCTAACATTTTATGATTTAGTTTTTAGAACACCTGGCAAAACAAATCGAACACCCAAGTTTAGGATATTATGGGCAATTATCACGACATAGATCCTGTCCCTTCAGGTTCTATCTTTTAATCTTTGAATCTTAAAAGTCAACCATGAAGTCTAACTTTGAGATAGCTAGGAAACTTAAAAATTCCTTATGATTTATATGCAGATACTGGCATCTTGGTCAGTTTGCTCCATTANNGAGAGAGCAAACAGCAGCATAACTCCAAGGTGATTGGTGTCTATTGGCAAAGCTCTCAGTGGCTTTGGTGCTCTGTGTATGCAAGCAAGCAGTCAGTTGCGTA | |||||||||