miRNEST 2.0: an integrative microRNA resource miRNEST 2.0, an integrative microRNA resource :: Browse




mature miRNA: ACCTCCATCGCCATCGCCATC
species: Helianthus tuberosus
database: miRNEST
The numbers on the right side of the alignments show a score calculated for them.
When calculating the score, a mismatch is given a score of 1, bulge: 2, and wobble: 0.5.

Predicted miRNA targets
gi|125460208|gb|EL471901.1|EL471901 CHTM28976.b1_P19.ab1 CHT(LMS) Jerusalem artichoke Helianthus tuberosus cDNA clone CHTM28976, 

ACCTCCATCGCCATCGCCATC
| |||||||||||||||| .|
TAGAGGTAGCGGTAGCGGGGG

EST sequence (targeted fragment marked with yellow):
CCACCAAAACTGAAACGTCGATACTATGGGGGCGATGGCGATGGAGATGGCGATGGCTAGTTTCTCATAGATCACAAAATACAATCTTCAAAGCAAATTGTTCGAAAGATTACGATGGTTAAGTGGCGCCAAAATACTTCAATACTCTTTCGCCGGCCTGTAATTCATCCAAGGGTCATGGAAGATGGGATTCTGTTTGGTCAAGTATTGTATTTGGCAGAATTCATAGTTGGGATGCCAACAGCAGAGTGCTACAATGAAGTTGATCCTCTACCTAAAGTAATGATGATGTTGATTTGTATAATCAACTATGGAATGAATGTGCTGGGCTTGCTGTTATAATTCCTTACATAGGTGACAGGGTTTTCTACTTCCCTCAAGGCTGCCTCGAGCAGATTAAGGCATGCATGGAGGATAGAGATGACCCAACTATACCCACCTATGGTTTACCTTCAAAGATTCTTTGCAAGGTTGTTGATGTTGAGTTAAAGGCGTTCCCCGACACTGATGAGGTGTTTGCTGAGATTGTGTTGCTTCCAGATCCTGAAGAACGTGAGGGATCAACCTCTGGAAGTGTTACTCAAAACATTCCTGCAAATTCTTTTCGGAAGATTCTGACGACTTCTGATACAAGCAAGCATGGGGGATGCAGCTTACCCAAGTTATGTGTTGAGAAAGCATTTCCACCTTTGGATGCGGCTAAAGATCAATCATCCCAACGGTTAGTGGCCAAGGATCTACATGGGGCAAGCTGGTCTTTCCAGCTTGTCCATCGCGGCGAT


gi|125429614|gb|EL441586.1|EL441586 CHTM18333.b1_I24.ab1 CHT(LMS) Jerusalem artichoke Helianthus tuberosus cDNA clone CHTM18333, 

ACCTCCATCGCCATCGCCATC
 || |||||||||||||||.|
AGGCGGTAGCGGTAGCGGTGG

EST sequence (targeted fragment marked with yellow):
TCATCATGGGCAGCTTTCGGTCGTTACGGCCGAATTCCCGGTGTCGAACACATGGGCGTCTATATAAAAATCAAGAACAAACCCAGAAAGAAATACCTTCAAAAACCCTCAAAAATCCAGTCTTTATAGCTCCAGTCGCCAGAATTCACCCTCAAACAATAACCCACAAAAGTTTTCCGGCCAAGTTTCACCGCAATCCGGTGGCGATGGCGATGGCGGAGGTGGTGGTGGTGCTACTCCTAGCTTTTGTGGATTTTCTTTTGGTGAATTAAAAAGTGCTACTAATAATTTTAGTTCTGATTTAATTGTGTCGGAAAGTGGTGAAAAGGCGCCAAATGTTGTGTATAAAGGACGGTTAAAGAATCGCCGGTGGATTGCTGTTAAGAAGTTTTCAAGATTAGCATGGCCTGATGCTAAACAATTTGTGGAAGAAGCATTGGGTGTTGGAAAATTGCGTCACAAGCGACTAGCGAATTTGATCGGGTATTGTTGTGATGGTGAAGAGAGGTTGCTTGTTGCTGAGTACATGCCTAATGACACCCTTGCTAAACATCTGTTTCATTGGGAAAATCAAACTATCGAGTGGGCTATGCGCATACGGGTTGCTCAATACATATCTGAGGCCTTAAACTATTGTTGCTCCGAAGGTCGTGAATTGTACCATGACCTCAATGCGTACAGGATCCTCTTCGATGAGGAGGGAGATCCCCGACTCTCGTGTTTCGG


gi|125436275|gb|EL447972.1|EL447972 CHTM2669.b1_J20.ab1 CHT(LMS) Jerusalem artichoke Helianthus tuberosus cDNA clone CHTM2669, m 

ACCTCCATCGCCATCGCCATC
||| ||||||||| | |||.|
TGGCGGTAGCGGTCGAGGTGG

EST sequence (targeted fragment marked with yellow):
GAGCGATAGAATAGAAAACCCAAGTAACAAATATATTCTCTCTGTCTACTTTCTCTCTCTACAATCTTTCTTCCGATCATGGGTCTTTGTGCATCAGCTCCAAAATCAAGAACAAACCCAGAAAGAAATACCTTCAAAAACCCTCAAAAATCCGGTCTTTATAGCTCCAGTCCCCAGAATTCACCCTCAAACAATAACCCACAAAAGTTTTCCGGCCAAGTTTCACCGCAATCCGGTGGAGCTGGCGATGGCGGTGGCGGTGGAGCTACTCCTAGCTTTTGTGAATTTTCTTTTGGCGAATTAAAAAGTGCTACTAATAATTTTAGTTCTGATTTAATTGTGTCGGACAGTGGTGAAAAGGCGCCAAATGTTGTGTATAAAGGACGGTTAAAGAATCGCCGGTGGATTGCTGTTAAGAAGTTTTCAAGATTAGCATGGCCTGATGCTAAACAATTTGTGGAAGAAGCATTGGGTGTTGGAAAATTGCGTCACAAGCAACTAGCGAATTTGATCGGGTATTGTTGTGATGGTGAAGAGAGGTTGCTTGTTGCTGAGTACATGCCTAATGACACCCTTGCTAAACATCTGTTTCACTGGGACAATCAAACTATCGAGTGGACTATGCGTATACCGGTTGCTCTATACATATCTGAGGCCTTACACTATTGTTGCTCGAAAGGTCGTGAATCGTACCATGACCTCAATGCGTACAGTATCCTCTTCGATGAGGAGGGAGATCTCCGACTCTCGTGATTCGGATTCATG


gi|125438223|gb|EL449920.1|EL449920 CHTM2923.b1_E12.ab1 CHT(LMS) Jerusalem artichoke Helianthus tuberosus cDNA clone CHTM2923, m 

ACCTCCATCGCCATCGCCATC
||| |||||||||||||||.|
TGGCGGTAGCGGTAGCGGTGG

EST sequence (targeted fragment marked with yellow):
CGCGGGGGTCAGTTTCCCGCAATCCGGTGGCGATGGCGATGGCGGTGGTGGTGGTGGTGCTACTCCTAGCTTTTGTGAATTTTCTTTTGGTGAATTAAAAAGTGCTACTAATAATTTTAGTTCTGATTTAATTGTGTCGGAAAGTGGTGAAAAGGCGCCAAATGTTGTGTATAAAGGACGGTTAAAGAATCGCCGGTGGATTGCTGTTAAGAAGTTTTCAAGATTAGTATGGCCTGATGCTAAACAATTTGTGGAAGAAGCATTGGGTGTTGGAAAATTGCGTCACAAGCGACTAGCGAATTTGATCGGGTATTGTTGTGATGGTGAAGAGAGGTTGCTTGTTGCTGAGTACGTGCCTAATGACACCCTTGCTAAACATCTGTTTCACTGGGAAAATCAGACTATCGAGTGGGCTATGCGCATACGGGTTGCTCAATACATATCTGAGGCCTTAAACTATTGTTGCTTCGAAGGTCGTGAATTGTACCATGACCTCAATGCGTACAGGATCCTCTTCGATGAGGAGGGAGATCCCCGACTCTCGTGTTTCGGATTCATGAGAAATAGTAGGGACGGAAAAAGTTATAGCACGAATCTTGCATATACACCTCCAGAATATCTCAAACATGGAAGAGTAACTGCGGAAAGTGTGGTTTATAGCTTTGGTACGGTCCTTTTAGATCTTCTAAGTGGAAAACACATCCCTCCGAGTCATGCTCTTGATTTGATCCGTGGCAAAAATATCATTCTTTTAATGGAGTCACATTTAGAGGGAAACTTTTCGACAGATGAAGCAACAATACTCGTTGATCTTGCCTCTAAATGTTTGCAATACGAACCGAAAGATAGACCTANCATTAAAGACCTTGTTGAGACACTTGCTCCGCTTCAAACCAAATACGATGTTCCCATCTATGTGATGCTCGGGATTTCAAAACAGAGGAAGCTCCGGTACCTCCCACACGTCCACTT


gi|125460266|gb|EL471959.1|EL471959 CHTM29036.b1_G12.ab1 CHT(LMS) Jerusalem artichoke Helianthus tuberosus cDNA clone CHTM29036, 

ACCTCCATCGCCATCGCCATC
|||||||.||||| | ||| |
TGGAGGTGGCGGTTGGGGTTG

EST sequence (targeted fragment marked with yellow):
AGATGGAGAAGTGTCTCATCCATATCCAAGAAATAGATGGTTCAATTATTACCACATAATATATTTGATAGTTGGTTTGGGGTTGTATAAACTCCCGTACATTCAACATCCATATATGATATCTGCAATCTGATGATGATGAGCTCCGTCGCTAGCGGCAGGTGGTGGCGGAGACCAGAGTTTTCGAAGGGGGTTTCGGTTTTGCTACTTGGACAATTCCTCTCATTTATACTTGCACTTCTCACCTTCACCTCATCCTTTTCTGCCAATCTCGGTCTCAATTCACCTGTTACTCTGGGACTTTTTGGCTATCTGGCTTTAACCATGGTCTATGGAAGCATCTTGTTGTACCGACGCCATGAACTCGTTATTCCATGGTATTGGTATGGTATTATAGCATTTTTTGATGTCCAAGGCAACTATCTTTTTAATTCAGCATATTACTTCACATCAATTACAAGTGTGGCGTTATTAGATTGTTGGACTATTGCATGGGTCATACTTTTTACTTGGATTATTTTGGGCACAAAATATTCTTTATGGCAGCTTCTTGGTGCAGCTCTTTGTGGGTTAGGCCTTTGTTTAGTGGTTCTTTCTGATGTTGGGGTTGGCGGTGGAGGTGGTTCGAATCCACTTTTGGGTGATATACTTGTAACTGGAGCGACAATTTTCTATGCACTGAGCAATGTTGGTGAGGAATTTTGTGTTAAGCAAATTGGTCGTCTTGAAGTATTAGCAATGCTTGGTCTTTTTGGAACGCTCTTTAGTGTGATTGAGAATGCC


gi|125442652|gb|EL454348.1|EL454348 CHTM7030.b1_L05.ab1 CHT(LMS) Jerusalem artichoke Helianthus tuberosus cDNA clone CHTM7030, m 

ACCTCCATCGCCATCGCCATC
||| ||||||||| | |||.|
TGGCGGTAGCGGTCGAGGTGG

EST sequence (targeted fragment marked with yellow):
GCGGGGAAGCGATAGAATAGAACAACCCAGAACAAATATATTCTCTCTGTCTACTTTCTCTCTCTACAATCTTTCTTTCCGATCATGGGTCTTTGTGCATCAGCTCCAAAATCAAGAACAAACCCAGAAAGAAATACCTTCAAAAACCCTCAAAAATCCGGTCTTTATAGCTCCAGTCCCCAGAATTCACCCTCAAACAATAACCCACAAAAGTTTTCCGGCCAAGTTTCACCGCAATCCGGTGGAGCTGGCGATGGCGGTGGCGGTGGTGGTGGTGCTACTCCTAGCTTTTGTGAATTTTCTTTTGGTGAATTAAAAAGTGCTACTAATAATTTTAGTTCTGATTTAATTGTGTCGGAAAGTGGTGAAAAGGCGCCAAATGTTGTGTATAAAGGAAGGTTAAAGAATCGCCGGTGGATTGCTGTTAAGAAGTTTTCAAGGTTAGCATGGCCTGATGCTAAACAATTTGTGGAAGAAGCATTGGGTGTTGGAAAATTGCGTCACAAGCGACTAGCGAATTTGATCGGGTATTGTTGTGATGGTGAAGAGAGGTTGCTTGTTGCTGAGTACATGCCTAATGACACCCTTGCTAAACATCTGTTTCACTGGGAAAATCAAACTATCGAGTGGGCTATGCGTATACGGGTTGCTCAATACATATCTGAGGCCTTAAACTATTGTTGCTCCGAAGGTCGTGAATTGTACCATGACCTCAATGCGTACAGGATCCTCTTCGATGAGGAGGGAGATCCCCGACTCTCGTNGTTCGGATTCATGAGAAATAGTAGGGACGAAAAAAGTATAGCACGAATCTTGCATATACACCTCCAGAATATCTCAAACATGGAAGAGTAACTGCGGAAAGTGTGGTTTATAGCTTGGGGACGGTCCTTTTAGATCTTCTAAGTGAAAAACACATCCCTCCCAGTC


gi|125453333|gb|EL465028.1|EL465028 CHTS397.b1_I03.ab1 CHT(LMS) Jerusalem artichoke Helianthus tuberosus cDNA clone CHTS397, mRN 

ACCTCCATCGCCATCGCCATC
|||||||.|||||. ||||.
TGGAGGTGGCGGTGACGGTGC

EST sequence (targeted fragment marked with yellow):
TTCGCGGGGATCCCACTCACTCCTTATCATCATCCTTCCGATCTGTATCAAGATCTGTTTCAAATCACTCAATCAGTCACCTAGGGTTTGCAATTTCTCCATTTCAAACAACTATGAAGGTCCATCCAGCTCCACACAAGCGTAACATCACCGTCCGGTACGATTTATCCGCTCAATCCACCGCCACCGCCTCAATCTGCCGCCAAAAGAAGCTCCGGCGACTGCCGCACATCTTCGGTAAAGTCCTCGAGCTTCCGTTTTACTCCGACGCTGACGTCACGGTTCAGGAAACGTCAGATTCGTTTAGATTTGTTGTTGATACGGAGGATGATATCGGAACGGATATTGCTGCTCATACGATTGAGATCTGTCCTGGTGTCACGAGAGTTGTTGTGAGAACGATACGTGGCAGTGGCGGTGGAGGTGGCGGCGGTGGTGGTGAGGTTAGTGAGATGAAGCTGGATTTGTGGCGGTTTAGATTGCCGGAGGAAACGGTGCCGGAGCTTGCTACGGCGGAGTTTAGTGACGGAGAGCTGGTGGTGACGGTGCCGAAGGATGTTGAATTGGAGAGGAGTGAAGAGGTTTGGAGTGAAGGTAATGGAACTGGACGGTTTGTTTTGGTACAGTGATATGATATTATGATTTATGAGTTATGAATAGGTTTTGTTGTTTGAATTTGGTTAGGTTTGTTAAGTTTAATTGGATGTTGTTGAAGTAAGACGGTTATCGGCTTCAATGAGTATGTTGCAAATGTTTTTAATGTCGAAA


gi|125453354|gb|EL465049.1|EL465049 CHTS3989.b1_J13.ab1 CHT(LMS) Jerusalem artichoke Helianthus tuberosus cDNA clone CHTS3989, m 

ACCTCCATCGCCATCGCCATC
|||||||.|||||| .| |.|
TGGAGGTGGCGGTATTGATGG

EST sequence (targeted fragment marked with yellow):
CGCGGGGGCGGCCGATCTGTCCAAATTCAAAGAAACATGAGTCGCTCCAGCAGAACGCTGTATGTTGGTAATCTTCCTGGTGATATTCGTGAGCGGGAAGTGGAAGATTTGTTTTACAAGTATGGTCCAATCGCTCGCATTGATCTGAAAGTCCCACCACGACCCCCTGGTTACGCTTTTGTTGAGTTTGAAGAGGCTCGTGATGCTGAGGATGCTATCCGGGGTCGTGATGGCTATGATTTTGATGGGCATAGATTAAGGGTGGAACTTGCTCATGGTGGCCGTGGCAACTCATCTTCTACTGACCGTCATGGTAGTTATGGCGGTGGAGGTGGTGGTGGTCGTGGTGCTTATGGAGTTTCTAAAAGATCCGATTACCGAGTTTTGGTCACTGGGTTACCCTCTTCTGCTTCATGGCAAGACCTTAAGGATCACATGCGTCGAGCTGGAGATGTTTGCTTTTCGCAAGTTTTCAAGGAAGGCGGCGGTACCACAGGGATTGTGGACTATACAAACTATGACGACATGAAATATGCTATACGGAAATTAGATGACTCTGAGTTCCGGAATGCATTCTCTCGTGGATTTATACGCGTGAAGGAGTATGATTCAAGTCGCTCTAGGAGCCGCAGTCGTAGCCGCAGCTATAGCCGTAGTCGCAGCAGGAGCCGGAGCAAGTCCCCAAAAGCAAAATCTTCTCGTCGCTCAAAATCTCGTTCAAGGTCTGCATCTCGTTCTCGTTCAGGATCAGAGCCTCGTCCATCAGCAAGATCTCCTTCAAGATCCAGATCTCCACCACCGTCTCGCCCAAAGCGTGTCAGTAAAAGCCCCAAAAAGCGCAGTCCTAGCAAGAGCCGGAGCCCAAGCAAAAGCAGGAGCCGTAGCAGGAGCAAGAGTTTATCGCGGTGATGGGCGGTTAGACTATGAAGCAGGAAAAGTTACTTTGTTGTTTTGTCTTAACCA


gi|125454111|gb|EL465804.1|EL465804 CHTS4681.b1_A19.ab1 CHT(LMS) Jerusalem artichoke Helianthus tuberosus cDNA clone CHTS4681, m 

ACCTCCATCGCCATCGCCATC
||| |||||||||. .|||.|
TGGTGGTAGCGGTGATGGTGG

EST sequence (targeted fragment marked with yellow):
GCGGGGAGGGGAAAGGAGGGGCTTGTAGTGGATAGAAGGTGAAGCCATTTTGAGATCATAAAGGAAGGAAACATGGGTGCTATGAAGCTGATGTTGTTTCTTTTGGTTCTTTTGAATTTCATTTCTCCTCTATCATTTGCTCATGTTGCCAACAACTACTCAGGTAGGGAAGACGATGGAGTTGTAAACCAAAGCAAATTTGCACACGCCAGTGCACGAGGTGGTAGTGGCGATGGTGGTGCTGGGCGCTCAACTCGAGAAAACAACAACGGATACGGTGGTGACTCTAGCCCCTCCCGACAAGGAGGCGGCGGAGCGGTCATACCTGTGTATGCCGCTTCAGGAGCCGCTGCTAAGCGCAACAATCGCCACAACGCAGCCAACACTTGTAGCATATGTTGGGAACATAGACTTCTGATTGTTATGTCTAGTGTCTTAACGTCATTTCTACTACATATGCGTATTTAAAATTCACTTTAATTTGATGTTGTGCACCTGTTCACGTCGATACGAACTATGTAATATTTGTTTGTTGATAAAGGCGTCCTTTTTACTCAAAAAA


gi|125458756|gb|EL470449.1|EL470449 CHTS9081.b3_A16.ab1 CHT(LMS) Jerusalem artichoke Helianthus tuberosus cDNA clone CHTS9081, m 

ACCTCCATCGCCATCGCCATC
|||||||.||| |.|.|||.|
TGGAGGTGGCGATGGTGGTGG

EST sequence (targeted fragment marked with yellow):
CGGGGGCCAATACACTACAATTTGTACATTTTCAAGAGCAGAAGAGCTTTCAATTTGTGCAATTTCACTGAATCTACACTTCTCACTCCTGCAAGCCCAACATTCACTTGGCACCCATCAAGGCTTGGCTCCTTCTACTTCGCCTTCAAAAACGAGTCCACAAAATCTTGTGACACCGGTGAGAAGCTTGCAATTCAAGTTTCCTCCTCACCGACACCGGAAACATCCGCCTCGCCACCACTACCACAACCGTCGGTTGCAACACCGTCACCTTCCATCGCCATTGGTGGTCACGGGAACATTGTATCCTCCTCACCACCACTACCTAGCATCCCCGGTGGTGGTAGCGGTGGAGGTACAGTTTCATCGTCCCCGTCTTACCCGTGGCCTAATCGTCCGCTAGAACTAGTTTCCCCGAGCCCGTCTCCAATGAATGCGATTTTTCCCTCGAATGGTCCCTTAAGTGGTCCAAGAAAACGTGGCGGATCTTTACCGTTCATCAACAGCAACCCTGCGGTGCCGTTGCCGACCGGTGAAGTCGATTCCGCCACCATAAGGCCTGCTCCTAGTTCTAGTGTTCATAGCTTACAGGATGTGGGGCTTGTTGGTGGTGTTAAAGTATTTTGTTGTGTGGTTTTGCTAGTGGTGTTGATATGAAGATGGGTGGCAGCTAATTGATGTATGTAAAGAGAGGAGTGGGGTAGTGTAGGGTAGGGTAGTGTGGGGGCATGTCAAATTTAAGTTAAAAGGTGGATTTTGATGATTATTGTACCAATCTTTCAATTTTATGAGTTGTGTGACCCTGCATTTGAATTAAG


gi|125443371|gb|EL455067.1|EL455067 CHTM7708.b1_G07.ab1 CHT(LMS) Jerusalem artichoke Helianthus tuberosus cDNA clone CHTM7708, m 

ACCTCCATCGCCATCGCCATC
||| |||||||||||||||.|
TGGCGGTAGCGGTAGCGGTGG

EST sequence (targeted fragment marked with yellow):
GGCGGGGGCGATGAATTAGAACACCCATGAACAATATATTCTCTCTGTCTACTTTCTCTCTCTACAATCTTTCTTCCGATCATGGGTCTTTGTGCATCAGCTCCAAAATCAAGAACAAACCCAGAAAGAAATACCTTCAAAAACCCTCAAAAATCCAGTCTTTATAGCTCCAGTCGCCAGAATTCACCCTCAAACAATAACCCACAAAAGTTTTCCGGCCAAGTTTCACCGCAATCCGGTGGCGATGGCGATGGCGGTGGTGGTGGTGGTGCTACTCCTAGCTTTTGTGAATTTTCTTTTGGTGAATTAAAAAGTGCTACTAATAATTTTAGTTCTGATTTAATTGTGTCGGAAAGTGGTGAAAAGGCGCCAAATGTTGTGTATAAAGGACGGTTAAAGAATCGCCGGTGGATTGCTGTTAAGAAGTTTTCAAGATTAGCATGGCCTGATGCTAAACAATTTGTGGAAGAAGCATTGGGTGTTGGAAAATTGCGTCACAAGCGACTAGCGAATTTGATCGGGTATTGTTGTGATGGTGAAGAGAGGTTGCTTGTTGCTGAGTACATGCCTAATGACACCCTTGCTAAACATCTGTTTCACTGGGAAAATCAAACTATCGAGTGGGCTATGCGCATACGGGTTGCTCAATACATATCTGAGGCCTTAAACTATTGTTGCTCCGAAGGTCGTGAATTGTACCATGACCTCAATGCGTACAGGATCCTCTTCGATGAGGAGGGAGATCCCCGACTCTCGTGTTTCGGATTCATGAGAAATAGTAGGGACGGAAAAAAGTATAGCACGAATCTTGCATATACACCTCCAGAATATCTCAAACATGGAAGAGTAAACTGCGGAAGTGTGGTTTATAGCTTTGGTACGGTCCTTTTAGATCT


gi|125444605|gb|EL456301.1|EL456301 CHTM9358.b1_L11.ab1 CHT(LMS) Jerusalem artichoke Helianthus tuberosus cDNA clone CHTM9358, m 

ACCTCCATCGCCATCGCCATC
||| ||||||||| | |||.|
TGGCGGTAGCGGTCGAGGTGG

EST sequence (targeted fragment marked with yellow):
GAATAGAACACCCAAGAACAAATATATTCTCTCTGTCTACTTTCTCTCTCTACAATCTTTCTTTCCGATCATGGGTCTTTGTGCATCAGCTCCAAAATCAAGAACAAACCCAGAAAGAAATACCTTCAAAAACCCTCAAAAATCCGGTCTTTATAGCTCCAGTCCCCAGAATTCACCCTCAAACAATAACCCACAAAAGTTTTCCGGCCAAGTTTCACCGCAATCCGGTGGAGCTGGCGATGGCGGTGGCGGTGGTGCTACTCCTAGCTTTTGTGAATTTTCTTTTGGTGAATTAAAAAGTGCTACTAATAATTTTAGTTCTGATTTAATTGTGTCGGAAAGTGGTGAAAAGGCGCCAAATGTTGTGTATAAAGGACGGTTAAAGAATCGCCGGTGGATTGCTGTTAAGAAGTTTTCAAGATTAGCATGGCCTGATGCTAAACAATTTGTGGAAGAAGCATTGGGTGTTGGAAAATTGCGTCACAAGCGACTAGCGAATTTGATCGGGTATTGTTGTGATGGTGAAGAGAGGTTGCTTGTTGCTGAGTACATGCCTAATGACACCCTTGCTAAACATCTGTTTCACTGGGAAAATCAAACTATCGAGTGGGCTATGCGTATACGGGTTGCTCAATACATATCTGAGGCCTTAAACTATTGTTGCTCCGAAGGTCGTGAATTGTACCATGACCTCAATGCGTACAGGATCCTCTTCGATGAGGAGGGAGATCCCCGACTCTCGTGTTTCGGATTCATGAGAAATAGTANGGACGGAAAAAGTTATAGCACGAATCTTGCATATACACCTCCAGAATATCTCAAACATGGAAGAGTAAACTGCGGAAAGTGTGGTTTATAGCTTCTGGGACGGTCCTTTTAGATCTTCTAAGTGGAAAACACATCCCTCCGAGTCATGCGCTTG


gi|125439822|gb|EL451519.1|EL451519 CHTM4398.b1_L19.ab1 CHT(LMS) Jerusalem artichoke Helianthus tuberosus cDNA clone CHTM4398, m 

ACCTCCATCGCCATCGCCATC
|||||||.|||  .|||||.|
TGGAGGTGGCGTAGGCGGTGG

EST sequence (targeted fragment marked with yellow):
TGCTTCGGCGGGGACACTATGGGGTTTGATTGAACACTCATCTCCCTCTCATCAAACCCTATCACTCTGTTCACACAACCACAACCACCACAGAACCCCATACCACTCGTCAATCAAACCCTAACTCTACGCCGGTTCTCACATTCGTCCAGTTCGCCTCCGATTGCACCGCCGTTTCGTGAATTATTCGGTTTTAGTCCAAACGCTGTAATCAATAAATGTATTTCGTCGGTTTTGTCGTCGTCGTCTCTGTCGGTGGCGGATGCGGTGGAGGTGGATAAGAAAGGTGAGGAGTCCGGTGATGAGGTGGTTGATGAGGATGTGAAGCCGTCTATTCCTGTTAGGGCTTATTTCTTCTCTACTAGTTGCCGAGCATAGGATCAGTCCGCAGTTTATTACGTTTACAAATGTAACGATGGAGTCGGATAAGTTTATATGTGTTCGTGAAATGTCTCCTCAGAATAGCGTTGTGATCATTGACATGAACATGCCAATGCAGCCGCTAAGGAGGCCGATTACGGCTGACTCGGCTCTTATGAATCCGATTTCGAAGATTCTGGCTTTGAAAGGCTCTTGCCAACTGATTGTGTTGGCCCCCATTGAATTATTTTCACATACTAGGAAGCTAGGGGTATCACCATGACATGTGCACTGGCTTGCTTACAGGCATGAACAAAGCAACTCATTGAAAATTTTTGGGACAACTCAAGATCACCTGCAGATATTTAATATTGAGATGAAAGCAAAAATGAAGTCACATCAGATGCCTGAGCAGGTGGTATGATGTCATTGTTGGTGAAATCCAAGACCGAAGATTCAGTAAAATGTGAAGTTGTAGATGGCGGAGAGCTTAAATCGAGACGCCACTTGAATGTTGAGAGGAAAAGTGCAACTTTTGTCATCATCACTGGATTGGGATGATTTC


gi|125437851|gb|EL449548.1|EL449548 CHTM2815.b1_N07.ab1 CHT(LMS) Jerusalem artichoke Helianthus tuberosus cDNA clone CHTM2815, m 

ACCTCCATCGCCATCGCCATC
|||||||.|||  .|||||||
TGGAGGTGGCGTAGGCGGTAG

EST sequence (targeted fragment marked with yellow):
GCTTCGGCGGGACACAGAATAGAACAACCTAAACCCCACGACGGATACACACGGCGGCGCAATGCTCCGGTCAAGGTCATAATGTGTCGATACCGACGGTTATTCAGCCACCACACAAACGCCACCATGCTCCTCATCCCGTCACCGTCGTCTCAAACCCTAATTCTCCGATCATTCCGAACACTCATCTCCCTCTCATCAAACCCTATCTCTCTGTTCACACCACCACAGAACCCCATACCACTCTTCAATCAAACCCTAACTCTACGCCGGTTCTCACATTCGTCCAATTCGCCTCCGATTGCACCGCCGGTTCGTGAATTCTTCGGTTTTAGTCCGAACGCTGTAATCAGTAAATGTATTTCGTCGGTTTCGTCGTCGTCGTCTCCGTCGGTGGCGATGGCGGATGCGGTGGAGGTGGATGAGAAAGGTGAGGAGTCCGGTGATGAGGTGGTTGATGAGGATGTGAAGCCGTCTATTCCTGTTAGGGCTTATTTCTTCTCTACTAGTGTGAATTTGAAGGAGTTAATGGACCAAAACAGACCTAATTACATCCAGCCTACTTCCAGGATGACTAATTATGTTGTACTGAGGTTTGGCAACACCAAGCCTGAGTCTATTGGTTTGGGTGCAAGTTTAAGTGGGAGTGACAGTGTCTATATGGTAGTTTTTCAGTATGGTTCAGTTGTCTTGTTTAACGTTCGTGAACATGAAAGTGAGCGGTATCTTAAAATTGTAAAAGAACATGCTTCAGGAGAGCTATCCGAACAGGAAATGAGAAAGGATGAGTATGAAGTAAAGGAGAAACCAACGTTGGAGACATGGATGGAAGGTGGATTAGATTATATAATGCTTCAATATTTGAATATTGATGGGATTCGTACAATTGGCAGTGTTCTGGGCCAGAGTGTAGCTCTTGATTACTATGTTCGTCAGGTTGATGGGATGGTCGGGGAATTTACAGACATCCATCCTGGCATGGAAAAAACTGGAACCTTCACCATGAAAAGAAAAAAATTATTTCC


gi|125455134|gb|EL466827.1|EL466827 CHTS5620.b2_G14.ab1 CHT(LMS) Jerusalem artichoke Helianthus tuberosus cDNA clone CHTS5620, m 

ACCTCCATCGCCATCGCCATC
|| ||||||||| ||.|| ||
TGTAGGTAGCGGCAGTGGCAG

EST sequence (targeted fragment marked with yellow):
TGGCGGGGATCACAAATAATCAATACTTTGTCAATCGAAATCTTACTGCAACAATGTCTGGTCGCGGAAAGGGAGGAAAGGGGCTGGGTAAGGGAGGAGCAAAGCGTCACCGGAAAGTTCTCCGGGATAACATTCAGGGTATCACCAAACCGGCCATCAGGAGGCTCGCTAGAAGAGGTGGAGTCAAGAGAATCAGCGGTCTGATATATGAAGAGACACGTGGCGTTCTGAAGATATTTTTGGAGAATGTAATTCGTGACGCCGTTACCTACACGGAGCACGCTCGCCGGAAGACGGTGACGGCGATGGATGTCGTCTATGCTTTGAAGAGGCAAGGAAGAACTTTGTACGGTTTCGGAGGTTAATAATTTGATTGTGGTCAAGTATGTGATGATAATGATATGGAATGTGTAATTGTTGAAGTTAATCTGATGTTAATGGAATCAATGCTTAAGTTTTATTATCGAAGTTCAGAGAC