| mature miRNA: TCGGACCAGGCTTCATTCC species: Helianthus petiolaris database: miRNEST The numbers on the right side of the alignments show a score calculated for them. When calculating the score, a mismatch is given a score of 1, bulge: 2, and wobble: 0.5. |
| Predicted miRNA targets | |||||||||
gi|90484522|gb|DY946380.1|DY946380 CHPY1687.b1_N13.ab1 CHP(XYZ) plains sunflower Helianthus petiolaris cDNA clone CHPY1687, mRNA TCGGACCAGGCTTCATTCC EST sequence (targeted fragment marked with yellow): GCGGGGACAAACAGAACCTCTTCTCACTCTCTCTCTAACATCTCTCTCATCCTCTCACTATACTTTCTCTCTCATGTTCATCGTGTCACCATCTCCAAAGAACACACATGTTGCTCCATAAATCCAACAAATCAACATTTTCATGTAAATTCACTAAACCAAGCCCCCTCCCAAACAACTAAATGGGCAGACTAAACCACAAAAAATCCAACTTTAACTTTGTCACAAACACTTGGGTTCTAATAAGAATCACTTCTTGTTTCTCTTGAACAACAACAATAGTAATAGCAACCCTTCATGGAAGTCTCAGAAAATCTTTCTTTTCTCTTCGTCTCTTCCTAACCCTCAAAGCTACCCGACCCATCATGTCCGACCCAAACCCGACTCGACCCGTTTCATCTTTCCTCCCTTCACCAAAATTCTTCAACACCCTATTCTCCCAATCATCACCTACTTCAACCCTCAACAACCCATTTGAAAAAACCCCAAAAGACCCGACCCGAAGCCCGGTTGAAAAACTTGACCCGGAAGGCATAGCTCTAGCACTAATTGAAACCCGACCAGGTCAACCCACGGGTCAACCCAACACAATAAGTAGAATTAGTGTTATTTGCATCAAATTTAAAGATCCAGATTCCTGAATTTTGTGGGGATTATGGGATCAAGACACGTAGTCCACATTTTTCGGGGGGGTCGGTGGGAACCGGGTCCGGGTCGCCCCGGAGTTTTGCTGGGCCTTTGTCTTTGAAGGAGATGGAGAGTTCAGAAGAGTATACACGAGTTGTTTGTCATGGGCCGAACCCGAAAACGACCCATATATTTGATAATTGTGTTGTGGAGAGTTTGTTGTGGTCGCCCGAATTGAAGAAGCCTGGTCCGAAACTGAGTTTTTTGAGCTTTTGTCATACATGCAACAAGAGTC | |||||||||