| mature miRNA: ACATTATGAGACGGAGGGAGT species: Hordeum vulgare database: miRNEST The numbers on the right side of the alignments show a score calculated for them. When calculating the score, a mismatch is given a score of 1, bulge: 2, and wobble: 0.5. |
| Predicted miRNA targets | |||||||||
gi|13091206|gb|BF629274.2|BF629274 HVSMEb0010J16f Hordeum vulgare seedling shoot EST library HVcDNA0002 (Dehydration stress) Hor ACATTATGAGACGGAGGGAGT EST sequence (targeted fragment marked with yellow): TGTCGCTCAAGAGGTTGTCGGTATGATCAGTGGAAGGGGTAGAGCTGTCAATGTCGACAGGGAGATTAACAGCCCGACTGCCTCTGTTTCAGCACACTCTATGTCATCGTTCAGATCCCATGGCAGTTCTTAGTTTGCAGGCTAGTCTTTTTCTAGGCATTTCATTGTATAATAAGCAATATAGTACATTCTCTCCTTTCATATTCCTCCGATCTTATTTTGTTGGCTTTCTATTTTCTTTGTTCTGCATCTGCTGGGCTAGCATAGATACTCCCTCTGTCCCATAATGTAATTCTTTATATACTCCAAAAAACGGATCGAAATAACAGGTATAGGATTGGAATCCGAAAAAAAGGAAATAAAGCCAAAGCTTATTACAATAAAATCCCTGGGGGGGGGCCCCGGGACCCAACTCCCCCTTTGGGGAGGGGTTTTACAATCCACGGCCCCGGTTTTTCAAACCCCTGCCCGGGAAAACCCCTGGCGGTCCCAATTTATAGTGCGTTGGGAATAAATCCCCTTTTACCCCCGGGGGGTAATTCCAAAGAAGGCCCCAACAAGGGCCCCTTTCCAAACTTTTTCCCCCCCCTAATGGCGCAATGCGCAAATTGTAACCCTTAAATTTTTTGTAAAAAATCCCGTTAAAATTTTGGGTGAAATAACCCTTTTTTTTTAACCCAATGGGCCAAATATGGGAAAAAACCTCTTTTAAATAAAAAAAAAACACCCCACAAATGGGGTTGGGGTTTG | |||||||||
gi|21164355|gb|BJ485913.1|BJ485913 BJ485913 K. Sato unpublished cDNA library, strain H602 adult, heading stage top three leaves ACATTATGAGACGGAGGGAGT EST sequence (targeted fragment marked with yellow): GGCCACGTCAAGACAGGTGGCCCAATGATGGCCGCGGAGGATTTCTCGTTCTACACGCAGAGATTCCCAGGGGCATTTTTCATGATAGGAACCCGCGACGAGGCCATGGCAACCGCGGTGCATCCACTCCACTCCCCCAACTTTGTGATCGATGAGGGTGTGCTCCCGGTGGGAGCTGCCTTCCATGCTGCTGTGGCGATGGAGTACTTGAACAAGCACGGAACCGTGGCAAAATAGATTACTGATGTCCGTTCGAAATTTAGGATGTTGCAGTGGGCAGCCTGCCGATTACTGTTACTAGGATGGGTGTGTGCATTCATAGGTACTGAGTCGTAACACTCCCTCCGTCCCATAATGTAACAGCGTTTTTGACACTATACTAGTATCAAAATCGTTTTTGTATTATGGGATGGAGGATGTAGTTGTTATGNATGTG | |||||||||
gi|161446594|gb|EX572464.1|EX572464 HDP31P08T HDP Hordeum vulgare subsp. vulgare cDNA clone HDP31P08, mRNA sequence ACATTATGAGACGGAGGGAGT EST sequence (targeted fragment marked with yellow): AAAAAAATACTCTTAAATTATGGGATGAAAGGACTAATGCACAAAGTATAGTGCATCTATCAAAACAAATACAATGTACTCCCTCCGTCCCATAATGTAGTAGTGTCAAAAACCGTACTACATTATGGAGGGAGTATGACTCTGTCTGTATACAGGGAAGCCAAAAGCAAAACAGGCACATTTTTATTCGGCACCCAGCGAAAGAAACTGGTCAGAAGAACAATTACAACAAAAAATGAAACAAACCAGAGTGCTTTGGTCGCTGTTTAAAACTCGACGCGACATTAGTTACAGAAAAGTTGAACCAAACCTATTAGTTATAATTAACTAGCCGTAGTATAGTACGTCGCTCATTCCTTCTACAATCAAGGGAGAGGGTACTGAGATGAAGAAGAAGAATATTTCGAAATGCAATTAACGAATTTGATGGAGAGACTGCTGATGGAGGCCTACGCGCGTCGCCGGTGCGGGGGACGGGACGACAGCTCGTAATTACGTACGTGGTGCAGTATACTGACGCGCTCACGCGCACTGCTTCTACTCGGGGTTGG | |||||||||
gi|21276761|gb|BQ468979.1|BQ468979 HM02P24r HM Hordeum vulgare subsp. vulgare cDNA clone HM02P24 5-PRIME, mRNA sequence ACATTATGAGACGGAGGGAGT EST sequence (targeted fragment marked with yellow): CGGCACGAGGACTCCGTATGTAGACCTCTAGTGAAATCTCTTAAAAGACTTATATTTAGGAACAGAGAGAGTATATGAGTTTTAATACTTTGCGCAACTGTGATCATTCAGGCTGCCGTGGGTACTGGAAAGCGCAGGAGGAAGTACGGCAACCTGAGGCAGCGGGACCTGGACTCGATGCGTGGTTACCGCCGGTGAGATGTGGCTGGCCATGGGGGACACTGCCAGTTAAACCCAGTACGGACATATTTGAGATCTCTAGCTGCAGCTAGCAAGTACAGCCTCTGTCCCATAATGTAAGACGTTTTTGACAGTGGACGGAGGGAGTAGTGACAACATATGCCTTGCTCTGTTTACCAGATGTATATTTGCTGTGTAAGTTCCAATGAACCGGGAGTGAGTATTTCTGTGATCTTCAG | |||||||||
gi|57829384|gb|CX630597.1|CX630597 GNW001C11r GNW Hordeum vulgare cDNA clone GNW001C11 5-PRIME, mRNA sequence ACATTATGAGACGGAGGGAGT EST sequence (targeted fragment marked with yellow): GGGGTCACCACGCATCATGTACAGATAGGTGTTGGGGTTGTTGGGCGTTGCGTTGTCTTGCTTACTCCCGATGTCTTATGATGTATCCTGCTGTCAGTTTTGAACCCTAGATTGAGGTAAAACTTGCCCCAGTGAGAGGAATGTAAAATTTGGCCAT | |||||||||
gi|21164365|gb|BJ485923.1|BJ485923 BJ485923 K. Sato unpublished cDNA library, strain H602 adult, heading stage top three leaves ACATTATGAGACGGAGGGAGT EST sequence (targeted fragment marked with yellow): CTGTTACTAGGNTGGGTGTGTGCATTCATAGGTNCTGAGTCGTAACACTCCCTCCGTCCCATAATGTAACAGCGTTTTTGACACNATACTAGTATCAAANTCGTTTNNTGNANTATGGGCATGGAGGATGTAGNTGTTATGATGT | |||||||||
gi|21975338|gb|BQ766864.1|BQ766864 EBro08_SQ007_H08_R root, 3 week, drought-stressed, cv Optic, EBro08 Hordeum vulgare subsp. vu ACATTATGAGACGGAGGGAGT EST sequence (targeted fragment marked with yellow): GTAAACTGTAAAATCTGATCCTAGCTGTACTAATGTAAAGAAAAAAAAAAAAACATGTGCAGTATCCATTGCTAATTCAAACCCCAGCTGTCTGGCCGTCCTCACGCCTTCAATAATCTATAGCAGGATTGGAAAGTGTATAGTGGAGCAAGTTGGGTGTCCGACGTGTGCGTGAAGGTGAGACTTTTTTTATAAAACTTGAAACACTGAAATGAAGGGGGTGAAATTTATCATGGAGATATGAAACGATGCCCGAATTATGCTGTATGTTGTAGTAGTCTTGCTTGGTAAAAAGAAGAAAGATAACTGAAAGCTTTAGAGACATGGAGTTTCAGCTCTTGAGCTCAATGTACTCTCGTGATCATAGAAAAATACTTCTTTCGTCTCATAATATAAGAGCACTTTAGAATACTTCTTTTGTCTCATAATATAAAAGAGTTTTTGACA | |||||||||
gi|166069248|gb|FD518266.1|FD518266 RUS53F11w HB (Hordeum vulgare cv. Barke) Hordeum vulgare subsp. vulgare cDNA clone HB32H13, ACATTATGAGACGGAGGGAGT EST sequence (targeted fragment marked with yellow): GGACTAAACAATGTTCAAACTTAACCATAATAGATGAACTCATAAGATTCATTAGTCAAACAGGCCATCAGCAATCTATATCAGCCAACTTACAACAAAGTGCACATTAACGGTTCAGTGACTTCTCTGGTAAGAATACACGACACTACGAAACCTCCAGCATCGATCAGGCTCTGGATGTTCACGCGCCACATTTCCGGTCACCAGGAGTGCATCACTACGGATGCGGCGTTATCTTCATGCGAACTTGCAGATGGAGTTTATCGTCGACAAAGAAGGGGCTATCATCAGCACTTATCTCCGACCAAGGAATCCTGCACCCAAAAGCTTGTCTAATGTCGGTGGTGGTCGCGCGCCTCGATATGGAGGCAAACTCCGACGACCGCCTCGCCATTACCTCCATCTCATAATCTATTGTCCCCCTGAGCGGGACATTGCCTTCTAGCTTCCTTACTAAGAGACCAAAAGAGCTGAATGGCTCCGTTCTACCGAGCGCCGAGAGGAAGAAACCATGCCCTGCGCAATAGAATGGTGGCGAGTGTATTGATCCTGATGGTAAGAGCCCGCGGCAGTGCTCACGCTTTATGCTAAAGTTGATCATACAAGACGACTGCTCAATCAGGATGGCACTGGACATGATACGCCCTACTGTCACCAGTGGAAGTAAACTTGAACTCAAAATC | |||||||||
gi|161443234|gb|EX581652.1|EX581652 HDP21H02w HDP Hordeum vulgare subsp. vulgare cDNA clone HDP21H02, mRNA sequence ACATTATGAGACGGAGGGAGT EST sequence (targeted fragment marked with yellow): GGTGGAGAAAACAAACAGTTGCAAGAAGAGAGAGGAGCATAGGTGCCAAGGCTCTGCTATGCCGAGAATGGCTGGACCAGGTTAGTCCATCGCCTGGAGGTAGACGCGGTGGAAACTGTCCATGGTTAGCGTCCTACGGCAGGTCGGTCATTTGCTCTGAGCCTGGATCGAGGCCTCAATGCAGTTCTGGCAGAAGATGTGGCCACAGATGGTCGACAACGCATCGACCAGCTCATTCATGCAGACTGGGCAGCTGAACTTTGGTTCCTTTCGGACCTCCTTCACAGGTGTGTCCGCTGTGTCTATCACAAGGTTGTTGTTGCATGCTCTGGGGCGATCATGGTGTGTAGGGTTCATCCCCAGAGACAGCAGTGTGTTCACATGCTCATCAGGAGCTTCCCCTGGAAAGAAAACAACACAACCAAGTTAGTAAATGGAAACATAGCCCAAAAGGGGGAACTAGGAAAAAAAGGGTGATATACACCAGAGCATACAGCTCCAAGACTGAATAGTACTCCCTCTGTCTCAAAATGTAAGACGTTTTTTGACACGTGTCAAAAAACGTTCATATTGTCAAAAATAACATCTTACATTTTGAGAC | |||||||||
gi|57827612|gb|CX628825.1|CX628825 GBN009F11u GBN Hordeum vulgare cDNA clone GBN009F11 3-PRIME, mRNA sequence ACATTATGAGACGGAGGGAGT EST sequence (targeted fragment marked with yellow): AAGGCGTTTGGCCCCGACCCCTCCTTGAGACTTGACTACCACGGGACCGGACGTAATAATAAGTAAAATAAAACGAGTGCCTCGACCGAGCGTGTACTCTCTAGTCTCTACAGCACTTGTAATCGAACAGCTTGTATCTGGCCTGTGTGCAATATGTGTTCATGCATATTAGTTGTCCCGTGAGCGGCCGCTCAAAGTTTTAAGTACATTTCCAATAACATTACACAAAGTGGTACTTGTGTGTTACACTGTATTGTACAGATACCTGCATGTAGGGCCACCGCAAGGATGCCGAACAACATGTATTATTCTAATCTGCGCCCTCCATCTCATAATATACGAGCATTTTTTTACGCAAGTTACACAAGGATGCACGCTTAGATTTTTTTGATAAAGATGCACACTTAGATGTGTGTTGGAGGAAGAAAAGACCTGCACGTACGGAGCGATGGATCGACGGGTCATCCCTGGGTGCATGAGGGGCGGCATGGTTGCCGGAGTGCGCCCTTGCCAGCGGCCGCTCACAAGTGTACCGTGTTATGATCTCAATGGTGCGGCGACAGTGAATGCCACCAGCTTCTTCAGACATCAATGGTGAAAGAATTGGCATCTTATGTTTCACTGTGAACTGAGAGGATGGCATTCGTATGCGTGTCTACTCTG | |||||||||
gi|161468422|gb|EX592251.1|EX592251 HDP03J09w HDP Hordeum vulgare subsp. vulgare cDNA clone HDP03J09, mRNA sequence ACATTATGAGACGGAGGGAGT EST sequence (targeted fragment marked with yellow): GGTGGATTTTTGTCTAGACATGTACATCAAGTCATATTGGATATCATTGATAGAGCAATGGCTGCCTTTTCTGCCACTGGAATGAATCCTGATAGTGTCCTTCCTGGTGACGATTGGTTCATGGATGTCGCTCAAGAGGTTGTCGGTATGATCAGTGGAAGGGGTAGAGCTGTCAATGTCGACAGGGAGATTAACAGCCCGACTGCCTCTGTTTCAGCGCACTCTATGTCATCGTTCAGATCCCATGGCAGTTCTTAGTTTGCAGGCTAGTCTTTTTCTAGGCATTTCATTGTATAATAAGCAATATAGTACATTCTCTCCTTTCATATTCCTCCGATCTTATTTTGTTGGCTTTCTATTTTCTTTGTTCTGCATCTGCTGGGCTAGCATAGATACTCCCTCTGTCCCATAATGTAATTCTTTTTATACTACACTACTGTCAAAAAATATC | |||||||||
gi|161457250|gb|EX594898.1|EX594898 HDP28K11w HDP Hordeum vulgare subsp. vulgare cDNA clone HDP28K11, mRNA sequence ACATTATGAGACGGAGGGAGT EST sequence (targeted fragment marked with yellow): GAGGGAGTGATTGGTTTTGGTTTTACAGTTCAGTTCTAATTCTACTCTGCTACTCCCTCTGTCTCATAATGTAAGACGTTTCAAGTGTAGTGTCAAAAAACGTCTTACATATAACGGAGGGAGTACTTGACCAAAACAGCAGACAGTAGATAAAAACTAAAAACTGGAATTTAGGAGAGAAAGATATCAGATGCCGATACCTAACAGTATAGCCCACAATAAGATATCATAATTGTGTTAATTGTGCTGCCGGTAGTCAATCTTCTGTTTGTTTGTTTTTTTGCGAATTAATCTTCTGCTAATCAGTATAGCAGAAGGATGGGGTTTGCATTCAACTGTTTATTATACAGAGATGGTTGAAGGAACATGGGCTTACAAAGAAATTTAATCAAGTTCCCTACCCAAAATAAAGTAAAGTAATCAAGTTAGAAGTTGTTACTAATCTTCATGATTTCATTCTTCCATTGAGTCGAACATCTAGCTTGCTTTCCGATTGGCTGCTTAATTTATTTCAACGAAACTACTTGTTTGGTCGACTGCTTAATTTCGATCCAATTTAGTCAAGTATAAGGTTTAGCTCATGGTATATTCTCGTGCAGTTTCTGCAGAGAAAGGAGTAGCCCTGGTGCAAAAATACAGAGGCTCTTGGCGTGGTACATTTGCTGCCTGCTAGAAGCAATTGTGGTGATGTAGCTGCGT | |||||||||
gi|161465572|gb|EX573072.1|EX573072 HDP31A17T HDP Hordeum vulgare subsp. vulgare cDNA clone HDP31A17, mRNA sequence ACATTATGAGACGGAGGGAGT EST sequence (targeted fragment marked with yellow): CCCCATAGTGGATGTCGATAATATAATGATCAGATTCAAAAAAATCACAAACATGATAAGATCAAGCTAAACTATGCTAAAAGAGCCAAAACAGTGAAATCGTCCACGTGTTGCACGTTCGGACATAAACTGGCGGGCAAAGGAACTGACAAAGCAGTTGCTCTGTTCTATTCTTCATTATTTCATATTCCCTACGTCTCATAATATAAGATGATTCTTCACACTATGGAAATGTTAAAAAACGTCTTACATTATACTCCATGCATCTCAAAATAAGTGACTTAAAAATGACTCTACTTTGTATTAAAACTAGCATAAAATTAGATCATTTTTAAATCATTTATTTTGAAACGGATAGAAGTAGTATGGAGGGAGTGCTATATAATTGGAAGTAGATAGGAAAGGCCCATTGTGTTAAAACAGAGAATTGTATTTCTGTTCTTCTTAAGAGTACGTAGGTGCACTTTGAGCTTTCCTTGTGCATGCAAAGTGTGAGCCTCCCGAGTTATTTTGTTTATAGTAGCCGTATCCGTATGACGTGGTGTAGGGAATGAAGAGATTTCCATCCCAATAGGAGGGCCTGTGCTTGGTGGGCGCAGCACCTGCAGCAGGGTTGCAGCCCAGTGTTCTGTCCACCCGCT | |||||||||
gi|217051956|gb|GH217963.1|GH217963 HVSMEg0008P07f2 Hordeum vulgare pre-anthesis spike (white to yellow anther) cDNA library HVS ACATTATGAGACGGAGGGAGT EST sequence (targeted fragment marked with yellow): TCCGGTCCTATTGTGTTGGCCTTCGGGACCGGAGGGAGTACTTGGTAACATGGTGAAATGGAACCAACATGACTTTCATACAAAGACAAATCAGATAACGAACATGGCCGACATATTACAGATTTGTCTGTAAACATAGCATACAATATCTGGAAAACTTCAAGAGTACCATGAAGTTTATGTGTAGCTTTCTCTCAAAAGATCTTTGAAACCTTCATGTTTTCCATTCTTGTTGGCCATTGTGCCACCATTAATTGATTAGGAGGTTATGATTATTGTCTATAGCAAGTCTAGAGTGAATATGTTGTTTCACAGTTTATTTAATTTTAGAGATTTCACTTTTGGGAGGCAATATCTGCAAGTCTTTCCAGAAATACATGTTGATTTGCTCTGCTTGTCTTTCCAATGTAGAAGTATTTCACATTCACAAGATATGGCTGATTTCTGTGTGTTCCTCTATAATTGCTACTCCCTCCGTCGCATAATGTAAGACGTTTTTTTAACACTACACTAGTGTAAAAAAACATCTTACATTATGGGACGGAAGGAGTAATTCAGAACCTCATGTATCAGAAAATTATAAAATATACGCAGTACCATTAATCTGTTGTAAATCTGGACAGCTCATGTTTTACT | |||||||||
gi|161467596|gb|EX593248.1|EX593248 HDP41E18T HDP Hordeum vulgare subsp. vulgare cDNA clone HDP41E18, mRNA sequence ACATTATGAGACGGAGGGAGT EST sequence (targeted fragment marked with yellow): AATATGGTCATTACCATTGAAGATTACAATTTTCTTTTTCCGTTGCAGACCCTTTTGCTAGTAAAAAACTCAATGCCACAAGACACAACGCTCACAGGATTCAGCACCGTGAAACAATTGCCACGGATTTTGTTCCATAGGTCAAACAATTACTCCCTACGTCCCATAATGTAAGACATTTTTTTTACACTGTCCAATAATGTAAGATATTTTTTGACAGTAGTGTAGTATAAAAAGAATTACATTATGGGACAGAGGGAGTATCTATGCTAGCCCAGCAGATGCAGAACAAAGAAAATAGAAAGCCAACAAAATAAGATCGGAGGAATATGAAAGGAGAGAATGTACTATATTGCTTATTATACAATGAAATGCCTAGAAAAAGACTAGCCTGCAAACTAAGAACTGCCATGGGATCTGAACGATGACATAGAGTGTGCTGAAACAGAGGCAGTCGGGCTGTTAATCTCCCTGTCGACATTGACAGCTCTACCCCTTCCACTGATCATACCGACAACCTCTTGAGCGACATCCATGAACCAATCGTCCAGAAGGACACTATCAGGATTCATTCCAGTGGCAGAAAAGGCAGCCATTGCTCTATCAATGATATCCAATATGACTTGATGTACATGTCTAGACAAAAATCGACCTTGTCCGAAGATGATGACAAATTGCATATCCAGGT | |||||||||
gi|57825741|gb|CX626954.1|CX626954 GAN008O24u GAN Hordeum vulgare cDNA clone GAN008O24 3-PRIME, mRNA sequence ACATTATGAGACGGAGGGAGT EST sequence (targeted fragment marked with yellow): CATGTATTATTCTAATCTGCGCCCTCCATCTCATAATATACGAGCATTTTTTTACACAAGTTACACAAGGATGCACGCTTAGATTTTTTTGATAAAGATGCACACTTAGATGTGTGTTGGAGGAAGAAAAGACCTGCACGTACGGAGCGATGGATCAACGGGTCATCCCTGGGTGCATGAGGGGTGGCATGGTTGCCGGAGTGCGCCCTTGCCTCTCCATGTTGGAGCGGCCGCTGGAAAATTCAAGTCATTCGGGAGTTGCAGGACAGCACACATATCAGATCGACACTTGACCTAATACCTAGACTAGAACAAGGGTAGTGGATTTTCGACTGTACATGGACGATTTCTGCCCCTATATACTGCAACTTTTATATCTGGACCATTCCTGGGTGCGCTAGAACTTGATCAGAGCCCAGACCACGGCGACGGAGATCACACTTGCGATGACCGAAACAAGAATGCCCGTGCAGGACCCGCTTTTCCGCATACGCGTGTTGAGAGACTTGAGCTTCTTCTGCACGCGCTGCAGCTGGTTGCTCGTGTCCTCGACCATCTCGTCCAGATCGTCAATTAGCCTGACGTGCAGGTCCAGCTCCTCGTTGATCGCCAGCGCGATGTGCTTCGTGCTGACTATGCTAGCGGCCGCTAGCGGATGTCGAGAGATGTATAGA | |||||||||
gi|21975338|gb|BQ766864.1|BQ766864 EBro08_SQ007_H08_R root, 3 week, drought-stressed, cv Optic, EBro08 Hordeum vulgare subsp. vu ACATTATGAGACGGAGGGAGT EST sequence (targeted fragment marked with yellow): GTAAACTGTAAAATCTGATCCTAGCTGTACTAATGTAAAGAAAAAAAAAAAAACATGTGCAGTATCCATTGCTAATTCAAACCCCAGCTGTCTGGCCGTCCTCACGCCTTCAATAATCTATAGCAGGATTGGAAAGTGTATAGTGGAGCAAGTTGGGTGTCCGACGTGTGCGTGAAGGTGAGACTTTTTTTATAAAACTTGAAACACTGAAATGAAGGGGGTGAAATTTATCATGGAGATATGAAACGATGCCCGAATTATGCTGTATGTTGTAGTAGTCTTGCTTGGTAAAAAGAAGAAAGATAACTGAAAGCTTTAGAGACATGGAGTTTCAGCTCTTGAGCTCAATGTACTCTCGTGATCATAGAAAAATACTTCTTTCGTCTCATAATATAAGAGCACTTTAGAATACTTCTTTTGTCTCATAATATAAAAGAGTTTTTGACA | |||||||||
gi|21948164|gb|BM443538.2|BM443538 EBro02_SQ005_J09_R root, 3 week, hydroponic grown, low nitrogen, cv Optic, EBro02 Hordeum vul ACATTATGAGACGGAGGGAGT EST sequence (targeted fragment marked with yellow): GTGAAATACCTTGATGAAATGGCCATCTATGGAGTGTTTCCGGACGCAGACACATACAATGTGGTACTCAAGTTATTGCTGAAAGGGAGGAAGCTCCGGGAGGCATCAGCAATATTTAAAGAGATGGTCAAGAACGAGTGTTGGCCAAATGAGGCGAATTGTTCACTTGCACTCGGCATGTTCTTGGATACTCGTGACTGGGACACAGGGATCAAGGTGTGGAAATGCATGGCGGCGAATAGCCTGCCTCCACTGGAGGAGGGCGGGAATATGCTTGTATCGAAGCTGAAGGATGAGATGTTGCCTGAGGCATGCAAGTATGCAGAGGACATGATCGATCAGGGTATCAAGTTGAGCTCGTCAACGCTGACAAAGCTGAAGCACAGCCTATGAAAGGTCAAGAAAGGAGCCATTCACGACCGCTTATTTGCAAAATGGAAGGCGCACTAAGTTCTTCTCTCTTACTCCCTCCGTCACATAATGTAAGACATTTTTTGACGCTATTGTAGGGAGCATATCATATACTGTA | |||||||||
gi|59945256|gb|DN159362.1|DN159362 GPN004K19u GPN Hordeum vulgare cDNA clone GPN004K19 3-PRIME, mRNA sequence ACATTATGAGACGGAGGGAGT EST sequence (targeted fragment marked with yellow): GCTCGAGCGGCCGCTATCATGCAACCCAAATCATACAGGTCTAAATGATCATGAAGCAATAGGCCTAGTAACAGTAGATCCTAGTTAAAGCACAACATTCTGTGGTGGGCAATGTACTATGAAATGCAAACCATTACAAGGTGAGCAATGTAACAGAGATGATTATGATGCTGATTTTGTAAGAGACCAAGTATTATGGAATTCCGGTAAGTACGGAGTAAAGACATCTTATTAGTTTGATGGTCAATGCACTTTTTGTACATAACTTATGTATCAATAGAATTATCACCTACCGATTACATGAATTGATCCCATATTTCCTAATAACAATTATGTGGTCATAATGAACTGAAACCAATAGCATAAGAAATACAGGTAATTACCTACTACATGATATCCTATTTAAGCATATTAAAATCATTTAAGTATCAACTTCATAGTAGAATGACAAACTTCATATTGCCAAGTCAATCATTATCATATACTCCCTCCGTCCCATAATGTAAGACGTTTTTTGACACACATTCTGGGACGAATGGAGTAGCTAATATATGTTTGT | |||||||||
gi|60288420|gb|DN186659.1|DN186659 HO28J17w HO Hordeum vulgare cDNA clone HO28J17 3-PRIME, mRNA sequence ACATTATGAGACGGAGGGAGT EST sequence (targeted fragment marked with yellow): AGTAATATTGCTTCAACAGAGCAATTTCCTTTCTCTTATAATGTAAAACCTTACAGTTAAGTACATGCTTGAAAAAAGGGAAACATTTTACACATTAAATTATGGAGCGTCTACCGCCCTTCCAACATCGTGACGCTCATGTTATTCATTGAGCTGCTGGTATTTTCTCCTGTTTCTTTTGCTTCAGAGTTCCTATATGCAAAATACACAGGTCGTTGTGGGGTTGAAAGTGACGTGGTTCCGTTCTCTAACATGAATACAACGGATGACATGAGTGGCCTATTGTAAGGATTATCTTGCACACATAAGAGCCCTATATGAATGCACCGTAGAACTTCAGTTGGTGAACAGTCATCAATAATGGAAGAGTCCACCATATCCATTGGCTTCCCATCATTCCACAAGTTCCATGCATAAGCTAAGAGGTTTGGAAAGTCTGAGAGGTGAGGTAAGCTAATCTTCAGGCCGCTTATGATCTCCAAGAGCAGAACACCAAAGCTGTAGGTATCGGACTTGACAGAGAAGGCGCCATCCATCGCATATTCAGGAGACATGTAACCATATGTACCAACAACTCGGTTGGTGTTTGCTTCTTGCTGGTCGCGACCAAATATTCTTGCCATACCAAAATCGGATATCTTTGGGCTCATATCCACATCTAATAAGATGTTGCTTGATTTAAGATCTCTATGAATTATTG | |||||||||
gi|16312228|gb|BE231018.2|BE231018 HVSMEg0015L20f Hordeum vulgare pre-anthesis spike EST library HVcDNA0008 (white to yellow ant ACATTATGAGACGGAGGGAGT EST sequence (targeted fragment marked with yellow): AAGCCTTGTGCACCGCTAACTACCTCCTCGGTCTCATAATATAAGAGCGTTTTTTATATTACACTACCGAAAGAGTACTTGGCTTGGCTAATCAGTGGCTTGACATCTGGTAATTTTTGGAACCATTTCAGCTACTTGCACTACGGCGCACAGGCTTCAAGGGTAGAGATCTTCAAGGCCAAGAACGGACCAGTCAGCTACTGCGTGCTGCGCGGATACGATGGTACTATACATATATCACTGATTAATTTGGTTTGATATAAGCAGGGCACATCTAACATAATCAAGAACATCTGATCGATGTGCATATATATCCTTTGATCGAATGAATGAAGGCAAATACACCTACATCGGAGAGCGATACGACGCCATATCATCACCGCAAGGAGCGGCGTACGAAAAGTGCAGAGAGGACGTGACCAGGGCGCTGAGATTCAACGCGCCATGCGCGGCCAAGAACTGCACCTTCAACGGCGCGTGGAACGGCGGCTGGGGGCCCGGCCAGGCCGAGCTCTACGTTACCTCCAGCTTCTACTACATGGCAGCGAGACGTCGGCCTGATCGACAGCTGAGCGAGCAGCGGGAAGACCACGCCGGCGGCGTTCAAGCACACCGCCGAGGAGATCTGCCCGATGAGCTTCCTGGAAGCCAAGGGCAGGGTACCACAAAGTTGCGGTCCGTGGGCTTCGCACTACATTTGGGTGGGACCTCGTTTACCATAACTCCCTTGCTTGAGAGCGAGGTACGGCCTGGTAAGCGAGCCAAGGGAAATCACCCGCGGCGCAAACAGGAGTAACACAGAGTAGTTTCTCTCTCAAAGATCCGCTGGGCTCGCTTAGGTAGANCACTCTATGGCTGCTTCGCCCACTAAGCGTGTGATAAAGAACTAATTCTTGTACANTCAGATGTAGATGTGAATAGAGTCCTATNACCCCCCGCGCTCTCACCAGAGAGGGGCTNTCTCATAGATATTGTTAACTATCTTC | |||||||||
gi|94332415|gb|BY877161.1|BY877161 BY877161 Germination shoots Hordeum vulgare subsp. vulgare cDNA clone bastl44e10 3', mRNA seq ACATTATGAGACGGAGGGAGT EST sequence (targeted fragment marked with yellow): TTACTCCCTCCGTCTCATAATATAAAAGCGTTTTTGCCCCTAGTATAGTGTCAAAAATGTCCTTATTTTATGGCCCGAAGGGAGTAACGTCTATGCTCCAACAAGTAATGTTCTGTGGATCCCTGGGTGGCAAACCTATTGCAATAATAGTTTTAATCTCATCTGCATGAGG | |||||||||
gi|21961709|gb|BM100733.2|BM100733 EBpi01_SQ001_F03_R pistil, 1 DPA, no treatment, cv Optic, EBpi01 Hordeum vulgare subsp. vulga ACATTATGAGACGGAGGGAGT EST sequence (targeted fragment marked with yellow): GGTCGACCCACGCGTCCGGGCCAAGTCATTGTCTAACGGGCGGGGCCACAAGGGATCAGTCAAGCAACAAAATTGCAGTGGCAACAAACGGTATCTCGAGAAAGGCCTATGTGCAAAAAGGAGATCGGGAAGAACATTTCGCGTAAGAAGTCCAGCTCATGTGTTTGCTGACGTTGACAGGTCAAATTCTTTGTACCCCAAGGGATTGTTTAGAGGAACATATGTCACATGTGTGCGTCTATTAGTGCACTTTTGTTTTCAGATTAAACCTTCTGGTTAAACAAGCTCACGTCTAAGAACATATGATCAGATTAAACCTTCTGGTTTCCTTGCTGCCTTTCAACTAGTACTAGAATCATGGCAGTAACGAGGTGGATATATGTCTCAAAAAGGTTTAGTGGTAGTATTTCTGAAATTTTTAGATGTTGACGAACTGGGTTGTGTCCCTCGACTTGTGCTCTTTCTTACGAAAGATATTACCTACTCCCTCCGTCCCATAATGTAAGACGTTGTTGCA | |||||||||
gi|161443233|gb|EX581651.1|EX581651 HDP21H02T HDP Hordeum vulgare subsp. vulgare cDNA clone HDP21H02, mRNA sequence ACATTATGAGACGGAGGGAGT EST sequence (targeted fragment marked with yellow): ATGACATTTTTAAACATACATATACCCCCTCTGTCTCAAAATGTAAGATGTTATTTTTGACAATATGAACGTTTTTTGACACGTGTCAAAAAACGTCTTACATTTTGAGACAGAGGGAGTACTATTCAGTCTTGGAGCTGTATGCTCTGGTGTATATCACCCTTTTTTTCCTAGTTCCCCCTTTTGGGCTATGTTTCCATTTACTAACTTGGTTGTGTTGTTTTCTTTCCAGGGGAAGCTCCTGATGAGCATGTGAACACACTGCTGTCTCTGGGGATGAACCCTACACACCATGATCGCCCCAGAGCATGCAACAACAACCTTGTGATAGACACAGCGGACACACCTGTGAAGGAGGTCCGAAAGGAACCAAAGTTCAGCTGCCCAGTCTGCATGAATGAGCTGGTCGATGCGTTGTCGACCATCTGTGGCCACATCTTCTGCCAGAACTGCATTGAGGCCTCGATCCAGGCTCAGAGCAAATGACCGACCTGCCGTAGGACGCTAACCATGGACAGTTTCCACCGCGTCTACCTCCAGGCGATGGAC | |||||||||
gi|161428246|gb|EX581454.1|EX581454 HDP21N02T HDP Hordeum vulgare subsp. vulgare cDNA clone HDP21N02, mRNA sequence ACATTATGAGACGGAGGGAGT EST sequence (targeted fragment marked with yellow): AAGTACATTTCCAATAACATTACACAAAGTGGTACTTGTGTGTTACACTGCATTGTACAGATACCTGCATGTAGGGCCACCGCAAAGATGCCGAACAACATGTATTATTCTAATCTGCGCCCTCCATCTCATAATATACGAGCATTTTTTTACACAAGTTACACAAGGATGCACGCTTAGATTTTTTTGATAAAGATGCACACTTAGATGTGTGTTGGAGGAAGAAAAGACCTGCACGCACGGAGCGATGGATCAACGGGTCATCCCTGGGTGCATGAGGGGTGGCATGGTTGCCGGAATGCGCCCTTGCCTCTCCATGTTGGCGTGCCATCCGAGGTTC | |||||||||
gi|24305012|gb|CA027638.1|CA027638 HZ59I23r HZ Hordeum vulgare subsp. vulgare cDNA clone HZ59I23 5-PRIME, mRNA sequence ACATTATGAGACGGAGGGAGT EST sequence (targeted fragment marked with yellow): CGGCACGAGGGCGGCTCAGTCCACAACCTTGAAAGAAGGCGGCAATGACAAATTCTCAAGCAACTGCAAGAAAGATCCTGGAAATGATTGATGTCCAGGAAGAAGCGATGCCGCCAATGTCACCCCCCGGTTTCCTTGAGCTCATAGAAAGCGCATTGTCATGAAATTATGGAAAATGCTGGAGGCTTACTTGATTCTTGTGGCTGACAAGAGGTTCCTAACCATGCAGTGTTGACTGTACTTTNGAGCACATATACCTCGTCTTGGATGCAGACTGTAGATTGTCACCACGCATATGTACAGATAGGGTTGGGGTTGTTGGGCGTTGCGTTGTCTTGTTTACTCCCGATGTCTTATGATGTATCCTG | |||||||||
gi|161421870|gb|EX580538.1|EX580538 HDP26F19T HDP Hordeum vulgare subsp. vulgare cDNA clone HDP26F19, mRNA sequence ACATTATGAGACGGAGGGAGT EST sequence (targeted fragment marked with yellow): CTTTACACTTGAATGTCAAGGTACTGCTCACAGTTAAATCAGGGTTTCCACTTTATACAGATACACAACTTATGCACAATTCAACAAGATACATAATTAATCTTGCTGTGTTTGCTACTTTGCGATGAATGAAGGATGGTACACAGAGACTGTTAATTATTCAATTCCAAGAACGTGCTTCAGATTTATCTCTGCCATCATTCTGCTTCAGATTTTTAAATCCAAAAGAACTGTGACAGTGACCTCATATCAACAAACATTACATCCTGGAGCATCCAAACTAACACAGCCTATTACTCCCTCCGTCTCATAATGTAAGACGTTTTTGCAAGCTAAAACAACTTGCAAAAACATCTTACACTGTGGGACGGAGGAAGTACATCTCAAGACATTAAAGTTGAAACTTCACCAATTGGGTACTTGCTAGTCGATTTCAACAATCTCCTAGTCTCGTCATCCATTGAGACCTTATCCTGGTCCATTCGTTCATCTATTATCAGAGGCATCATCTCAGCTTTAGCGTACGTGCGCAGGACCAAGTTATATATCACAG | |||||||||
gi|161480266|gb|EX575535.1|EX575535 HDP14J23w HDP Hordeum vulgare subsp. vulgare cDNA clone HDP14J23, mRNA sequence ACATTATGAGACGGAGGGAGT EST sequence (targeted fragment marked with yellow): CTGGGACACAGGGATCAAGGTGTGGAAATGCATGGCGGCGAATAGCCTGCCTCCACTGGAGGAGGGCGGGAATATGCTTGTATCGAAGCTGAAGGATGAGATGTTGCCTGAGGCATGCAAGTATGCAGAGGACATGATCGATCAGGGTATCAAGTTGAGGTCGTCAACGCTGACAAAGTTGAAGCACAGCCTAGGAAAGGTCAAGAAAGGAGCCATTCACGACCGCTTATTTGCAAAATGGAAGGCGCACTAGGTTCTTCTCTCTTACTCCCTCCGTCACATAATGTAAGACATTTTTTGACGCTATTGTAGGGAGCATATCATATACTGTATGGGTTTGGGTTATGTAGGACTGGGAATAGGAGATGACTCTCTTCAGTTAACCATTTCATGGTGACTTATTTTGCTGGAACCATAGGAAGTTGTGCATATACTGTTTGCAGATGCGGCAATTTAGTTCTGTAAACTAGGTGTGCAATGTAACATGTCAGGTTAGAAGTGGTTTAGCAACTGAGGAGTGCAGTCTCCTAACATGGTAATGAACCTCTTTGTCGCCATGAGTTT | |||||||||
gi|161447990|gb|EX578937.1|EX578937 HDP34N10w HDP Hordeum vulgare subsp. vulgare cDNA clone HDP34N10, mRNA sequence ACATTATGAGACGGAGGGAGT EST sequence (targeted fragment marked with yellow): CACTGAGGCACATATAAGGAGAGGAAACCCCTAATTTTGGGGCAGTCACAGAAGGCCACGAATTTGCCTCTCTCTTGGCAGCCACCAAGAGGGGAGAGGCTCCTCCATTGTAGCAGCAAGACCAAGAAAGAAGGGGGGAAGGTGCTGCCGCCCATCACTGGCGTCGTGGCCGCCACTGCCTCCATCTCTTCGGGGCTGAACCTGTCCATCAACAACTCCCTCTTTCTCATCATGATAATGTATGAGTAATCCTCCTCGAGGCTGTGGGTATGTAACATTAGCTATATGTTCAATCTTGCTCTCTCGTGTTCTTGAAATGACACGATCTTGATGTATCACGGGCTATGTTAATATAGTTGGAT | |||||||||
gi|217047770|gb|GH212963.1|GH212963 HVSMEb0010J16f2 Hordeum vulgare seedling shoot (dehydration stress) cDNA library HVSMEb (HVc ACATTATGAGACGGAGGGAGT EST sequence (targeted fragment marked with yellow): TGTCGCTCAAGAGGTTGTCGGTATGATCAGTGGAAGGGGTAGAGCTGTCAATGTCGACAGGGAGATTAACAGCCCGACTGCCTCTGTTTCAGCACACTCTATGTCATCGTTCAGATCCCATGGCAGTTCTTAGTTTGCAGGCTAGTCTTTTTCTAGGCATTTCATTGTATAATAAGCAATATAGTACATTCTCTCCTTTCATATTCCTCCGATCTTATTTTGTTGGCTTTCTATTTTCTTTGTTCTGCATCTGCTGGGCTAGCATAGATACTCCCTCTGTCCCATAATGTAATTCTTTTTATAC | |||||||||
gi|161465410|gb|EX590937.1|EX590937 HDP08J20w HDP Hordeum vulgare subsp. vulgare cDNA clone HDP08J20, mRNA sequence ACATTATGAGACGGAGGGAGT EST sequence (targeted fragment marked with yellow): GAAAGATTTACTTGCTTGAGGAACAAATTCTCAAAGAGAGAGCAGAATCATCGGAATACGCCTCGCAATGCCATGACTTGAAACAGGAATTGTGCAGCAGAGCTTCAGGTCATCAACCAAAACCTATGGCAAGTACAGACCTCCATATAACCAAGGAGAAAGAGCTAGTTCGTGCTGCCGGGAAACTAGCAGACTGCCAGAAAACAATAGCATCACTGAGCGCGCAATTGAAAACCTTATCCGACTTTGATGGATTCATCCCTGGAGTTGAGAACCATGATATCGCCTTAGCTGAAAGCTGGGATGGCGATCTGAAGCTGTTTGATTCAGCTAGTTATCCAGCACAGTTGGGCTGTTTGGCAGTCACATGACTGGTAGCAAAGAAAGGTTGTGGAAAATTATATTGCTTGGCTATCACATAATAAGATTGACAGAATCCTTAGCTGATTCCATATGGAGACAAGTTAATACTCCCTCTGTCTCAAAATGTAAGATAGTGTCAAAAAAATGTATTACATTTTGATAGAGGAAGTACTACCTTCATTTTTAAATATAAGACCTTTTAGAG | |||||||||