| mature miRNA: TCTTTAGTCCCGGTTGGTGGC species: Hordeum vulgare database: miRNEST The numbers on the right side of the alignments show a score calculated for them. When calculating the score, a mismatch is given a score of 1, bulge: 2, and wobble: 0.5. |
| Predicted miRNA targets | |||||||||
gi|24238382|gb|BU987436.1|BU987436 HF14M02r HF Hordeum vulgare subsp. vulgare cDNA clone HF14M02 5-PRIME, mRNA sequence TCTTTAGTCCCGGTTGGTGGC EST sequence (targeted fragment marked with yellow): CGGCACGAGGCTGCGGATAAGGTGAGGGCCCTCGAGTCGAAGATGGCGAGCCTGAAGGATGCTCTCAAGGAGATGGACACGGAGATGGAGGAGATCGCGGAGGAGAGGAGGAAGGGCCATGCTATTGCTGTGCTGCAGCTGGCGGCCGCGCCATGGTGATGCATGGGCGATTCGACATCGTCTTGCGGTCTTTTGTGGGCATCTCTTTCAGCTCATCACACTTGGTCAATCGACCTACTAGTTCTAGATCTAGTTTGTGTTAGAATTAAACCGAGGTACGCGGTCGATTCATCGAGAAACAAACACTGAGGGCTTTAGTCCCGGTTCACCAACTGGGATTAAAGGGGCGGGACTAAAGGTTAGGCCTTTAGTCCCGGCCCTGTTTCAAGCCGGGACCAAAGGTGCTTCACGTGGGCGTCTCGGAGCGTCCTCAGGGGCAGGCCCTTTAGTCCCGGGTCTTAACACGGACCGGGACTAAAGAATTTATGCAGATTTTGTTTATTTTTTGGTTTTAGAGTTTTAAGATTTAGGTGTTCGGGAGATT | |||||||||
gi|13079622|gb|BF621989.2|BF621989 HVSMEa0001H13f Hordeum vulgare seedling shoot EST library HVcDNA0001 (Cold stress) Hordeum vu TCTTTAGTCCCGGTTGGTGGC EST sequence (targeted fragment marked with yellow): TCAGCTTCTGCCGAGGTAATTGCTGACATCGCTCTGTGCCCCTTTGAAGCTGTCAAGGTCCGTGTGCAGACACAGCCTGGATTTGCCCGTGGCTTGAGTGATGGGCTTCCCAAGTTCATCAAAGCCGAGGGTGCTGCTGGGCTTTACAAGGGCATCGTTCCGCTCTGGGGTCGCCAGATTCCTTATACCATGATGAAGTTGGCGTCCTTCGAAACTATTGTTGAGCTTATCTACAAACACGCTGTTCCTGTTCCGAAGGCCGAGTGCAGCAAGTCTTCCCAGTTGGGTATAAGCTTTGCTGGTGGCTACATTGCCGGTGTTTTCTGCGCTATGGTTTCTAATCCGGCTGACAACCTTGTTTCGTTCTTAACCATTGCCAAGGGTGCTACATGGGGCAATGCTGTTAAAAGAATTGGCTTGTTGGGCCTTTTCACCAAAGGGCTCCCCCTTCGTATCGCCATAGATGGGCCTCTAACTGGGGCTAAGGGGGGAATCTATGATGCGTTTAAGGTTATGGTGGAACTCCGAACCACCGGCGGTGCTCCACCAGTGGTTCCGGTAAAGGATTCACCTTAATGAGATTTGGCGGCTATAACAATGTATG | |||||||||
gi|24238382|gb|BU987436.1|BU987436 HF14M02r HF Hordeum vulgare subsp. vulgare cDNA clone HF14M02 5-PRIME, mRNA sequence TCTTTAGTCCCGGTTGGTGGC EST sequence (targeted fragment marked with yellow): CGGCACGAGGCTGCGGATAAGGTGAGGGCCCTCGAGTCGAAGATGGCGAGCCTGAAGGATGCTCTCAAGGAGATGGACACGGAGATGGAGGAGATCGCGGAGGAGAGGAGGAAGGGCCATGCTATTGCTGTGCTGCAGCTGGCGGCCGCGCCATGGTGATGCATGGGCGATTCGACATCGTCTTGCGGTCTTTTGTGGGCATCTCTTTCAGCTCATCACACTTGGTCAATCGACCTACTAGTTCTAGATCTAGTTTGTGTTAGAATTAAACCGAGGTACGCGGTCGATTCATCGAGAAACAAACACTGAGGGCTTTAGTCCCGGTTCACCAACTGGGATTAAAGGGGCGGGACTAAAGGTTAGGCCTTTAGTCCCGGCCCTGTTTCAAGCCGGGACCAAAGGTGCTTCACGTGGGCGTCTCGGAGCGTCCTCAGGGGCAGGCCCTTTAGTCCCGGGTCTTAACACGGACCGGGACTAAAGAATTTATGCAGATTTTGTTTATTTTTTGGTTTTAGAGTTTTAAGATTTAGGTGTTCGGGAGATT | |||||||||
gi|24237153|gb|BU986207.1|BU986207 HF11A03r HF Hordeum vulgare subsp. vulgare cDNA clone HF11A03 5-PRIME, mRNA sequence TCTTTAGTCCCGGTTGGTGGC EST sequence (targeted fragment marked with yellow): GGGTCATGGCTCCACCCGGGACTAAAGGGTGTCTTTAGTCCCGGTTCGAGCCCCGAACCGGGACCAAAGATCCTACTATATAAGCGGGAGTTGGAAATTTCCAACCCAAATCGCCATTTCTCTTCTTCCTCGGACTCTCTCCTGCCTGGCGCAGCACAAACTCGCGCAAGGCCGCCAGGCTGCCCGCCGTCCTCCTCGCCGCTGCTTGCCGTCCTCCTCGTCGTCGCCGTCGTCCTCCTCGCTGCCGCCGTCCTCCTTGCCGCCGCCATCCTCCTCGCCGCCGCCTGCCGTCGTCGACGCCCTCCCTTCCCACTCCAGCCGGTAAGCCCCCCGCCCACTCCTCGCCAACGCTCCTGCCGGTAG | |||||||||
gi|14528796|gb|AV836707.1|AV836707 AV836707 K. Sato unpublished cDNA library: Hordeum vulgare subsp. vulgare seedling leaves sec TCTTTAGTCCCGGTTGGTGGC EST sequence (targeted fragment marked with yellow): AAAAAAAAATCTTTAATAGCAAAAAATGAAAGTAAAATTATTCACAAATTTTAAAGAATTCAAATTTGAAAACTAAATATTTAGTTGTAAGTAGAAAAAAACAAAATAAATAAAGCAAAGAACAAAACAAAAATAATGGAAAAAAATTGAAACTATATGAGAATTTATAGAGAAAATTCAACCTAAATTCAAAGTGAGGTCACAGTGCGTTTAGGCCCGTAAGCCTGCTTTAGAGAGGAGCTCGACATGGTTGGGACAACGGGGCTTATGAACGAGTCGCGGCTCCTCTCGACAAGCGAGGTGGGACTAAACTTTGGAATGCCGCCAGCCCAAGGTCTTTAGTCCCGGGTCGAGCCACGACCCGGGATTAAAGACCCTCATTTCCCGCCACTCCGCCTGCCGAAAAGGGGTCTTTAGTCCCGGGTCGTGGCACGGCCCGGGACTGAAGGTGGTCTTTAGTCCCGGTTCGGGCCACGACCCAGGA | |||||||||
gi|16310374|gb|BI959119.1|BI959119 HVSMEn0018E07f Hordeum vulgare rachis EST library HVcDNA0015 (normal) Hordeum vulgare subsp. TCTTTAGTCCCGGTTGGTGGC EST sequence (targeted fragment marked with yellow): TAACAACCATCTCATTGTAGAGAGATCAGATCAGAGCCTACCTAGCTTCTCAGTTCTCACTCATCTTCGCCCATGAATTTCACCATGGTTGTCCCGGTCATCGACTTCTCGAAGCTCGACGGCGCCGAGAGGGCGGAGACGATGGCGCAGATCGCCGACGGCTGCGAGAACTGGGGCTTCTTCCAGCTGGTGAACCACGGCATCCCCTTGGAGCTTCTTGATCGCGTCAAGAAGGTGTGCTCCGAGAGCTACCGCCTGCGGGAGGCCGCGTTCCGGTCGTCGGAGCCGGTGCAGACACTGGAGAGGCTCGTGGAGGCGGAGCGGCGCGGCGAGGCGGTGGCGCCGGTGGACGACATGGACTGGGAGGACATCTTCTACCTCCACGACGACCACCATTGGCCCTCCGACCCGCCGGGCTTCAAGGAGACCATGCGGGAGTACCGGGGCCGAGCTCAAGAACCTCGCCGCATGGGCTATGGGAGCCATCCGCCAATAACCTCGGCGCTGGACAGGGGGCCCTGAACGCCGTCTTTCCCGGAGGGCCAGCCATCAAACACCATTCTTGGGGGCCCAGGGTTCACCCCCTTAGTGGACCCCCCGCGGGCCCCCGAGCGGGACTAAGGGGGGCGCCCACTCCGCTCGCTGGACCCCGN | |||||||||
gi|21189799|gb|AJ473843.1|AJ473843 AJ473843 S00008 Hordeum vulgare cDNA clone S0000800103H09F1, mRNA sequence TCTTTAGTCCCGGTTGGTGGC EST sequence (targeted fragment marked with yellow): GTAAGGAGCCTTTAGTCCCGGTTCGTGTCCCAAACCGGGACTAAAGGGCTACGCGGTGGGCAGCCCGCATGTGCGCCACCTTTAGTCCCCGCTCGTGTCCCAAATCGGGACTAAAGGTCTGACACGTGGCCTGCCGTAGTGGTGGCAACCGTTGGTATCCCTCTTTAGTCCCGGTTCGTGTCCCAAACCGGGACTAAAGGCCTAACACATGGCCTGCCGTAGTGGTGGCAACCGTTGGTATCCCTCTTTAGTCCCGGTTGGTGGCTCAACCCGGGACTAAAGGCCCAAACGGTTTGCATCCCGCTTCACAAAACCACAACCGAAGCAGAGTCTCTGTCGCGCCGCCCTTTCTCTGTTCTT | |||||||||
gi|57829832|gb|CX631045.1|CX631045 GNW002I15r GNW Hordeum vulgare cDNA clone GNW002I15 5-PRIME, mRNA sequence TCTTTAGTCCCGGTTGGTGGC EST sequence (targeted fragment marked with yellow): GGGGGGCCTTTACCCCGGTTAAGATCGGCTTTAGTCCCGGATCATCAACCGAGACTAAAGAGTGAGGACTAAAGGGTTGGCCACACCCGGGGACTAGAGTCCCTCCACGTGACAGCGAGTGTGTGGCGGGAGGTGGAGGACCTTTAGCTTCGGTTGGTGTCACCAACCGGGACTAAAGAGTTTGCATTTTTTTGTTTGGGTTTAGGGTTTAT | |||||||||
gi|217042880|gb|GH208374.1|GH208374 HV_CEb0011G10f2 Hordeum vulgare (Blumeria challenged) seedling green leaf cDNA library HV_CE TCTTTAGTCCCGGTTGGTGGC EST sequence (targeted fragment marked with yellow): CTTCTATGTCCCCCCTTCACTTCGTTACAGATCGACAGGATATGCAACACCACCGCCATCAGTCGGGGCTAAAGGAGCTATGGACCAGAAGAATGCTAGGAGATACCCTGTGGGGACTTTATCCAATGGGAGGCCGGCAGTTAATAACTCCTACCTTAGCACCAACGCCCCAGCAAGAGCAGCTGGCGTGCAAAGGAAGCTAGAGTTGGATCATCAGGTGAAACCAGAGGGCAACCATAAGCTGACGACGAAGGAGAACGCAATGAACCAGCCTTGGTCCAGACTACCTCCAGCACCAGTGAGGAACAACATGAACTACCTTGCCGCCAAGGAGCAGATCCCTCGTGGTGGCGCGCCAGACATAGCCGAGAAGCTGTCCCAGCTGTCGATGTCCTCCACCACAAACCGGGCGCCGATCATGCCTTCCGACAGGTTTGTGGACCTGAAGGCCACTACC | |||||||||
gi|21150068|gb|BJ471565.1|BJ471565 BJ471565 K. Sato unpublished cDNA library, cv. Haruna Nijo adult, heading stage top three lea TCTTTAGTCCCGGTTGGTGGC EST sequence (targeted fragment marked with yellow): GGCTAGGCTTTAGTCCCGGTTTACTAGGAACCTCTAGTCCCGGTTGGTGTTACCAACCGGGACTAAAGGGTGGTATCAGGGTTTTGTCAGGCTGGGGCCCATGCGAGGGCAATTAGTCCCGGTTGGTAAATACAAATCGGGACTAGAGATAGATCTTCGGTCCCGGTTTATATCACCAACCGGGACTAAAATTATCACTATAAATAGTGCTTCGTCCAGCCCGAGCCCAAGTTCTCTATTTTCTCCTTTCTCTTCTGTGTTCTCTTCCCTTGCTCGAGTTCATCCTCAATTTCTTCCTAGATTTGTGAAGATTTGAGGCACCCCATCCATCCAAGTGTTCACAAAGGTTAGCAACTTTGTCCTTTCATCTCTCATCCCCGTCCTAACCACCATCGATCGCCCTCATTGTCTCGTCGCTGGCACCACCTTGGTGATCCTCTTGTTCTTATCTTTTTATTCCACAAAAATCTTCTTTGGATGATTTAGATAGTTTTCTTACTTGTATGATTGTTTGTTATACATAGTGCCATGGTCTTGATAT | |||||||||
gi|13119452|gb|BF258479.2|BF258479 HVSMEf0015N08f Hordeum vulgare seedling root EST library HVcDNA0007 (Etiolated and unstressed TCTTTAGTCCCGGTTGGTGGC EST sequence (targeted fragment marked with yellow): ACACCACCGCCATCAGTCGGGGCTAAAGGAGCTATGGACCAGAAGAATGCTAGGAGATGGGGCTGTGGGGACTATATCCAATGGGAGGCCGGCAGTTAATAACTCCTACCTTAGCACCAACGCCCCAGCAAGAGCAGCTGGCGTGCAAAGGAAGCTAGAGTTGGATCATCAGGTGAAACCAGAGGGCAACCATAAGCTGACGACGAAGGAGAACGCAATGAACCAGCCTTGGTCCAGACTACCTCCAGCACCAGTGAGGAACAACATGAACTACCTTGCCGCCAAAGAGCAGATCCCTCGTGGTGGCGCGCCAGACATAGCCGAGAAGCTGTCCCAGCTGTCGATGTCCACCACCACCCGGGCGCCGATCATGCCTTCCGACAGGTTTGTGGACCTGAAGGCCACTACCAGACCTCACGGGGAGCCCGTGAGGCGGCCCGTGCCTCTGGGACCCAGGGACACGTGGCATGCCCGAAACAACCCCTTCCGGCGCACCTATTAGATGCCGGGCGAGAGGGCTCTCCTCCAGAGGAAGCTCGTCAGCTGAGGACCATTCCACCGACGCCCGCCTTTTCCGCATCCATTTGCCTATTGGGATTATTGAAACCACAACCACCACCACCCCGGACCACAATAATACCGGCGGTCTTCCTTCCTGGCGGTCGCTACCAAGGTTGGGGGTCTCTTTTTTCATTCGTTTGGTGTTGGGGATTGGAAAGAAATTTAAGAAGATGCCCGAGGGTTCCCCTTTCTCCCC | |||||||||
gi|161433406|gb|EX578226.1|EX578226 HDP38P01w HDP Hordeum vulgare subsp. vulgare cDNA clone HDP38P01, mRNA sequence TCTTTAGTCCCGGTTGGTGGC EST sequence (targeted fragment marked with yellow): GCGCGAAGGCAAGTTCATTGACGAGTCAGCTAACACTAGTAGAAAAACTACTATACGTGAGATACTTTAGTCCCGGTTTGTAAACGGACCGGCACTAATGACCCAACGACTAGGGGGGTGGGCATCATTAATCCCGGTTCGTGTTGAACCTCTAGTACCGGTACTAAAGGGGTGGTGGTAGGCTGGTGTCGGGCTGGGGCCCCACTAGAACCTTTAGTCCTGGTTGGCGGCATGAACCGGTTCTAAAAGCTCACATTTAATCCCGGTTTGTGTCTTCAATCGGGACTAAAAATTTTCCTATATAAACCCTTCGTCCAACCCGCGTTAGAGCTCTCTGTTCTTCCCCTTTCCTATCCTCTTTGTTCTTCCCCAAAGCTCGAGCTCATGATTCATTTTGCCCAAAACTGTCAAGATTTGAAGACCCCCCCATCCATCCAAGTGATCACAAAGGTTAGCAACTTTGTCCTTTTATCTCTCATTGCTAGATTAGCTCTTGCAATGCTCTATAAGTATAATGATTTGTGGGTTTAACTTTGGGAGTAATTATATGTGGTAGTTTATTTGATTTATATGTAATTTGAGCTCAAATTAACTCTTAGTTTGCATATGTAT | |||||||||
gi|94349949|gb|BY861994.1|BY861994 BY861994 Etiolated seedling shoot Hordeum vulgare subsp. vulgare cDNA clone baet40a02 3', mRN TCTTTAGTCCCGGTTGGTGGC EST sequence (targeted fragment marked with yellow): GATGGATAGGAGACCACTAGGCATCCTCTTACCTTCTCCTTTCCTCCCTTGTTTCTTCTTTTCCGGTGACTCTCGCCGGAGTTGTTTTCCTTCACTAGTGGGGACGGGGCCTTTAGCCCCGGCCTGTAAGGGGCTTTAGTCCCGGTTCACCAACCGGGACTAAAGGGGCGGGACTAAAGGCCTAACCTTTAGTCCCGGCCCTCTTACAATCCGAGACTAAAGGTGCTTCACGTCGGCGCCTCGTAGCGCCCCAGAGGCAGGCCCTTTAGTCTCGGTTCGTTACACGGACCGGGACAAAAGATTTTCAGATTTTGCTGGTTTTTGGGTTTTTTTTTAATGAAATTATTTTTGGGTTTT | |||||||||
gi|24236096|gb|BU985150.1|BU985150 HF06E14r HF Hordeum vulgare subsp. vulgare cDNA clone HF06E14 5-PRIME, mRNA sequence TCTTTAGTCCCGGTTGGTGGC EST sequence (targeted fragment marked with yellow): CGGCACGAGGATCGACAAGGCATTTCAAATTTATACACAACTTGTTACTCAACCCATAGTTGACAAAGAAGATTTAGTTCCACCTGTTCCTGTCCTTACTCGATATAAAAAGGAGCTTGGAATCAAAGCTTTCGTAAAAAAGGAAATCCAAGAAGTCAGACCTGTTGATGAGAGAAAATCAAGTGAAATAGTTCAACTTACGATGTCAAAGCTATGTGTGCGGCTTAACAGTCTATATTATGCTATAAGCCAGCTAGGCAAGTTGGAGGACAGCATAAGTGAGCGGTGGGCTAAAAGGCAAAGTGACAAAATTAACATCAGACGATCAATGAACGGCAAGTCAAAGAGCGTAGTCTCCAATCAGAAGAATCAATTTGATGGCAGTAGAAAAGAAATCAATGCTGCTATTGACCGGGGTTAAAGGTCATATTTTGGGACCTCCAACAGCCATTCATCGACAATATGTACAAAAACAATGTTTCGCAAGCTCGATTGGACACTTATTGTCGAAGTTCTTGATTTGGTGCTTGCTCAACTCTGTGACGTCATTGTGGAGCAACTGCGAGATCGTGTGGTTACAGGGCTTCTGCAAGCATCCCTGGATGGCTTAGTTCGGGTAATAC | |||||||||
gi|24237153|gb|BU986207.1|BU986207 HF11A03r HF Hordeum vulgare subsp. vulgare cDNA clone HF11A03 5-PRIME, mRNA sequence TCTTTAGTCCCGGTTGGTGGC EST sequence (targeted fragment marked with yellow): GGGTCATGGCTCCACCCGGGACTAAAGGGTGTCTTTAGTCCCGGTTCGAGCCCCGAACCGGGACCAAAGATCCTACTATATAAGCGGGAGTTGGAAATTTCCAACCCAAATCGCCATTTCTCTTCTTCCTCGGACTCTCTCCTGCCTGGCGCAGCACAAACTCGCGCAAGGCCGCCAGGCTGCCCGCCGTCCTCCTCGCCGCTGCTTGCCGTCCTCCTCGTCGTCGCCGTCGTCCTCCTCGCTGCCGCCGTCCTCCTTGCCGCCGCCATCCTCCTCGCCGCCGCCTGCCGTCGTCGACGCCCTCCCTTCCCACTCCAGCCGGTAAGCCCCCCGCCCACTCCTCGCCAACGCTCCTGCCGGTAG | |||||||||
gi|166072613|gb|FD522424.1|FD522424 RUS56A04w HF Hordeum vulgare subsp. vulgare cDNA clone HF02P09, mRNA sequence TCTTTAGTCCCGGTTGGTGGC EST sequence (targeted fragment marked with yellow): AAACCATTCAAATTTAAAAAATAATTGCACAAACAGAAACTAGACAAAATTTTGAATCTAATGCAAAAAAGAATCACTCAAAAAAATTAAATATCCTAAAAGATATAAGCAATTTAAAACAGAAACTACAAACAGAAATAAAATTTAAAAACAGGAAAAAATAAAAATACAAAACCCCTTTAGTCCCGGTTCGTGGTCCCGGTTCAAAACACGAACCAGGACTAAAGCCTCCAAACCATTTAGTTCCGGTTCCAGACACGAACCGGGACTAAAGGTCCCTCTTGAACCGGGACTAATGACCGACCGGCACCCTTGCCGTTCGAACCGGGACTAATGCTAACATTAGTCTCGGTTCGTAATGAAACCGAAACTAATGTGTAAATTGAGCTGGGACGGAAGCCCCTTTTTCTACTAGTGGCACTTCTACAAACACGTGGCTGTGGACCACATGTCATCCTCACACTAGAAATCAGGAAACAAGTACTAACTGCAGACACCGGACATTTGTCGTACAAAATACTTCCTTTGTACCTGAATAATTGCAGTTG | |||||||||
gi|21189799|gb|AJ473843.1|AJ473843 AJ473843 S00008 Hordeum vulgare cDNA clone S0000800103H09F1, mRNA sequence TCTTTAGTCCCGGTTGGTGGC EST sequence (targeted fragment marked with yellow): GTAAGGAGCCTTTAGTCCCGGTTCGTGTCCCAAACCGGGACTAAAGGGCTACGCGGTGGGCAGCCCGCATGTGCGCCACCTTTAGTCCCCGCTCGTGTCCCAAATCGGGACTAAAGGTCTGACACGTGGCCTGCCGTAGTGGTGGCAACCGTTGGTATCCCTCTTTAGTCCCGGTTCGTGTCCCAAACCGGGACTAAAGGCCTAACACATGGCCTGCCGTAGTGGTGGCAACCGTTGGTATCCCTCTTTAGTCCCGGTTGGTGGCTCAACCCGGGACTAAAGGCCCAAACGGTTTGCATCCCGCTTCACAAAACCACAACCGAAGCAGAGTCTCTGTCGCGCCGCCCTTTCTCTGTTCTT | |||||||||
gi|24271189|gb|BU994206.1|BU994206 HM06C18r HM Hordeum vulgare subsp. vulgare cDNA clone HM06C18 5-PRIME, mRNA sequence TCTTTAGTCCCGGTTGGTGGC EST sequence (targeted fragment marked with yellow): ATCTTATATATATATATATATATGCATAATTATTTCTATTTAAATTATATTAAAACTATTTCCCGAACACCAAACGAGGCATCACGTTAATCTCCCGAACACCTAAACCCTAAAACCCAAAAATAATTTCATTCAAAAAAAAACCCAAAAACCAGCAAAATCTGAAAATCTTTAGTCCCGGTCCGTGTAACGAACCGGGACTAAAGGGCCTGCCCCTGGGGCGCTACGAGGCGCCCACGTGGAGCACCTTTAGTCCCGGCTTGTAAGAGGGCCGGGACGAAAGGTTAGGCCTTTAGTCCCGCCCCTTTAGTCCCGGTTGGTGAACCGGGACTAAAGCCCCTTACGGGCCTGGGCTAAAGGCCCCGTCCCCACTAGTGGTGGAAGAATGAGTTGAAAACGTTTGTCGACAAAGAAGAGACACCAGAATTCACCGGCCGGTTTGAGAAGATCGGAGATCAATGACCCGCATTTGTGGCCCACAAGACATTGGAAAAGAGTAAGAAGATGTCAGCGACAAACAAGAAAATGCTACGAAGAAGAAGCATCACCATCGCACGGGNGTCAGGTGGTTACCTCAAAGCCCGACCTTTGTGGGACAAGGCTCAGAATGAC | |||||||||
gi|161476416|gb|EX584278.1|EX584278 HDP04O20T HDP Hordeum vulgare subsp. vulgare cDNA clone HDP04O20, mRNA sequence TCTTTAGTCCCGGTTGGTGGC EST sequence (targeted fragment marked with yellow): ACTTACAACTAATTTTTTGTTTTTTGGCACCAACCGGGACCAAAGGCCGTGTGCTGGCTCGGTGCGGTGCTATGTTTAATTATTTTTTCTAGTTTCTTTGCTTTATTTTTTGTTTCTAATTACTTATTTATTTTCTTTTATGATAATTCTTTTAGTCCGGACTTCTTGTTTTATTAAAGTTTATTTTATTTTATTTTATTTCTACTTACATCATTAATTTTCATCCCTTTGTGACTTCATATGTTATTTTTCATGCATTTACTGATTATTTTGAGCTATAAGACCCTGAAATTGAAAAGCATTTCAAATGAACTCTAAAAAGGTTGGAATTTGGCATGGTATCATCATTTCATCCACATAGCATATGCAAGAAAGTTGAGAGGGTTACGACAAAAACTGGATGCACTTCGTGTACAAAACGGACAATCTCTTTCGAAGTATCAGGATTTCATACGGAAACTTTTCTGTTACAACAGGCATTTCAAATGAACTACGAAAAGGTTGAAAGTTGGCATGGTATCATCAATAATAG | |||||||||
gi|24273554|gb|BU996571.1|BU996571 HM14A17r HM Hordeum vulgare subsp. vulgare cDNA clone HM14A17 5-PRIME, mRNA sequence TCTTTAGTCCCGGTTGGTGGC EST sequence (targeted fragment marked with yellow): AGAAGAAATTATTTTTTGTCATTTAATTTTGCTATTGTATAGTGTATATGCTTAAGTGTTAATAGTGTTTCTTAGATTATTGCTTAATTTTGCTATTGTATATGCTTAAGTGTTAATAGTTTAATTTTGCTATTGTATATGCTTAAGTGTTAATAGTTTATTTTTAGCAAGAAAATTAATAAAACTAGTTTAATTTTGCTATTGTATATGCTTAAGTGTCCGGGACGGGGCTCCGCCCGGCTGGTATTTTAGAGTTTAGGTTCTAGCCAAGACCCGGGACTAAAGGTCCTCCTATATAAAACGACACTTCGAAGTTTCCAACCCCTCTTATATAGTTTTTTAGTTTATTAGTTAATCAAATGTCCATTTTTTGCAGAACTATGGATCCACATATCAGGAACCTCGAAGAGGAAGAACTTCTCGAAGATATAATCAAAGACGGCCCCGACGTTGAACCAGCTGAATCTTCGACGTCATATCTAAACGACTCCAGATATGGAATGGAGGTCGAGCGACATGAAGATGAAGCCGATGGGGCAGGAGATAGGTCCAATGACGGAGAAGGTGATAGCTCCACTGATGGAGAAGC | |||||||||
gi|21150068|gb|BJ471565.1|BJ471565 BJ471565 K. Sato unpublished cDNA library, cv. Haruna Nijo adult, heading stage top three lea TCTTTAGTCCCGGTTGGTGGC EST sequence (targeted fragment marked with yellow): GGCTAGGCTTTAGTCCCGGTTTACTAGGAACCTCTAGTCCCGGTTGGTGTTACCAACCGGGACTAAAGGGTGGTATCAGGGTTTTGTCAGGCTGGGGCCCATGCGAGGGCAATTAGTCCCGGTTGGTAAATACAAATCGGGACTAGAGATAGATCTTCGGTCCCGGTTTATATCACCAACCGGGACTAAAATTATCACTATAAATAGTGCTTCGTCCAGCCCGAGCCCAAGTTCTCTATTTTCTCCTTTCTCTTCTGTGTTCTCTTCCCTTGCTCGAGTTCATCCTCAATTTCTTCCTAGATTTGTGAAGATTTGAGGCACCCCATCCATCCAAGTGTTCACAAAGGTTAGCAACTTTGTCCTTTCATCTCTCATCCCCGTCCTAACCACCATCGATCGCCCTCATTGTCTCGTCGCTGGCACCACCTTGGTGATCCTCTTGTTCTTATCTTTTTATTCCACAAAAATCTTCTTTGGATGATTTAGATAGTTTTCTTACTTGTATGATTGTTTGTTATACATAGTGCCATGGTCTTGATAT | |||||||||
gi|60277794|gb|DN182537.1|DN182537 HO20G01S HO Hordeum vulgare cDNA clone HO20G01 5-PRIME, mRNA sequence TCTTTAGTCCCGGTTGGTGGC EST sequence (targeted fragment marked with yellow): GCACGAGGCTCATTCTCCTCCACCTCTTGAAGCCATTTCTTGAAATAGGTAAGAAAACGCGACACCATGGCACTGTCATTCGTGTACACGACATTGAGTTCGGTCGTGCCATGTGCGAGCACCTCTCTGTAGCGAGTGGTTGGCATGGTGGAAGAAGTGAAGGGAAGAAGAGAGGGGAAGAAGAGAGGGGAAGAAGAGAGGAGAGCGAGAGAGAAGAAGAAACAGAGAAATGGCGAATCTTCTTTGGTTCACGCTTTTCATCGATCGAAACGATGCGGGAGGCAAACTTTTTGGACCTTTAGTCCCGGGTTGAGCCACCAACCGGGACTAAAGGGGGATACGAACGAGTGCCACCACCGCGGCACGCCACGTGTCAGACCTTTAGTCTCGGGTTGAGCCACCAACCATGACTAAAGGGGGATACAAACGGTTGCCACCACCGCGACACACCACGTGTCAGTCGCTAGATCTTTAGTCCTGGTTTTTGGCATGAATCGGGACTAATGCATCGAACCGAACCACGACTAATGCAT | |||||||||
gi|9419483|gb|BE421640.1|BE421640 HWM012cC.03r ITEC HWM Barley Leaf Library Hordeum vulgare subsp. vulgare cDNA clone HWM012cC.0 TCTTTAGTCCCGGTTGGTGGC EST sequence (targeted fragment marked with yellow): TGGGGNCCGCGGGTAATGAGCGGCATTACCCTACTAACGGGAACAAAAGCTGGAGCTCCACCGCGGTGGCGGCCGCTCTAGAACTAGTGGATCCCCCGGGCTGCAGGAATTCGGCACGAGGCATCGGCTGCATCTCGAAAAGAATGCATGCCTTCTCTGTAAGTGGTTGTGCGTCAATCACCGTACATCCATGGATGGCTCATCTGTGTTATACGACAGTATATCAAATACAATCACGATCCTAAAAATTAGTACCGCACGGTCTAAACGAGGAAATATAGTTGCTAACCTTTTAGAATAAGTAGAAATAAAGAGGAAGAGGTTTAAGCGTGGCTCAGGCATCTCATATCGTAGTTGTGTTCGGTGAACTGAAGCGGCATCGCTCTAACACACATTTCAACAAACACCTCTAGTGCATCAAAAAAAGTGGAGAGCAAGCACCCACCCACAATCCTCCATCCAAGAAAAATGCAAGGAAGAGGGGAGAGGGGGGCTGTGCTATATATAGGCAGAGGACTTTAGTCCCGGTTTGAGACACGAACTGGGACTAAAGGTGGCGCACATGCGGGCTGCCCACCGCGTAGCCCTTTAGTCCCGGTTTGGGACACGAACCGGGACTAAAGGCTCCTTACGGGCCGGGACTAAAGCCTCGAGGGGGGGCCCGGTACCCAATTCGCCCTATAGTGAGTCGTATTACGCGCGCTCACTGGCCGTCGTTNTACAACGTCGTGACTGGGAAAACCCTGGCGTTACCCAACTTAATCGCCTGNNNNNANNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNCANNNNNCNNNCNNATNGNNNNNNNNGNNANNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNCNNNNNNNNNNNNAANNNNNNNNNNNNNNNNAANNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNCG | |||||||||
gi|21190541|gb|AJ474585.1|AJ474585 AJ474585 S00008 Hordeum vulgare cDNA clone S0000800243E09F1, mRNA sequence TCTTTAGTCCCGGTTGGTGGC EST sequence (targeted fragment marked with yellow): GGGACTAAAGGGGCGGGACTAAAGGCCTAACCTTTAGTCCCGGCCCTGTTACAATCCGGGACTAAAGGTGCTTCACGTGGGGCGCCTCGTAGCGCCCCGGGGGCAGGCCCTTTAGTTCCGGTTCGTTACACGGACCAGGACAAAAGATTTTCAGATTTTGCTGGGTTTTGGGTTTTTTTT | |||||||||
gi|21802715|gb|BQ661582.1|BQ661582 HM04C12u HM Hordeum vulgare subsp. vulgare cDNA clone HM04C12 3-PRIME, mRNA sequence TCTTTAGTCCCGGTTGGTGGC EST sequence (targeted fragment marked with yellow): GAGGCTTTAGTCCCGGCCCGTAAGAATAGTCCCGGTTCGTGTCCCAAACCAGGACTAAAGGGCTATGCGATGGGCAGCCCGCATGTGCGCCACCTTTAGTCCCGGTTTGTGTCTCAAACCGGGACTAAAGTCCTCTGCCTATATATAGCACAACCCCCCTCTACCCTCTTCCTTGCATTTTTCTTGGATGGAGGATTGTGGGTGTGTGCTAGCTCTCCACTTTTTTTTATGATATAGAGGTGTTTGTTGAAATGTGTGTTAGAGCGATGCCGCTTTAGTTCACCGAACACAACTACGATATGAGATGCCTGAGCCACGCTTAAACCTCTTCCTCTTTATTTCTACTTATTCTAAAAGGTTAGCAACTATATTTCCTCGTTTAGACTGTGCGGTACTAATTTTTAGGATCGTGGTTGTATTTGATATACTGTCGTATAACACAGATGAGCCATCCATGGATGTACGGTGATCGACGCACAGCCGCTTACAGAGAAGGCGTGCATTCTTTTCGAGATGCAGCCGATGAGAACAAGCATGGTGGTGGCTATATGTTTTGTCCATGTGTTGAATGTCGGAATGAGAAGGATTACACTTCCTCAAGAATCATTCAGAGCCACCTGCTTCGGTCCGG | |||||||||
gi|9419483|gb|BE421640.1|BE421640 HWM012cC.03r ITEC HWM Barley Leaf Library Hordeum vulgare subsp. vulgare cDNA clone HWM012cC.0 TCTTTAGTCCCGGTTGGTGGC EST sequence (targeted fragment marked with yellow): TGGGGNCCGCGGGTAATGAGCGGCATTACCCTACTAACGGGAACAAAAGCTGGAGCTCCACCGCGGTGGCGGCCGCTCTAGAACTAGTGGATCCCCCGGGCTGCAGGAATTCGGCACGAGGCATCGGCTGCATCTCGAAAAGAATGCATGCCTTCTCTGTAAGTGGTTGTGCGTCAATCACCGTACATCCATGGATGGCTCATCTGTGTTATACGACAGTATATCAAATACAATCACGATCCTAAAAATTAGTACCGCACGGTCTAAACGAGGAAATATAGTTGCTAACCTTTTAGAATAAGTAGAAATAAAGAGGAAGAGGTTTAAGCGTGGCTCAGGCATCTCATATCGTAGTTGTGTTCGGTGAACTGAAGCGGCATCGCTCTAACACACATTTCAACAAACACCTCTAGTGCATCAAAAAAAGTGGAGAGCAAGCACCCACCCACAATCCTCCATCCAAGAAAAATGCAAGGAAGAGGGGAGAGGGGGGCTGTGCTATATATAGGCAGAGGACTTTAGTCCCGGTTTGAGACACGAACTGGGACTAAAGGTGGCGCACATGCGGGCTGCCCACCGCGTAGCCCTTTAGTCCCGGTTTGGGACACGAACCGGGACTAAAGGCTCCTTACGGGCCGGGACTAAAGCCTCGAGGGGGGGCCCGGTACCCAATTCGCCCTATAGTGAGTCGTATTACGCGCGCTCACTGGCCGTCGTTNTACAACGTCGTGACTGGGAAAACCCTGGCGTTACCCAACTTAATCGCCTGNNNNNANNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNCANNNNNCNNNCNNATNGNNNNNNNNGNNANNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNCNNNNNNNNNNNNAANNNNNNNNNNNNNNNNAANNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNCG | |||||||||
gi|21802663|gb|BQ661530.1|BQ661530 HM03N22u HM Hordeum vulgare subsp. vulgare cDNA clone HM03N22 3-PRIME, mRNA sequence TCTTTAGTCCCGGTTGGTGGC EST sequence (targeted fragment marked with yellow): GAGGCTTTAGTCCCGGCCCGTAAGGAGCCTTTAGTCCCGGTTCGTGTCCCAAACCGGGATTAAAGGGCTACGCGATGGGCAGCCCGCATGTGCGTCACCTTTAGTCCCGGTTTGTGTCTCAAACCGGGACTAAAGTCCTCTGTCTATATATAGCACAGCCCCCCTCTCCCCTCTTTCTTGCATTTTTCTTGGATGGAGGATTGTGGGTGTGTGCTAGCTCTCCACTTTTTTTGATGCGCTAGAGGTGTTTGTTGAAATATGTGTTAGAGCGATGCCGCTTTAGTTCACCGAACACAACTACGATATGAGATGCATGAGCCACGCTTAAACCTCTTCCTCTTTATTTCTACTTATTCTAAAAGGTTAGCAACTATATTTCCTCGTTTAGACCGTGCGGTACTAATTTTTAGGATCGTGATTGTATTTGATATACTGTCATATAACACAGATGAGCCATCCATGGATGTACGGTGATCGACGCACAACCGCTTACAGAGAAGGCGTGCATTCTTTTCGAGATGCAGCCGATGCGAACAAGCATGGTGGTGGCTATATGTTTTGTCCATGTGTTGAATGTCGGAATGAGAAGGATTACACTTCCTCAAGAGTCATTCAGAGCCACCTGCTTCGGTCC | |||||||||
gi|40955559|gb|CK569985.1|CK569985 HO15A23w HO Hordeum vulgare cDNA clone HO15A23 3-PRIME, mRNA sequence TCTTTAGTCCCGGTTGGTGGC EST sequence (targeted fragment marked with yellow): GATCGTACGAGAAATTTTATTATATATTCATCAACGTGTACAATATGTAGTAGCTAAAATATGTTTGAAATGAAAAAGAGTTAAATGGAATACGCAAAATCAAAATGAAAAATAAACTATAAACCCTAAACCCAAACAAAAAAATGCAAACTTTTTAGTCCCGGTTGATGACACCAACCGAAGCTAAAGATCCTCCACCTCCCGCCACACACTCGCTGTCACGTGGAGGGACTCTAGTCCCCGGGTGTGGCCAACCCTTTAGTCCTCACTCTTTAGTCTCGGTTGATGATCCGGGACTAAAGACCGTTTCTAACCGGGACTAAAGGCCCATTCTCCACTAGTGGGCATTTGCATCGATTGATGCACACAGCCATTCTATTGTATAATTTTTAAGGTATTACATAAATAGAAAAAAAAAACACGACCACGAATAATACATTTGTACATAAGACTCTCGTGTTCACTAAACCTATTGTTATGCTACCATAGAAACCTCTTGAATAAAGCTCGTACGTCCATCTCCAAATGCTTGCATCCAAAGTCTCGAAACTTCAAGCCTCCACATGCTGATGTAAGGAGTACGTACGGATTCGGTGCGTAGCTATGTAGATAACCTTGTCATGTCAGAAATATGCTATTCAAAAACGCATATCCAGCAACCACCCCTCCTTCATTTAGTGAAGCTGCTTTGGTCCTCAAC | |||||||||
gi|24217715|gb|BU966922.1|BU966922 HB02M08r BC Hordeum vulgare subsp. vulgare cDNA clone HB02M08 5-PRIME, mRNA sequence TCTTTAGTCCCGGTTGGTGGC EST sequence (targeted fragment marked with yellow): CGGCACGAGGTTCAATTTAAGGGTCATTTAGCTCAAAACAAAAATCAGTAAATGTAAGAAAACTATCAAATAGGCCGACGGACCTTTTGTCCCGGTTCTAGCCACCAACAGGTACGAAAGTACTCTTCTTCCCGCCCTTTTGGGCTAGCGGAAGTGTGGCTTTGGTCCCGGTTGGTGCCACAAATCGAAACCAAAGGTTTCACATATAGTGCGGGAGTTGTCGAAATTGACCTTTAGTCCCGGTTGATGCAACAACCCGGGACTAAAGGTCTGCTTTGGTCCCGGTTCGGGCCAACAACTGGAACAAAGGTGTTCGTATATTGAGGGAGTTGTCAAAATTTCCACCAACTTCCATTCCCCCCCGTT | |||||||||
gi|21802663|gb|BQ661530.1|BQ661530 HM03N22u HM Hordeum vulgare subsp. vulgare cDNA clone HM03N22 3-PRIME, mRNA sequence TCTTTAGTCCCGGTTGGTGGC EST sequence (targeted fragment marked with yellow): GAGGCTTTAGTCCCGGCCCGTAAGGAGCCTTTAGTCCCGGTTCGTGTCCCAAACCGGGATTAAAGGGCTACGCGATGGGCAGCCCGCATGTGCGTCACCTTTAGTCCCGGTTTGTGTCTCAAACCGGGACTAAAGTCCTCTGTCTATATATAGCACAGCCCCCCTCTCCCCTCTTTCTTGCATTTTTCTTGGATGGAGGATTGTGGGTGTGTGCTAGCTCTCCACTTTTTTTGATGCGCTAGAGGTGTTTGTTGAAATATGTGTTAGAGCGATGCCGCTTTAGTTCACCGAACACAACTACGATATGAGATGCATGAGCCACGCTTAAACCTCTTCCTCTTTATTTCTACTTATTCTAAAAGGTTAGCAACTATATTTCCTCGTTTAGACCGTGCGGTACTAATTTTTAGGATCGTGATTGTATTTGATATACTGTCATATAACACAGATGAGCCATCCATGGATGTACGGTGATCGACGCACAACCGCTTACAGAGAAGGCGTGCATTCTTTTCGAGATGCAGCCGATGCGAACAAGCATGGTGGTGGCTATATGTTTTGTCCATGTGTTGAATGTCGGAATGAGAAGGATTACACTTCCTCAAGAGTCATTCAGAGCCACCTGCTTCGGTCC | |||||||||