miRNEST 2.0: an integrative microRNA resource miRNEST 2.0, an integrative microRNA resource :: Browse




mature miRNA: TATTTGAATCTTTGATTTGTT
species: Helianthus tuberosus
database: miRNEST
The numbers on the right side of the alignments show a score calculated for them.
When calculating the score, a mismatch is given a score of 1, bulge: 2, and wobble: 0.5.

Predicted miRNA targets
gi|125447044|gb|EL458740.1|EL458740 CHTS12153.b1_A16.ab1 CHT(LMS) Jerusalem artichoke Helianthus tuberosus cDNA clone CHTS12153, 

TATTTGAATCTTTGATTTGTT
 |||||| |||||||||| |.
CTAAACTAAGAAACTAAAGAG

EST sequence (targeted fragment marked with yellow):
ACGGCGTTGTTTCAGAAGTAAAGGGTATATTTAGAAACCCTTCAGTAGTAAGAGAAATCAAAGAATCAAATCTCTCCCTCCTAACTTATGGAAAACTAAATAATGTCCCTGAAGCTGTTCATGTTCAGTATCTTATGGGTGTAGAGGGTGTGATTGTGGATTTAGTAGAAGAAATTACAAGTGCTGTTGCAGGTTTAAAACCAGGATTGGAAGAAGGAGGATTGCAGGGAAAAGAGAAGACAGGTAAGATTGAATTGTCATTTTTGCTGAATTTGATTTCACAAGTGATTCAGCATTGATTGTTTGTACATTGGGTTCGGGTCGAGTCGGGTCGTGGTAGTCCATTTGTTAATAATTTATTGTATACTGTGGTGGGAATTGAGTTTGATTAGGGTTAATGAGTGATGGAGTTCCTCTTGGATCTCTAACTTTAGCAGGAAAAGGTTGATTGATCATCATGATTCATGATCATTGATTGATACAGATTGTGTTGTACAACCAGCTTTTGCCCTTATAAAGGAATTAAAAGTTACCTAAAATTGAATTTCATGTTGATTATAGATTCGC


gi|125450660|gb|EL462356.1|EL462356 CHTS16873.b1_B20.ab1 CHT(LMS) Jerusalem artichoke Helianthus tuberosus cDNA clone CHTS16873, 

TATTTGAATCTTTGATTTGTT
 |.||||||||.|||||| ||
CTGAACTTAGAGACTAAAGAA

EST sequence (targeted fragment marked with yellow):
AAACACTAGCAGCTGAAGAAATAATACTCTTCCATATACGAAGAAATCAGAGATTCAAGTCAAACCTCCATCAATCCGGTTTGGTTCCTTTTTCACTCTTCAAATCACACCCATCAAACAAACAAGACCCGCCATGGGTTGCTCCTCCTCGCCTTCGCAATAGGAGTGCGAGGCGGGAAGGCGGACTTAACTCCGGAGAGCGGTGATTCTGATGGCAATAATCAACGTGTTAAGCTGGTGCTATTAGGAGACTCAGGTGTTGGAAAAAGCTGCAATGGTCATCGCTTCCACCGTGGTCAGTTTGAACCAACATCCAGGGTGACAGTTGGAGCATCATTCCTGCCACACAGAATAGGTCCACGGGACTCAACGACCATAAAATTTGAAATATGGGACACAGCTGGCCACGAAAGATAGGCAACACTGGCCCCACTTTATTACCGAGGAGCATGTGTTGCGGTTGTAGTATATGATATAACTAATCCCCACTCAATCCAGAAAGCTCAATAATGGGGCAAGGAATTACAAGAGCAGGGAAGCCCAGATATTGTCTTGGAATTCGGTGGTGACGAGGCTGATCTTCAACATGAACGGGAGGTGTCAGTTACGAATGGAACTGACTATGCGAGAAAAGAACGGGATGATCTTCATGTGAACTTCTGCATAAACAGCTGAGACTTCAAGAAGCGATTTGAATGAATTGCAAAAAGGTTACCAGGACCGTCATCGACATGATGACTTCAGAAGATCAGCTGGAAGCTGATAAAGCCGGTAGCAGTGTAGCCCTG


gi|125442607|gb|EL454303.1|EL454303 CHTM6989.b1_I19.ab1 CHT(LMS) Jerusalem artichoke Helianthus tuberosus cDNA clone CHTM6989, m 

TATTTGAATCTTTGATTTGTT
|||||||||||| |||||. .
ATAAACTTAGAACCTAAATTG

EST sequence (targeted fragment marked with yellow):
GCTTCGGCGGGGATACAAAATTATATTTTTTGCGTTGGAAAGGAAACCTACTTTATGTCGAACTGTGATGTTAGATGTTATAATCTTGCGATATGAAACTTTGCAAAATGTAGGAAGGATGGTGTGGTGATCACAAGAGAACATTGCCAGAGGTTAAATCCAAGATTCAAATACGGAAACAAGACGTCTTTAAACTTGATCGAGTGTTTGTACTTGCAAGACATTCTCCCTGGAATTCTCAGCCAGCTAGGTATGTTTAAACGCCTTTATATTTCTCTAGATATAGCAATCTTGACCTGTTTACTTTCGAAGTGTTGATTAGGGCTATGTTTCATCTCTAATGGGTCAAAATGGGTTAAGTAAAAAAGATAACTAAATGTAAATCAATCATATTGGTCGAATGGGTCGTAAAAGGTCATATTTTCAATAAATTTGGACAAAAAAAAGTCATAGATCAACCCAACCATCTGATGCAAAAATCATCTACATAAATAAGAAACCATGATGGCTCTTCAAGTAAGCATTTAAATAATTCGTTTTTCCTCAACTTTATTTTTGTTTATATAGAAGAGAAATGAGAGGTTTTTTTTACAAAGCGACTGGTTGAAAATGTTTTAGGAGCTCCTTCAGTCCTTCTAATTGTCTACACCTTCAACTGTTGTTGAAGCATGCTAAAAGTATGGGGCATTTTCAAGAGGCTCGTGGTTTGTTTATTTGTATAGAAGCCAAGTAAGTTGGCGATTTTAATAAGATTGCTTGTGAAAGAGTCGATTTGGTTTAATTTACTACTTAATGATGGTTGCTGATCATGACCGTGGGTTGCATCAAGTAGAGAAGGAGCCCTCTGTGTTTGGGATTAGTTATTTAAACTCTTGATTGATAGCTTGTTGATAGCTAAATAATTATTAAAGCTCAAGTTTTTAAATAACATA


gi|125450536|gb|EL462232.1|EL462232 CHTS16759.b1_M14.ab1 CHT(LMS) Jerusalem artichoke Helianthus tuberosus cDNA clone CHTS16759, 

TATTTGAATCTTTGATTTGTT
 ||..||||||||||| ||.|
TTAGGCTTAGAAACTATACGA

EST sequence (targeted fragment marked with yellow):
GGTTAACTGGTGGTGATGGTCTGATGGTAGTTGACGGCGACCGTGACCGCTGTGGATTCTAGGGTTCCGGGGGAAGAAAGAGAGAAAGGGAAAGCTGACGGGGTTGCGGTGGCGCCATGGCTGCCCTACGGCGCATCACCTCCTCCTCTGTTTCTTTACCTTTTAGCTTACAAGAACCACGCTACAGACCCCATCTCTCACACAGCTCTCTCTTCTTTTGCTCGGTGTTCTACGGTTTCCAATAGAATTGATACAGTGAGGAGAGGAAAAAGACGGATGAGGGCTTCAATCCAACGGTTAGTAAATCTCGCTGGCCAAATTTGCAGGTATGGCGTCTCTGTTACGCTGAACCGATATGGATTTTCCGGTGACGCTGACTACATTTTGACGAATAAGTGTTTTAGCATATCAAAGATTCGGATTTTGTACTTTAGTACTTGTGTTGCTACACGTCTAGAGACGGAAACGTTTGCCGTTTGGCATCCAAAGCCGTCGAAGCTAGACACGGTGTTTAGAGGCTGTGATGGTGTAAAAATTTGCGTTTTCGTTGTTTAGGCATGCAAGTATTACAACTTGCAGCCACAATGGATATACCCAATTCTGAGCCTAAACGATTACGGTAGTGAGAAACTGTTTTTCGCTCGATGTAATTATGTATTAAACAAGTGGATGATGCTTCTATGTTGTTTCAAAAGATATGGCGAAAGGGGTATGAACCAAAGCAGAGGATGTGTGAAACTATGGTGCATAGATCATATAGAAATGGTTGGAAAAACGGTTCTCAAATTTGGATCGAGGC


gi|125441845|gb|EL453542.1|EL453542 CHTM628.b1_G14.ab1 CHT(LMS) Jerusalem artichoke Helianthus tuberosus cDNA clone CHTM628, mRN 

TATTTGAATCTTTGATTTGTT
||||||| |||||||.| | |
ATAAACTGAGAAACTGATCTA

EST sequence (targeted fragment marked with yellow):
CGGGGGGACTAAAGGGAACTGGTGGTGATGAAACATTTGGACAATGAAGATGATAATGCGCTTCAAAGGCGGATTAAAAAGATGAATGATGAGCTGGAAGCAAAGATGAAGGAACTGGAGGTTATGAATCGAACTCTTGCGGTTAAGGAATCGCAAATTAACCATGAGTTGGAAGAAGCCCGTTTAGAGTTGATTAAGTTGCAGGTGTCGACTGATATGATTCTTGATGACACAATCAATACGAGTGACATGCATAACAAGTTTCTGCGTGTGGTGCAGAGAAAAGCTCGTGCACGCCTCTTATGGATTGCTGTAGAGCAAAAGAGAAAGCTAGATGCCAAACTGAAACTAGAGATGGAAATTGATGGGTTAAAAGAGAAACTGCAGGTCATGAAACTTTCGGGAGATGAAGATGATACCGCACTTNCAGGCCAGATTAAAAATATGAATGATGAGCTGGAAGCAAAGATGAAGGAAATGGAAGTCATGAATCAAACTCGTGCTTCACGTTTTATAGGATAGCTGAGTTGGCAGTTATACGTGTGGGCAATCATGAAGTGGACAAAACCAATCTAGTCAAAGAGTCAAATACCAGGGCTGCTAT


gi|125445980|gb|EL457676.1|EL457676 CHTS11147.b1_E03.ab1 CHT(LMS) Jerusalem artichoke Helianthus tuberosus cDNA clone CHTS11147, 

TATTTGAATCTTTGATTTGTT
|||||| ||||||||.|  ||
ATAAACCTAGAAACTGACGAA

EST sequence (targeted fragment marked with yellow):
AATGTTTCCGATAACCGCACGCCGTTGAATCTGAACGGATTTCGGACGAAGTTGTTCCGGTCATTAATGATCAGACGTATGAAGATGCGTTAAATGATGAGGAACTTAAGCAGAAAATTTTGACACAAATGAATGAAGCAAAAGTTGAAGGAAATAAGTTATTTGGAGATGGATTGTATGAAGAGGCATTATTGAAGTATGATTATGCTATCCAACTTGCACCTGAGATGCCATCTTCTTCAGAAATTAGGTCCATATGTCATAATAATCGTGCTACTTGTTTCTTCAAGCTGGGCAAGTATGAGGACACGGTGAAAGAATGTACGAAAGCATTGGAACTAAATCCTTCATACATGAAAGCTTTAATCAGAAGAGGAGAAGCCCATGAAAAACTCGAAAACTATGATGAGGCTATTACTGATATGAAGAAAATCTTAGAACTGGATCCTTCAAATCACCAATCTAAGAGAGCCATTTTCCGTTTAGAACCATTGGCCATAGAAAAGCGCGAAAAAATGAAGGAAGAGATGATCGGGAAGTTGAAAGATATGGGGAACTCAATTCTGGGACGATTTGGGATGAGTGTCGACAACTTTAAAGCAGTCAAAGATCCAAATACTGGCTCGTATTCTCTTTCATTTCAGCGCTAAAGATAAATGGAGCTCACGTGTTTATAATATATAAGATAATATATGACACTAAAACGTGGATACAACTGCATCCGTACTCATCTTGTTGGTTGGATTTTGCACTTAGTAGCAGCAGGGCATGCTCAG


gi|125454741|gb|EL466434.1|EL466434 CHTS5261.b2_I20.ab1 CHT(LMS) Jerusalem artichoke Helianthus tuberosus cDNA clone CHTS5261, m 

TATTTGAATCTTTGATTTGTT
.||||||| |||  |||||||
GTAAACTTCGAATATAAACAA

EST sequence (targeted fragment marked with yellow):
AGTTGTGAGTAAACAGCAGACGTGAAACGGTTATCTGTGACACCGGACGGCGGTGGGAAAAAATGGCTTACCCGCAGTCTGCTATTGCCACCGGAAAATCACTGTTATTGCTCGCTCCATCTCATTCTCCTCCAATTTCCAGAACAAATATAAGCTTCAAATGTTCTTCAATTCAGTCACCATTATCAATTTCAACCAAGGATGTAGGAGCTAAACATGTGCTTGCTGCTGGCCTTGCTGCTGGCCTTGCTGCTTGCTTCATGCTTCTGTCCCCATCAAATCAGGTTTTGGCAATTGAACTGTCACATAATAGTTTGTGCCAAATTGCAAGTGCCTCTAACAATATTCCAACTCTTAATCTTGACGAGCCTTCAAATTTGATGATGATGAGAGGCATGACAGCAAGGAACTTTGATCCTGTAAGATACTCAGGAAGGTGGTATGAAGTTGCTTCACTTAAACGTGGATTCGCCGGTCAAGGTCGAGAAGATTGCCACTGCACCCAGGGAGTATATACAATTGATATGAAAACACCAGCAATCCAGGTGGATACATTTTGTGTTCATGGAGGGCCTGACGGTTATATCACAGGTATAAGGGGTAGGGTTCAGTGTCTTTCAGAGGAAGAAACAGAGAAAACTGAAACTGATTTAGAAAGAAAAGAGATGATTAAAGAAAAGTGTTACCTCAGGTTTCCCACATTACCCTTCATTCCTAAAGAACCGTATGATGTGCTTGATACTGACTATGACAATTTTGCCCTTGTTTCTGGAGCAAAAGATAAGAGCTTTATTCAGATTTACTNCAGGACACCGAATCCCGGGACAGAATTTATAGAAAAATACAAGCTTGTGTTGCCAGAGTTTTGGTATGATGCGAGCAAAATTAAAGACACCCCACAAGACTGTGAAGTGT


gi|125455362|gb|EL467055.1|EL467055 CHTS583.b1_M02.ab1 CHT(LMS) Jerusalem artichoke Helianthus tuberosus cDNA clone CHTS583, mRN 

TATTTGAATCTTTGATTTGTT
|||||||||||||.  || ||
ATAAACTTAGAAATCTAAAAA

EST sequence (targeted fragment marked with yellow):
GCTTCGGCGGGTGATCAGGAAGAATCTCTTCTATCATATACTTGCTTGAATACCAATTGAAGAATCCATGATCATGGAATTAATTAATGTTGACCCGTTTTCTGAGTTCAGAAATATAAAATACTCCCTTTAAGCAACAATCAAGCCATTGAACCATCATCCGCCAGCCCAACAGATGTTCTTAATAGATTAACAGCTGTAAACGTTGAAATAGATGCTGTTGCATCTACAATCGAAGAAGACGTGAAAAACATTTCAAGAACCGAAGAACGAGCACACGATAACAATGATGAAAGTGAACCGCCAGATGGAAAAGAAAGCATTCCGCAGGCTTCTAATGACCTAACTCTTCAACATGCTCTAGCAACAGACCGATTGGAAAGCCTAAAGAGGACAAAGGCTCAACTCGAGAAACAAGTTGCAAGTCTCGGAAATGGATCGAAAGTTGGTAAACAGGAAAGCATCTTGAAGTATCTTGTTAAAGAAGAACCAAATCACAAGCGGAAGCAGAAAGAAGTTCCAAAAACAGGGTAAGAAATTGAAGCGACATAAAACAGTATCCTTGAGTGACGATGGTGATTTCGATGCTGTTTTAAACGCAGCCTCTGCTGGATTCGTTGAAACAGAAAGAGATGAGTTGGTTAGGAAAGGTATTCTAACTCCGTTTCATAACCTAAAAGGATATGAACGTCGGAAGCTTGCCCATCTAATGCAACTGAAGAAGTCAATAAAGTCAATGATTTTTCTACTGCCAACATATCAAGAACTGCTAAGTTAATATCGGAGGCTGCAAAAGCTCGTCCTACAACAAAGCTGTTAGATCCGGATTCCTTACCCAGACTTGAAGCACCAACACGTCCTTTATAAAGACTTAGAACCCACCGCAGTCTCAGAAAACGATGACGGAGAAAAATCTAAAGATTCAAATAGG


gi|125459522|gb|EL471215.1|EL471215 CHTS9859.b1_E18.ab1 CHT(LMS) Jerusalem artichoke Helianthus tuberosus cDNA clone CHTS9859, m 

TATTTGAATCTTTGATTTGTT
|||||| ||||||||.|  ||
ATAAACCTAGAAACTGACGAA

EST sequence (targeted fragment marked with yellow):
GGGGATTTGCAAGTCGAAATGGTGGTGATTGAGCCGGTACCTTCCACCGACATCCAATCAAAACCTACAAAATCAACCGTCACCGGAGCAGATTCCGGCAATGGTAATAAACCAAGCGCCGACGTATCATCTTCCGGCGACGGCGATAAATCAACAGCCGCCGGATACGCATCCGACGGATACGAAACGGCGAGCGAAACGGAAGTTGTAGATGATGAAACTGTTTCCGATAAACCACACGCCGTTGAATCTGAACGGATTTCGGACGAAGTTACTCCGGTCATTAAGGATCAGACGTATGAAGATGCGTTAAATGATGAGGAACATAAGCAGAAAATTTTGACACAAATGAATGAAGCAAAAGTTGAAGGAAATAAGTTATTTGGAGATGGGTTGTATGAAGAGGCATTATTGAAGTATGATTATGCTATCCAACTTGCACCTGAGACGCCATCTTCTTCAGAAATTAGGTCCATATGTCATAATAATCGTGCTACTTGTTTCTTCAAGCTGGGCAAGTTTGAGGACACAGTGAAAGAATGTACGAAAGCATTGGAACTAAATCCTTCATACATGAAAGCTTTAATCAGAAGAGGAGAAGCCCATGAAAAACTCGAAAACTATGATGAGGCTATTACTGATATGAAGAAAATCTTAGAACTGGATCCTTCAAATCACCAATCTAAGAGGGCCATTTTTCGTTTAGAACCATTGGCCATAGAAAAGCGCGAAAAAATGAAGGAAGAGATGATCGGGAAGTTGAAAGATATGGGGAAATTCATTCTGGGACGATTTGGGATGAGTGTCGACAACTTTAAAGCAGTCAAAGATCCAAATACTGGCTCGTATTCTCTCTCATTTCAGCGCTAAAGATAAATGGAGCTCACGTGTTTATAATAATATAGATAATATATGGCACTAAAACATGAATACGGCTGCATCCGTAC


gi|125450155|gb|EL461851.1|EL461851 CHTS1641.b2_B03.ab1 CHT(LMS) Jerusalem artichoke Helianthus tuberosus cDNA clone CHTS1641, m 

TATTTGAATCTTTGATTTGTT
||||| |||||||. ||.|.|
ATAAAGTTAGAAATGAAGCGA

EST sequence (targeted fragment marked with yellow):
GCGGGCGGGAATGGTTTCATCTTTGTTATTTCAAGTCCGAAGTACAAGTCGAGAGATGCACGAAAAGCATATGCAATGAAGCACCCACAACCTCTTGCATACTTTGCTCTTTGTTCAGGAAGCCATTCTGACCCCATGGTGCGCGTGTACACACCAAAGAGTGTTTTCCAAGAGCTTGAAATCGCCAAAGAAGAGTATATTCATACCAACTTCAAGATACAAAAAGGGCAAAAGATTTATCTCCCAAAGCTTGTTGATCTATATGCAAAAGAGTCAGGCTTATGTCATACTGGTTTAGTGGACATGATTGAACACTCGGTGCCCGATTGTTACCAAGATAGCTTCAAGTCGATTCAAAAAGGTAAACCATTGAAGAAATTTGAGTGGGTCCCTCACGACTTCACTTTTCGCTATCTACTTTCCCCTGATTTAGCGAAGTAAAGATTGAAATATCGAGTGCGAGTCATACCCTGATGATGACACAAGATTTTGAGGGTTTCAGTGGTGGCCATTGTAATTGAGTTTGTTATGATGAGTGTTTTTTTCTTTTTTGATGATTATGTTTGGAGATTGATGTGAGTGCCATTTTTTGTTCTCTTGCACTTCTGTAAATTTTTAACAGCAAGAGATGAGTTTGATGAAATTTCATGTATATTGGTATTATAGTTTGCAGTTTTTCAACATAGTTGTTGAATCGAAAAAA


gi|125449685|gb|EL461381.1|EL461381 CHTS15973.b1_I10.ab1 CHT(LMS) Jerusalem artichoke Helianthus tuberosus cDNA clone CHTS15973, 

TATTTGAATCTTTGATTTGTT
|||||| ||||||||.|  ||
ATAAACCTAGAAACTGACGAA

EST sequence (targeted fragment marked with yellow):
GGGGAATGGTGGTGATTGAGCCGGTACCTTCCCCGACATCCAATCAAAACCTACAAAATCGACCGTCACCGGAGTAGATTCCGGCAATGGTAATAAACCAAACGCCGACGTATCATCTTCCGGCGACGGCGATAAATCAACAGCCGCCGGATACGCATCTGACGGATACGAAACGGCAAGCGAAACGGAAGTTGTAGATGATGAAACTGTTTCCGATAAACCACACGCCGTTGAATCTGAACGGATTTCGGACGAAGTTGCTCCGGTGATTAAGGATCAGCCGTATGAAGATGCGTTAAATGATGAGGAACTTAAGCAGAAAATTTTGACACAAATGAATGAAGCAAAAGTTGAAGGAAATAAGTTATTTGGAGATGGATTTTATGAAGAGGCATTATTAAAGTATGATTATGCTATCCAACTTGCACCTGAGATGCCATCTTCTTCAGAAATTAGGTCCATATGTCATAATAACCGTGCTACTTGTTTCTTCAAGCTGGGCAAGTATGAGGACACAGTGAAAGAATGTACGAAAGCATTGGAACTAAATCCTTCATACATGAAAGCTTTAATCAGAAGAGGAGAAGCCCATGAAAAACTCGAAAACTATGATGAGGCTATTACTGACATGAAGAAAATCTTAGAACTGGATCCTTCAAATCACCAATCTAAGAGAGCCATTTTCCGTTTAGAACCATTGGCCATAGAANAGCGCGAAAAAATGAAGGAAGAGATGATCGGGAAGTTGAAAGATATGGGGAACTCAATTCTGGGACCATTTGGGATGAGTGTCGACAACTTTAAAGCAGTCAAAGATCCAAATACTGGCTCGTATTCTCTCTCATTTCAG


gi|125431571|gb|EL443543.1|EL443543 CHTM2049.b1_B09.ab1 CHT(LMS) Jerusalem artichoke Helianthus tuberosus cDNA clone CHTM2049, m 

TATTTGAATCTTTGATTTGTT
 |.||||||||||||| | ||
CTGAACTTAGAAACTATAAAA

EST sequence (targeted fragment marked with yellow):
AAAAAAATATCAAAGATTCAAGTCAAACTTCAACACTCACCTTCTTCATCTCGTCTCCGAAGCTGGAAGAAATGAAGAACCAACATCCGTCTTCTGAAAAAGAGTTTTTAAACAAATTCTACATTCCGGATTACATACTTGCTGATGGAACTGTTGAGGATCTTTCTGAACCACCTGCATGCCCGACACTCGTGTTTATCAACTCGAAAAGTGGTGGTCAGTTGGGTGGCGAACTTCTTATTACATACCGTCCTGTGTTGAATCAGAATCAGGTTTTTGATTTGGGTGAAGATGCTCCTGATCAAGTGTTGCGTAGATTGTACCTAACTTTGGAAAAGCTCAAAGTTAATGGAGATAAATTGGCTGCTAAAATTGAGAAGCAGTTGCGAGTAATTGTTGCTGGAGGAGATGGAACTGCTGGTTGGCTGCTTGGAGTTGTTAGTGATCTGAAATTACCCTATCCGCCACCAATAGCAACCGTGCCTTTAGGGACCGGAAACAATCTCCCATTTGCATTTGGTTGGGGAAAGAAGAATCCAGGAACCGATCGTGGATCTGTTTTAAAATTCTTGGAGCAAGTTTCTGAAGGAAAAGAAATGGAGATAGACAGCTGGCACATTCTTATGAGGATGAAATCTGCCGGCTCTTGTAATCCCATCGCACCCCTCGAGTTACCACATTCTTTGCATGCATTCAATCGCGTGTCTGATACTGATGAACTTAATGTGTCAGGTTATGACACATTTCGTGGTGGATTCTGGAACTATTTCAGCATGGGCATGGATGCTCAAGTATCGTATGCATTTCATTCTGAGCGCAAGTTGCATCCAGAAAAATTCAAAAACCAGTTGACGAATCAGAGCACATATGCAAAAGATCGGTGCGCTCAAGGTTGGTTT


gi|125448896|gb|EL460592.1|EL460592 CHTS14894.b1_L04.ab1 CHT(LMS) Jerusalem artichoke Helianthus tuberosus cDNA clone CHTS14894, 

TATTTGAATCTTTGATTTGTT
|||||| ||||||||.|  ||
ATAAACCTAGAAACTGACGAA

EST sequence (targeted fragment marked with yellow):
GGGGGATTTGCAAGTCGAAATGGTGGTGATTGAGCCGGTACCATCCACCGACATCCAATCAAAACCTACAAAATCAACCGTCACCGGAGCAGATTCCGGCAATGGTAATAAACCAAACGCCGACGTATCATCTTCCGGCGACGGCGATAAATCAACAGCCGCCGGATACGCATCCGACGGATACGAAACGGCAAGTGAAACGGAAGTTGTAGATGATGAAACTGTTTCCGATAAACTACACGCCGTTGAATCTGAAAGTATTTCGGACGAAGTTGCTCCGGTGATTAAGGATCAGACGTATGAAGATGCGTTAAATGATGAGGAACTTAAGCAGAAAATTTTGACACAAATGAATGAAGCAAAAGTTGAAGGAAATAAGTTATTTGGAGATGGACTCTATGAAGAAGCATTATTGAAGTATGATGATGCTATCCGACTTGCACCTGAGATGCCATCTTCTTCAGAAATTAGGTCCATATGTCATAATAATCGTGCTACTTGTTTCTTCAAGTTGGGCAAGTTTGAGGACACAGTGAAAGAATGTACGAAAGCATTGGAACTAAATCCTTCATACATGAAAGCTTTAATCAGAAGAGGAGAAGCCCATGAAAAACTCGAAAACTATGATGAGGCTATTACTGATATGAAGAAAATCTTAGAACTGGATCCTTCAGATCACCAATCTAAGAGAGTCATTTTCCGTTTAGAGCCATTGGCCATAGAAGAGCGCGAAAAAATGAAGGAAGAGATGATCGGGAAGTTGAAAGATATGGGGAACTCAATTCTGGGACGATTTGGGATGAGTGTCGGCTACTTTAAAGCAGTCAAAGATCCAAATACTGGCTCGTATTCTCTC


gi|125453780|gb|EL465473.1|EL465473 CHTS4375.b1_N13.ab1 CHT(LMS) Jerusalem artichoke Helianthus tuberosus cDNA clone CHTS4375, m 

TATTTGAATCTTTGATTTGTT
|||||| ||||||||.|  ||
ATAAACCTAGAAACTGACGAA

EST sequence (targeted fragment marked with yellow):
CGGGATTGCAAGTCGAAATGGTGGTGATTGAGCCGGTACCTTCCACCGACATCCAATCAAAACCTACAAAATCAACCGTCACCGGAGCAAATTCCGGCAATGGTAATAAACCAAACGCCGACGTATCATCTTCCGGCGACGGCGATAAATCAACAGCCGCCGGATACGCATCCGACGGATACGAAACGGCAAGCGAAACGGAAGTTGCAGATGATGAAACTGTTTCCGATAAACCACACGCCGTTGAATCTGAACGGATTTCGGACGAAGTTGCTCCGGTCATTAAGGATCAGACGTATGAAGATGCGTTAAATGATGAGGAACATAAGCAGAAAATTTTGACACAAATGAATGAAGCAAAAGTTGAAGGAAATAAGTTATTTGGAGATGGGTTGTATGAAGAGGCATTATTGAAGTATGATTATGCTATCCAACTTGCACCTGAGACGCCATCTTCTTCAGAAATTAGGTCCATATGTCATAATAATCGTGCTACTTGTTTCTTCAAGCTGGGCAAGTTTGAGGACACAGTGAAAGAATGTACGAAAGCATTGGAACTAAATCCTTCATACATGAAAGCTTTAATCAGAAGAGGAGAAGCCCATGAAAAACTCGAAAACTATGATGAGGCTATTACTGATATGAAGAAAATCTTAGAACTGGATCCTTCAAATCACCAATATAAGAGAGCCATTTTTCGTTTAGAACCATTGGCCATAGAAAAGCGCGAAAAAATGAAGGAAGAGATGATCGGGAAGTTGAAAGATATGGGGAATTCAATTCTGGGACGATTTGGGATGAGTGTCGACAACTTTAAAGCAGTCAAAGATCCAAATACTGGCTCGTATTCTCTCCCATTTCAGCGCTAAAGATAAATGGAGCTCACGTGTTTATAATATATAAGATAATATATGGGCACTAAACATGGATACAACTGCATCCGTACTCTGGAAT


gi|125458268|gb|EL469961.1|EL469961 CHTS8581.b2_J09.ab1 CHT(LMS) Jerusalem artichoke Helianthus tuberosus cDNA clone CHTS8581, m 

TATTTGAATCTTTGATTTGTT
|||||| ||||||||.|  ||
ATAAACCTAGAAACTGACGAA

EST sequence (targeted fragment marked with yellow):
GAATGGTGGTGATGAGCCGGTACCTTCCCCGACATCCAATCAAAACCTACAAAATCAATCGTCACCGGAGCAGATTCCGGCAATGGTAATAAACCAAACGCCGACGTATCATCTTCCGGCGACGGCGATAAATCAACAGCCGCCGGATACGCATCCGACGGATACGAAACGGCAAGCGAAACGGAAGTTGTAGATGATGAAACTGTTTCCGATAAACCACACGCCGTTGAATCTGAACGGATTTCGGACGAAGTTGCTCCGGTCATTAAGGATCAGACGTATGAAGATGCGTTAAATGATGAGGAACATAAGCAGAAAATTTTGACACAAATGAATGAAGCAAAAGTTGAAGGAAATAAGTTATTTGGAGATGGGTTGTATGAAGAGGCATTATTGAAGTATGATTATGCTATCCAACTTGCACCTGAGACGCCATCTTCTTCAGAAATTAGGTCCATATGTCATAATAATCGTGCTACTTGTTTCTTCAAGCTGGGCAAGTTTGAGGACACAGTGAAAGAATGTACGAAAGCATTGGAACTAAATCCTTCATACATGAAAGCTTTAATCAGAAGAGGAGAAGCCCATGAAAAACTCGAAAACTATGATGAGGCTATTACTGATATGAAGAAAATCTTAGAACTGGATCCTTCAAATCACCAATATAAGAGAGCCATTTTTCGTTTAGAACCATTGGCCATAGAAAAGCGCGAAAAAATGAAGGAAGAGATGATCGGGAAGTTGAAAGATATGGGGAATTCAATTCTGGGACGATTTGGGATGAGTGTCGACAACTTTNAAGCAGTCAAAGATCCAAATACTGGCTCGTATTCTCTCTCATTTCAGCGCTAAAGATAAATGGAGCTCACGTGTTTATAATATATAAGATAATATATGGCACTAAAACATGGATACAACTGCATCCGTACTCTGGATTTAATC


gi|125442149|gb|EL453845.1|EL453845 CHTM6564.b1_G09.ab1 CHT(LMS) Jerusalem artichoke Helianthus tuberosus cDNA clone CHTM6564, m 

TATTTGAATCTTT-GATTTGTT
|||.||||||||| |||.||.|
ATAGACTTAGAAAGCTAGACGA

EST sequence (targeted fragment marked with yellow):
CGGGGATTAAGATAATAGAATGAGTATATCAGGTGAAAGTCAAAGTCAAAGTCAAACCATGGGGAATAAGATGACGGGCAACTTATCTGCAGCTTTAGGTGGTACGGGTTTTCCCTATTCAAGAAATCACCTTCAAAATCATCCAACGGCTGGCAATGAATCTAGTTCAGGCGTGTCTCAACAAGGTGTATTTCCAAAAATGTTGCCTAATGCGTTGTCAAGACTTTCAACTCAGCAAGTTTTTCCAGCAAGTCAACCTGACAAAAGTCAATTTAATATCGTGGAATCAACTTCTCTAGGTCAGCAGAATCTCGAGGAACAAGAATCTGACAAGAGAGGGTCAACTGAAAAGGTTGACCTAGGTCAAATGATGAATGGACCAGCAGCAGTCAATGATTCATCTACTGCATCTCAGAAAGATCTTGAAGCATTTGGGCGTTCTCTTAAACCAAATAATTACCATCAACAAGTTTCGCTACTGAACCAAATGAAGGCTTATAAACATACCGATAATGACCCAAATAACAGGGTAATAAGCAGATCGAAAGATTCAGATAACTCATTGCGTGCTCAGCAAGTAACCGTCTCCCCTGGAAGTTCTGAAATGCCCAGATCAACATTGCCAACAGATAACGTTGACCGGAGTTTAGCTTCTCTATCTGCTAATCCACCCTTAAAAGATGCACTTGCGTCTAATAGGAACGGGCCCACTGTTAAAACTGAGAACTCTCACATAAGTCCTCAGATGGCTCCATCATGGTTTGATCAATATGGAACGTTGAAAACCGGTCAAACGTCTTCACAAAGAGCGGATGGCGTAAGGACAGTGGAACAGCCATCTAAAGTTTCTGGTAGTTTGGAGACAACAGCACACGTTTCAAAGGAGCTGCCAGCAAGTGGCGCACCCGATACTAGTAAGGACGGTGCTATCTGGAAAACTCCACTTTCATCATCT