| mature miRNA: TCGATAAACCTCTGCATCCA species: Helianthus petiolaris database: miRNEST The numbers on the right side of the alignments show a score calculated for them. When calculating the score, a mismatch is given a score of 1, bulge: 2, and wobble: 0.5. |
| Predicted miRNA targets | |||||||||
gi|90474431|gb|DY936289.1|DY936289 CHPX2394.b1_C23.ab1 CHP(XYZ) plains sunflower Helianthus petiolaris cDNA clone CHPX2394, mRNA TCGATAAACCTCTGCATCCA EST sequence (targeted fragment marked with yellow): TCCCTAATTATCTTCGTCTTTCCTCTCCAAACTCAACACTCCATCATCTTCCCCAAATTTCTAGGGTTTAGGCCGCCTGCACCACCAATTCCGGGTTAATGCTTAAACCGNCCGCATCCATCTTCTTCTATCTGCCTTAACAAACCAATCCTCTAAATCCGTCCTATTCGGGAAAGGTCTACCAACCTCCGTTTCATTCACAAAACAAATAATGCTCAAAAAACGCCGCAACAATGGTGGCCTCAGAGTTGTTGCAGAGAAGGTCGTCGGAATCAACCTGAAAACTACTAATTCCGCCGTCGGAGCGATGAAAGGTGGAAAGCCGTTTATTGTGACAAACGCTGAAGGACAGAGGACGACGCCGCCCGTGGTGGCGCACACAAAGACTGGAGACCGGTTGGTTGGACAGATTGCCAAGAGGCAGGCGGTTGTGAATCCGGAGAATACGTTCTTTTCGGTGAAGAGGTTTATTGGAAGGAAGATGTCGGAGGTTGATGAGGAGTCGAAGCAGGTTTCGTATACGGTTGTGAGAGATGAGAATGGGAATGTGAAGCTTGATTGTCCTGCTATTGGGAAGCAGTTTGCTGCTGAAGAAATTTCAGCTCAGGTTTTGAGGAAGCTTGTGGATGATGCTTCTAAGTTTTTGAATGATAAGGTTACTAAAGCTGTTGTGACCGCGCCTGCTTATTTTAATGATTCTCAAAGGACGGCGACAAAGGATGCGGTTCGGATTGCGGGTCTTGAAGTTCTTA | |||||||||