| mature miRNA: GGAATGTTGTCTGGCTCGAGA species: Helianthus petiolaris database: miRNEST The numbers on the right side of the alignments show a score calculated for them. When calculating the score, a mismatch is given a score of 1, bulge: 2, and wobble: 0.5. |
| Predicted miRNA targets | |||||||||
gi|90484603|gb|DY946461.1|DY946461 CHPY1768.b1_O10.ab1 CHP(XYZ) plains sunflower Helianthus petiolaris cDNA clone CHPY1768, mRNA GGAATGTTGTCTGGCTCGAGA EST sequence (targeted fragment marked with yellow): CGGGGATTTTGTCTTACTAAACTGGTTAGTTATGTCCCCTCCCTCTGTTAAGTTAAGTGGATCTCTGGAACACCGAACACAGCATTAGGTCTACCAGAGGAGATAGAGGTAAAACCTGCCTCTCTCCTTCAAAACCCTCTCTCAAGACACACACAGCATGCCTTCGAACACCACAAACATTGTCGTTTTTCCGATCAAAACCTTGGTGGCATTCATCACGGGAAAGACAAAGTACATGAGCGGGAGATGATGATTTGTGGTGGTGAGCAACCAGCGACGATATGGGTATAAGAAGAAAGCCCGAGCATAAGAAAGGGTTTTGGACAAAGAGAGGTGCTGGCTCTAGGGTTCCGGCTGCTGGTCCTGGCAACGACCACAACCGACGGTCCCGCGAGCCCAGTGGTGGTAGCAATTTGGGTTGATGTAAAACGGTGGAAGTGTTCGGGTTTTGACAGAGGAGTGACGACTGCCGTTTGAAGGCATGGTATTCCGGCGAGGTGTTTTCCGGTCTAGATCCCGACAATATTCCGACCTCCGACCAAAATCCGGTGAACGACAGTGGTTGTAACGGTGAGTGGCGAAGATGACACAAATATAATCCGACGAGTATCATTGACGAGAAAAAGAGGATTATTTAGCTGATGTGAGATCAACTGGATCTTCATGACCTTATGCTTAGCCGTTATCATCAGATTTAGAGATACCAAACACATGNGTAATGCTTCAGGTTTGACGGTTATAACGATCATGATGATTGAAGCACTGTACTTTTCGGCTTTTCTTCTNCAGTTTCTAGAAGGNGTCCTGAAAGCACTCTCGCTCATTTTCATGCTTGTGATGTACACGTGGCACTATAATACACTTAAAAATGAAATACTTCAAAGAGTACAAATACTA | |||||||||