mature miRNA: TTTATACTCCCTCCGTCCCAA species: Hordeum vulgare database: miRNEST The numbers on the right side of the alignments show a score calculated for them. When calculating the score, a mismatch is given a score of 1, bulge: 2, and wobble: 0.5. |
Predicted miRNA targets | |||||||||
gi|161455806|gb|EX592021.1|EX592021 HDP03O10w HDP Hordeum vulgare subsp. vulgare cDNA clone HDP03O10, mRNA sequence TTTATACTCCCTCCGTCCCAA EST sequence (targeted fragment marked with yellow): GGGGAGACAATGGTGATGAGGAGCCATGCTTGGACATCGATGTCAATCTGAGGTCACCCTGGAGGTATACACGAAGCCATTCAGCTTGCTCCCGCTGTCGGCAGTGGAGAAACCAGGCAACCTGCTGATGCAAGGGCTGCTTGACAGGCTTGTGCCGATGCTGGATTCCTGGGCTTCATGGCCGGGTCGGTTTTCATCAAATCCAGCCGACTGCACCACCAAGGAAGAATCACGAGGAAAACAATCATACATACACGGCGTGGGTTAATTTGTGGATGTGGATTGATGCTTGCATGATACAAACCCACTGTACGTAGAGTAGTACTCCCTCCGTCCCAAAATAAGTGTCACAACTTTGTACTAGCTCTAGTACAAAGTTGTACTAAGCTTGAGTCACTTATTTTGGAACGGAGGGAGTATAATAGAGTAGAATTGGCCAGGGATAGTCTTTCCGAAACAGAGACAAGAAAATGGGGATAGATATGTTCAACAATCATGATGCAAACCTTCAAGATCGCTGATGTGAAGATGTTATTCAATCCCACTGTTTCAGGC | |||||||||
gi|166068313|gb|FD518712.1|FD518712 RUS30F07w HB (Hordeum vulgare cv. Barke) Hordeum vulgare subsp. vulgare cDNA clone HB04F18, TTTATACTCCCTCCGTCCCAA EST sequence (targeted fragment marked with yellow): ATACTTTGGTTTTTATAAAACTCTGCTGCCAAACTAGGCCTTCCACTTTCAGTGTAGTGTCAAAAACGTTCTTATATTGTGGGACGGAGGGAGTACAACATAAGTTCAACACAACAACCATAAGCTAAGCCCATTGCTGAAAACATGGGAATGCTCATTAAACCAAATGTACCAGCACCAAACTACAGATAATGAGTTATATAAACCTATTTCCAGAAACATAATATGGGATAATTACATTTTTTAATTTACAGTTGAAGATCCCTACACATACTCCACGATATGTGCAATGCACTGATTGGGATGAAAACCTCAGATGGCTTCAAGAACTTACACTTCCCATAAGTTAATTGCATGAATTCAGTGGAATTCTTTGGGCTTGCTTCTCGAGGTTTTTCCACATTTCATCTTTAAATATGTGCAACAGATGATGTCATTATGTATTAGCCATGGTATATTTTTTAACAAGCTGCTCATATAATGGAAGATGATTCTTAGAAACAAAGACCCTGAACCCTTCAAGAAGTGTGAGTCGCCCTGGAGAAGAAAACAGTTTCGCTATTGCTTCAAGTGAGTCTTTGATGTGCATGGTTTTCAATTTTAAGGCCTTCATAAATTCAACAAACTCTCCATACTCTGCAGTACTGAGCTTTTCTCGAGCCAACTTC | |||||||||
gi|24242890|gb|BU991944.1|BU991944 HD08G04r HD Hordeum vulgare cDNA clone HD08G04 5-PRIME, mRNA sequence TTTATACTCCCTCCGTCCCAA EST sequence (targeted fragment marked with yellow): CGGCACGAGCTATTTCTTTAGGTCAGCGTGGGACAAACAGAAGCAAAGGTTTGTCTACTATAACATGAGGTCTACTTCCTCCGCTCGGAATTAGTTGACGCTCAAACGGATGTATCTAGCACTGAAATATGTCTACATACATCCGTTTGACGGTTTGAGCATCAACCGATTCTGGACGGAGGGAGTATATGTGCATTTAACTTCTCCGTGGAATCAACACATCTATCACCTAATGCCCCATTTTCACTAGTAATTTGATTATGTATTAGTTGCATTCTGTTTCAAAGGATGCAACTGCTTGCTTTAATTCTCCTCTCCATGTGCAGATAGAGGCTATCATGAATGACTTCATTCAGTTGGAACCTCATTCCAATTTATTTGAATCAGAGACTATGATGGAAGGTCAGTCTTTTGTCTTGCTGGGCTATCTGCTATCAGTTGTAATCGACAGTTTGTTGCTATTGAATTTCTTGTGTTAACACTTAACTATTTGGGAGAAGTCTTCATCCAAGCTACTTTTGCAATTGAGTATGGTCTTAATGTGAAAGAACAGTCAATCTTCATGAAGTTGTGAGACATTGCCCACAAAAAATAGTTGTTTTTCTAACAATTGATATCGTCTATATAGGTACCCT | |||||||||
gi|166067270|gb|FD520292.1|FD520292 RUS16A09w HA Hordeum vulgare subsp. vulgare cDNA clone HA18G06, mRNA sequence TTTATACTCCCTCCGTCCCAA EST sequence (targeted fragment marked with yellow): CTTTTTTTTAGGAAACAACCAAAATAATCGTTTGGGACGAATTTTGTCCTGAAATCCCCCAACAACAACTATTTTGGAACGGAGGGAGTACAAGCAGACCATCCATATCACCAATAAAATCACAGTCAACTAAGAAAATTCATGATAGTTCACATCGTCACATCAGCATGTGGCTTGAATGCTGGAAACTAAATGCTGGTGCTTCTGCCCCTTGGGAGTTCTACAGACGCAGTGAGGCCTGCTGGCGCTTCCCATCGACAGCTTCCTTCAGCTTCCTCCCAAGCGCAAAGGCAAGAGGGGGTGGCACAGCGTTGCCAATCTGCCGGTGCTTGCTCTGGATGTTGCCCGCAAACTGGTAGCTGTCAGGAAAGCCCTGAGATCGGGCACATTCACGGACCGTGATAATCCTATCCTGGTCAGGGTGGAAGCACATGCCGACCTTACCCATCGGCTGAGGATCAGTCACAGATGTAGGGAAATTGCCCTCCCAATCTAACCTCCCATACAGCCCCTTCCACTGGTTGTGCCTTTTGGCGGTGTTAGGCAAGCACCAAGGTATCAGGTCCACCATTTGCCCAGAAGATAGCTTCACCTTCTCATCTGGCAGGTCATGCCAGTCACAGCCAGGTCGCTTGGGAATGTGTTTGCATCTTATGAGATTTAGTTCATTCATCTCCT | |||||||||
gi|11882257|gb|BF618523.1|BF618523 HVSMEc0005O20f Hordeum vulgare seedling shoot EST library HVcDNA0003 (Etiolated and unstresse TTTATACTCCCTCCGTCCCAA EST sequence (targeted fragment marked with yellow): TTTTCTGTTCAATCTTTAAAAGGTCTTATATTTTGAAACGGAGGGAGTACAAGTTTTCTTAACGCAAAAATACAGTGTAAACACACCCGGTTTCGTAAAATGTAATCACACAATGACACAACAGCACACCCCTGTCAAGCACAGGTACAACCTCGTTGTAGGACGAACAGCATAACATAATACAGCTTGACACAATCACACATCCGTCTTGACGTAGAGGTCCAACTTTAAAACAGCAGTGCTCGACGTGGCGCCGAACTTGCTCATCAGGCTGTACCCCCTCGCCAGCCGGAACCTTCCCGTACCACCGACCACGGCCCGCTTCCGTGCCGCCTTCCCGTCTGGGCCGAAATCGACTCGGCCGTTCAGCACCAGCGTGCTGCCTTTGTAGTCCCCGTTCGTGAACACCACGGTGAGGAGCGTGGAGAACACCCCGTACCTCTGCAGGTCGGTCTGCTTTGATATCCCCTGTACGCGGCACAAAAATCTACGAACCCCGCTTCGGACCCCTTGACCGGAACTTCGTGAATCAAAAACGCTTGAACGTTCCATCCCTTGTATTTGCCCCCCAAACCGGGGAGGCCCATAN | |||||||||
gi|21148707|gb|BJ470204.1|BJ470204 BJ470204 K. Sato unpublished cDNA library, cv. Haruna Nijo adult, heading stage top three lea TTTATACTCCCTCCGTCCCAA EST sequence (targeted fragment marked with yellow): ATTTTGGGCACGGAGGGAGTATGACCTTACAAATTTTTATNCTGTTATAGGTTATAGAACACAAGCCCTATGACCACAAAGCCGATGTTTTTAGTTTTGGAATTTTGTTGTGGGAACTGCTCACTGGGAAGATTCCTTATGAGTACCTGACACCATTACAAGCAGCTGTAGGTGTGGTTCAGAAGGGGTTGCGGCCTACAATACCAAAAAATGCGCATGCAAAGCTCACGGAGCTTCTTCAGAAGTGTTGGCAGCAGGACCCTGCTGAAAGGCCAGATTTCTCCGAAATATTAGAAGCTCTTAAGAAAATAGCAGAGGAGGTTGGAGATGAGCACGACGGAAAGCACAAGGACAAAAGCCTGGGTGGATTCTTTTCGTCTCTGAGGGGGCGAGGACACTAAGGTGGCACAGGTGTACATGATTTGCAATCCATTTGAACGGGCCGTGAACGAAGATCAGCGCCTGTTTGTCAGCATACCCAGTGCCAGTACATTGAGATGGATGCCTGCTGCAGTGAACTTGTC | |||||||||
gi|161415433|gb|EX590264.1|EX590264 HDP12L23T HDP Hordeum vulgare subsp. vulgare cDNA clone HDP12L23, mRNA sequence TTTATACTCCCTCCGTCCCAA EST sequence (targeted fragment marked with yellow): CTACTACTCCCTCCGTTCTAAAATTAGTGTCTTAAGCTTAGTACAATTTTGTACTAGACCTAGCGCAAAGTTAAGACAGTTATTTTGGGACGGAGGGAGTATATTATAGTAGTTCATACAAAAACTACCAAGAGAAGCATTACCATAACCCAATCTTACCGTAGTAAACACAACTAACTAGGCCGAGAGGTGGTTCTTGATGTACCTATTAACCCAAACCGTTTTGTGAGGCACGCTAAGCTTGACGAATGCCCTGGCAACGTGAGCATTCTCGCACAAATAAGCATAGTAGTGGGCAAGATGCTCCTGCTCAAACCCCGGGAGGCCCTTCATGTTAGCCCAGAGGCCGTCGGGGACATCGGTGTCTCTCCTACTGCACTTCTCTACGGCTTCTGCTAGGTGATCGAGAACACGGGTCATTGTGCATAGCAGGCTGTCATCGTTCTTCACCTTGGCCTTCTTTGGTGGCGGTGGGGGCGGCAAACTGCCAGAGGAATCACCACTATCTCCTTCATCAGTGTTAGTAAAGGACATTGCAGCCCCTTCAACACCTTTGGCAATAATAAGGCCACCCCCTCCATTCACGTTTTCATTCACG | |||||||||
gi|8904347|gb|BE216735.1|BE216735 HV_CEb0011G06f Hordeum vulgare seedling green leaf EST library HVcDNA0005 (Blumeria challenged TTTATACTCCCTCCGTCCCAA EST sequence (targeted fragment marked with yellow): GTTTTTTTTTTTTTTTTTTTTTATCTATCATCCAAAAACAATTTGGAATTTAAAGATTCTACTAGGAAACTACATACAGATGTTTATAGACATACTTTAGAGTATACATTCACTTATTTTGTTATGTACGTAGTCCACTAGTAAAATCTCTTAAAAGATTTATACTGTATTTAGGAACGGAGGGAGTATTAAGCAGTACGGCTCTTATTTATTTTTATATTTATATTTATATGACCACATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATACACACACATACGCGTATTATTGGCGGGGGGTGCGACGTAAAGAGGCTTTATGGGCATAAGGAGATGTGGGAGTTATTATCGCCACTGCGTGCGTGAGTGGACACGGCCCTGGGGTGTTGGTGAGCTCGGGTAAACGTGTGCGTAGGAGACGTTCAAGGGATTGGGTATGCTTGGGGAACACAAAAGTCCGCCACACATGAGCAGCCCGCCCAAACACGTGACGTCGAAACTTCCCGGCGCCCCGGGAGAATAGTGGGGCGCACGCACCCTAGTCGCCGTGCGTGAGTAAGCAGCGGGGGCGAATCGCGTGGTACCAGATAATAGCAGGGCGCCGCCGCTCCGAAGACGTGACGGGAAGTAATCGCAGTGCGGCCGCTACACCATGACTGGGGTCGAAAAAGAGTGCGGCGCCCCC | |||||||||
gi|21150595|gb|BJ472092.1|BJ472092 BJ472092 K. Sato unpublished cDNA library, cv. Haruna Nijo adult, heading stage top three lea TTTATACTCCCTCCGTCCCAA EST sequence (targeted fragment marked with yellow): GGNCTGCAGGCAATTCGGCACGAGGCACTTATTTTGGGACGGAGGGAGTATGACCTTACAAATTTTTATCTGTTATAGGTTATAGAACACAAGCCCTATGACCACAAAGCCGATGTTTTTAGTTTTGGAATTTTGTTGTGGGAACTGCTCACTGGGAAGATTCCTTATGAGTACCTGACACCATTACAAGCAGCTGTAGGTGTGGTTCAGAAGGGGTTGCGGCCTACAATACCAAAAAATGCGCATGCAAAGCTCACGGAGCTTCTTCAGAAGTGTTGGCAGCAGGACCCTGCTGAAAGGCCAGATTTCTCCGAAATATTAGAAGCTCTTAAGAAAATAGCAGAGGAGGTTGGAGATGAGCACGACGGAAAGCACAAGGACAAAAGCCTGGGTGGATTCTTTTCGTCTCTGAGGGGGCGAGGACACTAAGGTGGCACAGGTGTACATGATTTGCAATCCATTTGAACGGGCCGTGAACGAAGATCAGCGCCTGTTTGTCAGCATACCCAGTGCCAGTACATTGAGATGGATGCCTGCTGCAGTGAACTTGTCCGGATGGCAACTTTTCAGTTGTAGTTCCACTCATCGGCTACAGCCAATAGTTCTTTTTTGTCTGGTTATTTACTTCCGGGTTCTATTACATGTAACATAGGGAGAGAGTGCTCGTGGACTGTGTACATTATTTAATCTGATTCCTCTA | |||||||||
gi|21145274|gb|BJ466768.1|BJ466768 BJ466768 K. Sato unpublished cDNA library, cv. Haruna Nijo germination shoots Hordeum vulgare TTTATACTCCCTCCGTCCCAA EST sequence (targeted fragment marked with yellow): CGATGTCAACATCTAATATGAATGACCCTGATGATTTGGAACTTGCGGAGATAGAGATTATGATAGCTGAACAAAAGAGCCGTGGAAAGGGACTAGGTCAAGAAGTGACCTTAATGATGATGTCGTTTGCAGTAGAGAAATACGGAATTCACACTTTCAGAGCAAAAATTAGTGACTCAAATACTGCATCGTTAAAGCTCTTCAGAAAATTGGGCTTCAAGGATGCTTCCCACAGTGCAGTTTTTAAGGAGGTGACATTGGAGGCGCCTGCAGCTGAACTCCCGTTGAGCTCTCCTCTGACCATAGGAAGCTGGTGACATCTGATTATGTGTCCCAAGTTGTGCTGCAGTGGACATGCATCAGTGGCTGGTCTTCACCAAAGTACCAAACTGATACAGGCTAATTGTGTGCGGTATCGGCACACTCATGCTGATGAGTACTGCCTTCATCTGGCTACAATTGCTTCAGGCAATTGCGTATAAAGATATACTCCCTCTGTCCCAAAATAAGTGACGCAAATTTAGTATTAAGTTAGTACAAATTTTATACTAAAGCAGCGACACTTATTTTGGAACGGAGGGAGTATATAGCAATAATAGGAAGAACCCTGTGTTGGGTTCCTGAGCAGTTGAGGTGGCGCCTGATGTTTTGAGGTGAAATGTTGCAAGTTCAGAACAATTTACCATGGCAGCATATGGAACAAGTTACAGTAATCAGGAACTGTAGACGGGTATANAATCGTTAATAGACGGTACACA | |||||||||
gi|161477642|gb|EX595629.1|EX595629 HDP24G01T HDP Hordeum vulgare subsp. vulgare cDNA clone HDP24G01, mRNA sequence TTTATACTCCCTCCGTCCCAA EST sequence (targeted fragment marked with yellow): GACTTAAACTTCATATTAACTCATTTTGGAACGGAGGGAGTATAACATAAACTCTACTTACAACATAACCACAATTTATTATCATATACTCCCTCCGTCCGAAATTACTTATCGCCGAAATTAATTAAAATAGATGTATCCAGAACTAAAATACATCTAGATACATCCATTCCTTCAACAAGTATTTTCAGACAAAGGGAGTAGTTACAGACATGCACAGTGATGAGGCACAGAAACTACAACAATAAAAAGTATGCCAAGACATTTATTCTTTATTTTTCTTATTGTTGTATCAGCCCAGGTAACAAACTGGGAACGTGATGTAATGTCCAATACACACTACAGATAACACTTCCCTTGGAGGTCTTTTGAATACCACATATGGAAGTTGGTCGAGCAGTAGCTGTGCCAGGTTCCGATTATATGCAGCGCCTCACATGCGTGACCTCGTCGAAACTTGGTGAGCCGTCCG | |||||||||
gi|60290839|gb|DN189078.1|DN189078 HO18P01w HO Hordeum vulgare cDNA clone HO18P01 3-PRIME, mRNA sequence TTTATACTCCCTCCGTCCCAA EST sequence (targeted fragment marked with yellow): AAGCTTGAGACAGTTATTTATGGGATGGAGGGAGTACAATTTTCGTTACATTGGAGAAATGGATTCCGCTAATATATATTGATAGGGGGTATTTCACAAATTTGGGCAACACGGTCATGAATGCGTCGTCATCGTTACCCATCTGGAACTTAGTTAAATAGGCAGGCAACAATTCCTGCCAATCGAAGGGGTTGAGCCAATCCTTACCTATCCAAACAAGCACTTACTGCAAAAAACAGCATATTCATATTCATATGTAAGAATACCCTAATACTTGCTTGAAAAAGTACTGGCTAGCATAAAACAGTGTTTGCAAAACTCCCTCAGCATGTTCAGTTCCCTCATAATTTGAGAGCATATCTCAGTTCTTCCCGAAGTGAAAGGGGTTGTTGGTGAGCCTCTATATATATGGCTTTTGACGCTCAATTTTCTCGGGGATTTTTCATTGATTTCTGCATGAGGTACCTGCCAGTGTAAAACCCTGCTGTATACCATGCATTCAGAACGACAGCAAGATCACTGTCTGCTCCTGTGGTGTCTAAATTCAGGTTCATGCCCACAGTTGTGTTATTCTCCCTTGCAATTCCACCTTCATTTACAATATTTGGAAAGGAGGCAGCATCTCCAGATATTGTACTTTTCATGAAATTCGCGGCACCTTCAGCAGTCATCATTGCCGCCTTAGCAACTTGATCAT | |||||||||
gi|24219577|gb|BU968784.1|BU968784 HB08J08r BC Hordeum vulgare subsp. vulgare cDNA clone HB08J08 5-PRIME, mRNA sequence TTTATACTCCCTCCGTCCCAA EST sequence (targeted fragment marked with yellow): CGGCACGAGGGACATCTGATTATGTGTCCCAAGTTGTGCTGCAGTGGACATGCATCAGTGGCTGGTCTTCACCAAAGTACCAAACTGATACAGGCTAATTGTGTGCGGTATCGGCACACTCATGCTGATGAGTACTGCCTTCATCTGGCTACAATTGCTTCAGGCAATTGCGTATAAAGATATACTCCCTCTGTCCCAAAATAAGTGACGCAAATTTAGTATTAAGTTAGTACAAATTTTATAGTAAAGCAGCGACACTTATTTTGGAACGGAGGGAGTATATAGCAATAATAGGAAGAACCCTGTGTTGGGTTCCTGAGCAGTTGAGGTGGCGCCTGATGTTTTGAGGTGAAATGTTGCAAGTTCAGAACAATTTACCATGGCAGCATATGGAACAAGTTACAGTAATCAGGAACTGTAGACGGGTATATGAATCGTTAATGAGACGGTACACATTGTTCTGAGGC | |||||||||
gi|21147445|gb|BJ468941.1|BJ468941 BJ468941 K. Sato unpublished cDNA library, cv. Haruna Nijo adult, heading stage top three lea TTTATACTCCCTCCGTCCCAA EST sequence (targeted fragment marked with yellow): AATTCGGCACGAGGCACTTATTTTGGGACGGAGGGAGTATGACCTTACAAATTTTTATCTGTTATAGGTTATAGAACACAAGCCCTATGACCACAAAGCCGATGTTTTTAGTTTTGGAATTTTGTTGTGGGAACTGCTCACTGGGAAGATTCCTTATGAGTACCTGACACCATTACAAGCAGCTGTAGGTGTGGTTCAGAAGGGGTTGCGGCCTACAATACCAAAAAATGCGCATGCAAAGCTCACGGAGCTTCTTCAGAAGTGTTGGCAGCAGGACCCTGCTGAAAGGCCAGATTTCTCCGAAATATTAGAAGCTCTTAAGAAAATAGCAGAGGAGGTTGGAGATGAGCACGACGGAAAGCACAAGGACAAAAGCCTGGGTGGATTCTTTTCGTCTCTGAGGGGGCGAGGACACTAAGGTGGCACAGGTGTACATGATTTGCAATCCATTTGAACGGGCCGTGAACGAAGATCAGCGCCTGTTTGTCAGCATACCCAGTGCCAGTACATTGAGATGGATGCCTGCTGCAGTGAACTTGTCCGGATGGCAACTTTTCAGTTGTAGTTCCACTCATCGGCTACAGCCAATAGTTCTTTTTTGTCTGGTTATTTACTTCCGGGTTCTATTACATGTAACATAGGGAGAGAGTGCTCGTGGACTGTGTACATTATTTAATCTGATTCCTCTAACTGGCTGTAACTTGCACATGAAATAAG | |||||||||
gi|13089970|gb|BF627748.2|BF627748 HVSMEb0005L03f Hordeum vulgare seedling shoot EST library HVcDNA0002 (Dehydration stress) Hor TTTATACTCCCTCCGTCCCAA EST sequence (targeted fragment marked with yellow): GAAAAATTAAGGCCAACCAGCCAACCATGGCAACCAACAAGAGTATTAAGAGCGTGGTTATTTGTGTTCTCATATTGGGTTTAGTTCTGGAGCAGGTCCAAGTAGAAGGCAAGAGTTGCTGCAAGAACACGACGGGCAGAAACTGCTACAACGCCTGCCGTTTCGCCGGTGGTTCCCGACCAGTCTGCGCAACTGCTTGTGGTTGTAAAATCATAAGCGGCCCAACATGTCCTAGGGACTATCCTAAGCTGAATCTTCTCCCTGAATCCGGTGAACCAAATGCGACTGAGTACTGCACAATTGGATGCAGGACTTCCGTTTGTGACAACATGGACAATGTTTCCCGTGGCCAAGAGATGAAATTCGACATGGGACTCTGCAGCAACGCATGTGCCCGTTTCTGTAATGATGGTGAAGTCATTCAGTCTGTTGAAGCCTAATCATGCCTTCTTGGGCATGATTTCTATGGCCAAAGTCGTTTTGACTTTGTCTGATCAACAATCTTAGTACCATCGCCGGATCATGAGCGGTGAGTCGTGATAAGTGTGGGAAGGGAATGAAGCCTTTATGCCGTTGTGAGGTGTTTGGGTGGGAGGGAGGATAAGACGGTGCAGACGGTTAATCATTGTAGGATTATAATTCCGTTTGGAGGGACCCGGAGCCCAGTGTAAGCTTGAAGGAGGGGTGGAGAGGAGGAAGTGTAGTATGGATTGGGACAGTATTGTGGGTGGGTTAGGTGTGTAGGAGGCATATGCGAAGACTAACAGGTTGGTAT | |||||||||
gi|161469252|gb|EX582389.1|EX582389 HDP13P04T HDP Hordeum vulgare subsp. vulgare cDNA clone HDP13P04, mRNA sequence TTTATACTCCCTCCGTCCCAA EST sequence (targeted fragment marked with yellow): GAAACATCATTATATATTCATTTATACGTAAGAATTACATCGACAATGGCCTGTCTTTTACGCATGCCAGTGCTTCGCGGCCCTCTCTATATTTACTTTCTCCACTGTTTCATGCAGACTAGTTATTGTCATCGCATACCAGGGTACATGATGAAGAGGAAAATATAGGACCAGAAATGTATACACTATATTAGTTATATGGAACACACTGTATTATACTATCATGCATGCGTCAGTACTATTTATCTTAGATTGCATGCATTTTGATTCATGGTAGTTATGTATGATGACATGCACCATTATTATGTTATAATCCACTAATGATGCAGATGCAGTCCTGCCTTTTGCTTCACGGCGTTCTCCAGTTCGTTACAAAATGTTTGGCCCTCCTTGCTCATTGTTCGTTGGGTTCTCTGTTTCAATATAAAATATGATACAATTGTAAGTAATTTTGTATAAAATTTCCACCCCGTCAAGTTGGATCATATATAATACTCCCTGCGTCCGAAAATACTTGTCCTAGAAATGAATAAAATGAATGTATCTATAACTAAAATAAGTCTAAATACATGATTTTCTAGAACAAGTATTTCCGGACGGAGGGAGTATATATTAGCACATGCATGCATTTAGTCAAAATATAGGAAACAAATTGACACATTTGTAGCGTTACTAC | |||||||||
gi|21968239|gb|BQ759767.1|BQ759767 EBpi05_SQ004_H09_R pistil, 8 DPA, no treatment, cv Optic, EBpi05 Hordeum vulgare subsp. vulga TTTATACTCCCTCCGTCCCAA EST sequence (targeted fragment marked with yellow): GTGGACAGCAACATATCGGCAGCGATGGCCCTGATAAGGGGGAGTGCGGCGGCGTCCAGATGCTTCTCCGATTCGGTCGGCACAGTCAACCCCGAGGCCCTGGTTGGACAAATAGTGGGACACGCCGATCAGGAAGTGTTCAAGACAATAACAAGCAGTTACTACTTACTAGCGGGGAGTTCATGGAATCACTTTTCTTTGAAGTGGCGGCGAGGAAGCAGCCCTCGATTGGGGCCATGGTGCTCTGTCGGCGGGCTAGGAACAGCGGCGACTAGGGACTAGCCAAACTCTAGCACCAGAATGGGCGGTGGCGGGGAAGGAGCAGTGGTTTCCGGGGTACTTGGGGGAAAGGAGGAAGAAGCAGAGGAGGATTGATTAGCAGGGGATTTTAAATCACAAGGTTGTTTTTGCAAAACAACAAATGAACTAAGTCTTGGATATTCTTTTTCGGACGAAGGGAGTATAAGTATTTGTTATGCCCTGTTGTGCCATGGTGATTTATGTATAACCGAAATTCGGAATGAACTCAAAGTTGGCATGTGCAAGTGCGTGCAATATTCTCAGGAAAAAAAAAAAAAA | |||||||||
gi|21062323|gb|AJ463403.1|AJ463403 AJ463403 S00002 Hordeum vulgare subsp. vulgare cDNA clone S0000200081B10F1, mRNA sequence TTTATACTCCCTCCGTCCCAA EST sequence (targeted fragment marked with yellow): TCGGCACACTCATGCTGATGAGTACTGCCTTCATCTGGCACAATTGCTTCAGGCAATTGCGTATAAAGATATACTCCCTCTGTCCCAAAATAAGTGACGCAAATTTAGTATTAAGTTAGTACAAATTTTATAGTAAAGCAGCGACACTTATTTTGGAACGGAGGGAGTATATAGCAATAA | |||||||||
gi|94334049|gb|BY877604.1|BY877604 BY877604 Germination shoots Hordeum vulgare subsp. vulgare cDNA clone bastl53g02 3', mRNA seq TTTATACTCCCTCCGTCCCAA EST sequence (targeted fragment marked with yellow): TCTTGAGTAGGCATTGTGCTGCAAATGGAGTGCTCATAATCCTCCTGGTTGTTTGAGCATCTTGCACGTAAGGGTTTCTTTGCATGCTGAATGAATGGCACCTGACGTGCTGCCAAGTGAAAGCTGCCGTGATATGCTCCCTCCGTCCTAAAATTGTCCTAAAATAAGCGTCTTAAGCTTAGTACAATTTTATACTAGAATCAGTACAAAGTTGAGACAGTTATTTTGGTACGGAGGGAGTATATAACTAGGGTCGAAAAAAGCGACGTGAGAGAGTCCGTCTGATTTTCGTTGTTCATTTGGATTAAAGTATTGAATATATATTTATGCATAGAGAGAATGGCGTTTT | |||||||||
gi|161458785|gb|EX589276.1|EX589276 HDP20H15T HDP Hordeum vulgare subsp. vulgare cDNA clone HDP20H15, mRNA sequence TTTATACTCCCTCCGTCCCAA EST sequence (targeted fragment marked with yellow): GAGGGAGTATTTAGGAACGGAGGGAGTACAAAATATCATGATCCCTACAGTACAAAGCTCTAGCTGGAGATAATGGTGCCAGTTTTGCACCGGATGTGGTCTCGAGAATCTATACCAACATTTTACATCGAAGCGGCTTGCCCACATCTCTCCGTGGATGATGCCACGGTGGCCTCCTCATCGCCAAAGTTCGGTGCCTTGGGAATCAGGCCAAGGATCTTGAACATTGCCTGGTCCGCATCAAAGTCGTTGTTTGCAGTTGTCAGGAGCTTTTCACCGGCGAAGATCGAGTTGGCCCCAGCAAGAAAGCAGAGAGCTTGCTCTGGCATGGAGAACCGTACTCGCCCTGCCGAAAGTCTCACCATTGCCTTTGGCATCACAATCCGAGCGCTGGCAATCATGCGGATCATTTCCCATATCTCTACAGGCTTCTGATCCTGAAGAGGTGTGCCTTTGACAGCAATCAATGCATTGATAGGAACACTCTCTGGGTGTGTTGGCAAAGTGGCCAGTGTATGCAACAGCCCTACACGGTCTTCCTCCGCCTCTCCAAGACCAATAATTCCACCTGAGCAGACGCTTATTCCAGCTTCACGGACATGCTGAAGAGTCTGTAATCTATCATCATACGATCCTGTAGAAATAATGTTCGGGTAATATTCTCTTGATGTATCTAGGTTATGGGTATAAGCTGTAAGTC | |||||||||
gi|21163686|gb|BJ485243.1|BJ485243 BJ485243 K. Sato unpublished cDNA library, strain H602 adult, heading stage top three leaves TTTATACTCCCTCCGTCCCAA EST sequence (targeted fragment marked with yellow): TAATTCCGGATGGAGGGAGTATATAACATATTAATTGCCAGCTTGTTGCTGTAGGTCCTCAACTAAGAAAAAAAAACATCAACTAAGAAAAAAAAACATCAACTAAGAAAAAAAACATGTTGACAACCTGAAGAGAGGAGCAACACCTGCAATTGCCGCCATATAAAGGTGGTTTCCTATAAATGAATCGGAAAGGGAACATAGTATGCAAGATAAAATAGATACAACAAAAGGTCAAATTGGAAAGGGATCTTATTGTCGGAGAAGTTTAAAAGATGAAAATGAAGAGAAAATTACCGCATATATTAGACCTGTTAATGGAAAAAGGTGCAGCTCGGTGCACGTAACTCCTGCACAAGCGGGAGCTACATGCACCGGGCTGCCCCCCTCTATTTGAGGTTTGGGATTGGGCAGTGATGAGCTTGTCTCTCATATCATTTTTCTCTTGTCTACATTTAACTTGATGTATGGAAGAATTTCTTATCTCAGTGATACCAATCTATCAATATGTCCATGCAGTTGTAGCTCTATTATTTTCCTTCTCTATGTAGTTTCTTTGTACNTTTCATATG | |||||||||
gi|161423168|gb|EX591855.1|EX591855 HDP04C10w HDP Hordeum vulgare subsp. vulgare cDNA clone HDP04C10, mRNA sequence TTTATACTCCCTCCGTCCCAA EST sequence (targeted fragment marked with yellow): GGGTGAAGGGGTGAACATTTCAGCGAACACGGTACATCCCGGGATCATCGCCACAAGCCTTTTCAGGAACAGGACTATTGTGAGCGTGTCGTTGGTCTAGTATAAAATTTGTACTAACTTAGTACAAATTTTGCGACACTTATTATTCTGGGACGGAGGGAGTATAACCTTACTGCATGTATGCCATTGCAGCTCTGATGAATACTGTTGGAAGAATCATAAGCAGGAGCATCGAACAGGGTGCTGCAACAACATGTTATGTGGCGATGCACCCTCAAGTCCAGGGGATAACTGGTAAATACTTCGGCAATTGTAATATAGCAAACCCAAGCTCGCAAGCTGTAGATGCAGAGTTGGCCAAGAAGCTGTGGAACTTCAGCTTGCAGGTAGTGTCTTCTTGATATGCCGGTTTCAGATAAATAGATTGTTCCGTGTACACTCTAATTTCTGCTACTTCTACATTCAGTTACTTCAGAGCAAGACAGGAGCATGGCTACTGTCAGTTGTAATTATCAATTTCTCTTGGTATTATTTTTGG | |||||||||
gi|161444502|gb|EX585261.1|EX585261 HDP36H16T HDP Hordeum vulgare subsp. vulgare cDNA clone HDP36H16, mRNA sequence TTTATACTCCCTCCGTCCCAA EST sequence (targeted fragment marked with yellow): ATATTTAGAAACGGAGGGAGTATTTAGGAACGGAGGGAGTACAAAATATCATGATCCCTACAGTACAAAGCTCTAGCTGGAGATAATGGTGCCAGTTTTGCACCGGATGTGGTCTCGAGAATCTATACCAACATTTTACATCGAAGCGGCTTGCTCACATCTCTCCGTGGATGATGCCACGGTGGCCTCCTCATCGCCAAAGTTCGGTGCCTTGGGAATCAGGCCAAGGATCTTGAACATTGCCTGGTCCGCATCAAAGTCGTTGTTTGCAGTTGTCAGGAGCTTTTCACCGGCGAAGATCGAGTTGGCCCCAGCAAGAAAGCAGAGAGCTTGCTCTGGCATGGAGAACCGTACTCGCCCTGCCGAAAGTCTCACCATTGCCTTTGGCATCACAATCCGAGCGCTGGCAATCATGCGGATCATTTCCCATATCTCTACAGGCTTCTGATCCTGAAGAGGTGTGCCTTTGACAGCAATCAATGCATTGATAGGAACACTCTCTGGGTGTGTTGGCAAAGTGGCCAGTGTATGCAACAGCCCTACACGGTCTTCCTCCGCCTCTCCAAGACCAATAATTCCACCTGAGCAGACGCTTATTCCAGCTTCACGGACATGCTGAAGAGTCTGTAATCTATCATCATACGATC | |||||||||
gi|21142833|gb|BJ464326.1|BJ464326 BJ464326 K. Sato unpublished cDNA library, cv. Haruna Nijo germination shoots Hordeum vulgare TTTATACTCCCTCCGTCCCAA |