miRNEST 2.0: an integrative microRNA resource miRNEST 2.0, an integrative microRNA resource :: Browse




mature miRNA: ACTCCCTCCGTCTCAAAATAA
species: Hordeum vulgare subsp. spontaneum
database: miRNEST
The numbers on the right side of the alignments show a score calculated for them.
When calculating the score, a mismatch is given a score of 1, bulge: 2, and wobble: 0.5.

Predicted miRNA targets
gi|21160752|gb|BJ482291.1|BJ482291 BJ482291 K. Sato unpublished cDNA library, strain H602 adult, heading stage top three leaves

ACTCCCTCCGTCTCAAAATAA
||||||||||| .| |||||
TGAGGGAGGCAAGGATTTATA

EST sequence (targeted fragment marked with yellow):
CCCTCCGTTCCTAAATATAAGTCTTTTTAGGAGGTTCCACTAGNATATATATATAGACATACTTTACAGTGTAGATTCATTCATTTTGCTTCGTATGTACTCCCTCTGTTCCTAAATATAAGTCCTTTAAAGATTCCACCAGGGNACTACATACGGAGCAAAATGAGTCAATCTACACTCTAAAGTATATCTTTGTACATCCGTATGTAGTTTGTAGTGTAATGTCTAAAAAGACATATATTTAGGAACGGAGGGAGTAGTATTTAGGAACGGAGGGAGTAGTTGCTAAAGGTCGTTTGCTATTTATAAGAGTTTTGCAGGTGGGCGCCTGTCAGACCGCTGTTAAAATCTAAAATGTGGAATTTTGTGATACCTTGCCTCCCTGAATGTGGAATTTTGTGAAACTATGTCTTAGTGTGGAGTTATGTGATAACTTATACAACAAATGTAGAGTTTTGTGAAATTGTACACCTTATAGTGTGGTACAAATTCAAAATTAGCAGCATTCTTTATTTGATTGTGCCAGCATCTCATCTCCGTACTGCCTAAAACATGTTTGTTTTGTCTTGATGCTTTAAGGGTCATGCTTGCAACCTCCATATTCTGCACATGCACTT



gi|18242882|gb|AV947085.1|AV947085 AV947085 K. Sato unpublished cDNA library, strain H602 adult, heading stage top three leaves

ACTCCCTCCGTCTCAAAATAA
||||||| ||| .||||||||
TGAGGGAAGCATGGTTTTATT

EST sequence (targeted fragment marked with yellow):
GCCTACTACAACCATGGAGGCATCCTGCCCTATGTAATCCGCAACATGGCAGGAGCTCAGAAATAGGCGAACGCGGCCACATACCCTTTTNGACNTAGATGGCGGCATGGCAGTCTTGTTAGTGCCACCGTGGACATCAAGAGTTTGCTCATTATGTTGTGGCCTTATGAATAAACCGAAAATAAAGCTGGCATTTCCATGCCTGGCGTGGGCGCAGGTCGACTTGGGGGGAGTTTGGTTGTGGTTATGAAACATGTGTTCATTTTGAACAAATCTTCAGTTGTGGTGGATTAAATTGGTAGAGCCTGGTTTACATTGCTTTGTGCTAAAAACAAATTTGAACTGGTAGCAATCTTGAGTATTTTTTTTAATCTTTTGCTCGACCAATCGACTGCCTGGTTTTGCATACCTGTAGTAACCTTTATTTACTAAAGTAAGTTACAAAATCAGGGTTCTCTTTGTTCCTTTCTATAAAGTGTATTTGTTTTTTAATAAAATTTTACTTCCTCTGCTAGTTCTCCTTAATTATAATTATTTTGGTACGAAGGGAGTACAATGTAAGGTGTGTTTCTTGTAAATCCTTNAATTTTTTTATAAGCCCTAAAAAAG



gi|18241224|gb|AV945427.1|AV945427 AV945427 K. Sato unpublished cDNA library, strain H602 adult, heading stage top three leaves

ACTCCCTCCGTCTCAAAATAA
||||||||||||.||||||||
TGAGGGAGGCAGGGTTTTATT

EST sequence (targeted fragment marked with yellow):
AAGCTGCAGTTCAGGTGGGCGCTTNTGCTCTCCCTCCACACGCCCTACATCCACGTACACTCTTCTATCGGTACCTACACATACATGCGCCAGGTGGCTGGATCTCGCAGGGGCGATGTTTTTACTCACATCTCATGATGCATGTCAAGCTATTTGGAGCTTGCTTGCATCATTAAATGAGCATGCACTAATTGGACACAAATAAAGGAGATGAGTACTAAATGAACTTGTACTAAACAGAAACAATTTATTTATGGTGTACTCCCTCCGTCCCAAAATAATTGTCTCAAGCTAAGTACAACTTTATACTAGAGGTAATACAAAGTTGAGACATTTATTTTGGGACGGAGGGAGTACATAATTATCAAGTTGAAAGCTGATCTATAAATAGCAAGTATTGTCGTGTGTAAACCTTTTACTTGGTTCGTCTTTTACAGGAGCTCCATGGCTAAGAAAGTTAAAAGTGCGAAAGTGTGAACCCGTGAAACCCTACTCAGCAAAGAGTTGTTTGTTCTATTTGAGTGTAACGGATAGTAAATATTGTAAGTTGGCATATCTGGGGTTGGGGTTGTAATAGACATCAACAATGAATAGACNATTTAGT



gi|18239427|gb|AV943630.1|AV943630 AV943630 K. Sato unpublished cDNA library, strain H602 adult, heading stage top three leaves

ACTCCCTCCGTCTCAAAATAA
|||||||| || .|||||||
TGAGGGAGACAAGGTTTTATC

EST sequence (targeted fragment marked with yellow):
GAACCAGACTCTGCTGAGCAGACTGTTCGGTGGTCCGTTGCGGCTTGTGGTGGTAGCGGACGAATCGGAAGGAGAGGAGGATGAGGATGATCTTCCTTAGAAGGAAGGAAGGAAGGAATAAGCTCAAGGGAGGGGAGGGTCTTATTTGATTTGATTTGATTTTCTGCACAAAAGAAACATGTGATAGTTACTGCTACATACTCCCACAACTTTGTACTAGAAAAGTTGAGACACCTATTTTGGAACAGAGGGAGTAGTAGTATAAGAAGAGTGGCTGTCTTTTGTTTGTGGTGCTGTGAGAGGAAAAAAAGAAGACTAAATTTTGATTGTGTTGTAACAGAAGACAGCACAATGAAACCAAGCTCACTTGACTTGTAATCAGATTCAGAATCAGATCAATGTAAAGAATGCCACTGTT



gi|21162646|gb|BJ484198.1|BJ484198 BJ484198 K. Sato unpublished cDNA library, strain H602 adult, heading stage top three leaves

ACTCCCTCCGTCTCAAAATAA
||||||||||||.||||||
TGAGGGAGGCAGGGTTTTAAA

EST sequence (targeted fragment marked with yellow):
TAGATTTGTTTACATGTAAGTGTATCTAGTCACGTTTTGGTATTTAGATACATCAACTTTTAGACAAACCTAAGACAAAAATTTTGGGACGGAGGGAGTAATATGATTGAAATTGTTGTTACATTGCCCTGCATGGATTTGGTGGCAAGACTAACTAAAATGCGGTATTTATTTTCTATGTCCTTGCATGAAGTTATCTCGATCTCAACATTCATGTCTCAGAATGCCCGAGGATAGTGCCGAGAAGACCAACATGGTGCGGGAGCCATCCAAGGATTTTAAGAACCTGAACTTGAAGTTGCTCCAGATGTCCGGGTTCGAGGAGGAAGACAATGTGACAACCTATATAAGGCTTGTCATGGAACGAGCTGTGGGGTTAAAGAAAATCGAGCTGCAAGGTTACCGCCCATTCTGGGCCTGCAATGCCACCGACGCTGATAGAAAATCCCAGGTGGATGAAGCTAGCAGGCGTCGGATTAAGGAGCTGCTCGCGAATGGATCCTCCTCATCTGTGGAGATAGTAATTTGTTGACAGGTATGGTCAAGGAATGTAAGTTTCAGAACGCTCGCAGCTGCTAGATTAATGACTTTGCACAGTCAATTGTAATTTCAGTTTCTAGTTATTGATAGCCCCAGAGTACTCAATTGCTATGGACCTCATACTGTAGCTAGATTATGTGTGTACT



gi|21158426|gb|BJ479954.1|BJ479954 BJ479954 K. Sato unpublished cDNA library, strain H602 adult, heading stage top three leaves

ACTCCCTCCGTCTCAAAATAA
||||||||||| .||||| |
TGAGGGAGGCAAGGTTTTCTC

EST sequence (targeted fragment marked with yellow):
AGGGGAGCTCTCGTTGCCTGATCGCTGACCCATCGTCCAATTGACCGCAGCGGCAGTTCCACACCGTCAAGGTGCTGCCAGCCACCGCCGTTTTATTGCCTTTGATTCGGCTGTGCGCGTGGGCTGGGAACCGTGCTCTGTTGTCTGATGCGTCGTTGGAGCGGGAGGTTTGGTCGGTCGAGGCCAGGTATGAGCAGCTCCTGAGCTGGCTGGATGGATGGATGCAGGTCATGTGTCGTGAACCAACACCAGGACACCTCTTTTGGAACGGAGGGAGTATATTTTGGAACGGAGGGAGTATGTATGTACGTATGGATATCATGGTCATGTTGCTTGGGGGTTCAACCTCTTTTTTGGATAAAGAAGAGGGGCGATGCCCATAATTATGACTGGCTGAAATAATCATGTCTTTGAGACATCAAGACAGCCGTGGCAAGGTGGGACTAAATAGTGTCTGAAAGTGGGTATCTGCGTTGGAGTTG



gi|21164539|gb|BJ486097.1|BJ486097 BJ486097 K. Sato unpublished cDNA library, strain H602 adult, heading stage top three leaves

ACTCCCTCCGTCTCAAAATAA
||||||||||||.|| || ||
TGAGGGAGGCAGGGTATT-TT

EST sequence (targeted fragment marked with yellow):
GAGAATATTGGTTCAGAGATTAAGAACATCAAAGAATTGGTCTGGGGACTGGATGAGAAGATGGATTCAATGGAAGCCAAACAGAATTTTTCATGCGCTGGTGTGATGTACCTCTGCCAATTCATAGAGCAAAGTGGTGGGAAGCTCCCTGAACGCCTGGAAGGCATCAAACCATCAGCGAAGCGATTTTCAACAATTGGCATACAGGGGTTGCAACTAGCCATAGAAACAGGGGATTATCGTGAATTCAGCAATGCTGATTCCACTGACAAGATAAGCAGGTCGAACTCGTTGAAGTCTGCCAACTAATTTTCTTTGGGGTTGGCGAGACGAATATCCAGATTTGTTGCTCAGTGGAACATTGTAAAGGGAGATCCTTGCTGGTTAAAATGTGAAGTGTCCCAGCCTTTTTGTTATTTGCTTGCAGGAAGTGCTGTTTTTTAAACTTGAAAACGTGTGCCAAGTGCTCCCCCCGTCCTGTAATATAAGAGAGCTTCTGACACTAACGCTCTTATTTTATGGGACTTTTATGGGACGGAGGGAGTAGTATCTACTAGGGAATCTAGACCAGAGAGTATTCTGGCATCACTTGTGCCTTGCATTTTTAGGCAATACCTAGCTATAAATAAATGTAACACTTGAGATTCGTTGAACCATTTCATTTATGGGTCTGTAAATCTTGCTGTTTGTGCATTCTGTTTTGAGGATTGCTTCATACAATAAAATGCTGTCGTGTCCCACNT



gi|21160867|gb|BJ482407.1|BJ482407 BJ482407 K. Sato unpublished cDNA library, strain H602 adult, heading stage top three leaves

ACTCCCTCCGTCTCAAAATAA
|||||||||||||||||||||
TGAGGGAGGCAGAGTTTTATT

EST sequence (targeted fragment marked with yellow):
CATGAACTAATGTTGTGTGGTATTATTTAGGGCTTGTGTCTTCAAAAANAAAAGAAAAAAGTTAGGGGTTATGTTGGATTGTAGCACAATTTTGTCTATGAGACTGTCATTTTTCAAGTACTTGAGCTGTAGGAATCTCCATGGCATGTATTCCCTCCGTCCCAAATAAGTGACTCAACTTTATACTAAACTTAATATAAAATTAAATCATTTATTTTGAGACGGAGGGAGTAGTAGTGAGCTAAACGCTCTTATATTTCTTTAT



gi|21161007|gb|BJ482549.1|BJ482549 BJ482549 K. Sato unpublished cDNA library, strain H602 adult, heading stage top three leaves

ACTCCCTCCGTCTCAAAATAA
||||||||||||.|| ||||
TGAGGGAGGCAGGGTATTATA

EST sequence (targeted fragment marked with yellow):
ATCTAGGCATGTGATCTGCAGGTACTCCCTCCGTCCCATAATATAAGGCGTTATTACATCCAATATACTCACATATTATGGGACGGAGGGAGTATCTAGTTGCTTCCTTTTGAATTAAAACTTTTTAACAACTAGAGCCGCTCTCTTCATCTCCTGAATACTCTTATGGGTGCATCATACCTGAAACCTCTCGTCTTTCAGGTTTTCCAGTTGCAAGTCGATAATGGTATCCCGATAAAGAGCTGGTTTGATGACCCCGCGGACCAGGAATTGGTTGAGTTACTCCCGTTCCTCGAGACCCTTGTTGATGCAGAGGACGTAAGGCCACTAATCTCAAAGACTTTTCACGGCACAATCCAGCAGGATTAGACTTAAGATGCATCCTTATCATGCACTGAGCCTGAGCTTGCCAGTTCCAGCGAGCTCCATCTTGGGAAATTAGGTATTAGGATCAGCATTCACCATTTATGTTATGTTGGCTGTTACAAATAGCAAGCATAAACTGCATGTCGCCATGGCTTGTATATGTAGTATTGTTCGGTTTTCTGTGTCGCAGGTCTTTGTACATAAACTATAGTAT



gi|21160752|gb|BJ482291.1|BJ482291 BJ482291 K. Sato unpublished cDNA library, strain H602 adult, heading stage top three leaves

ACTCCCTCCGTCTCAAAATAA
||||||||||| .| |||||
TGAGGGAGGCAAGGATTTATG

EST sequence (targeted fragment marked with yellow):
CCCTCCGTTCCTAAATATAAGTCTTTTTAGGAGGTTCCACTAGNATATATATATAGACATACTTTACAGTGTAGATTCATTCATTTTGCTTCGTATGTACTCCCTCTGTTCCTAAATATAAGTCCTTTAAAGATTCCACCAGGGNACTACATACGGAGCAAAATGAGTCAATCTACACTCTAAAGTATATCTTTGTACATCCGTATGTAGTTTGTAGTGTAATGTCTAAAAAGACATATATTTAGGAACGGAGGGAGTAGTATTTAGGAACGGAGGGAGTAGTTGCTAAAGGTCGTTTGCTATTTATAAGAGTTTTGCAGGTGGGCGCCTGTCAGACCGCTGTTAAAATCTAAAATGTGGAATTTTGTGATACCTTGCCTCCCTGAATGTGGAATTTTGTGAAACTATGTCTTAGTGTGGAGTTATGTGATAACTTATACAACAAATGTAGAGTTTTGTGAAATTGTACACCTTATAGTGTGGTACAAATTCAAAATTAGCAGCATTCTTTATTTGATTGTGCCAGCATCTCATCTCCGTACTGCCTAAAACATGTTTGTTTTGTCTTGATGCTTTAAGGGTCATGCTTGCAACCTCCATATTCTGCACATGCACTT



gi|18239961|gb|AV944164.1|AV944164 AV944164 K. Sato unpublished cDNA library, strain H602 adult, heading stage top three leaves

ACTCCCTCCGTCTCAAAATAA
||||||||||||.||||||||
TGAGGGAGGCAGGGTTTTATT

EST sequence (targeted fragment marked with yellow):
GCGTTCTAAGTTCCTGGTATACAAGCGCTGAGATTCTCAACTTTTGTGCTATTGTAATACTGATATTACCTTCTGCTGGAAAGTATTATTAAGTCAATGTTCTGGGAGAAGACGTTGAGTCAACTAGTTTGGTAATTTACCTGGCTAAGATGCAAAAGAGGGCATTTTGGATGCCTATAGTGGAAAAAGAACTGAGAAAAATCGTCTCGACGGGTTGTGTCAAGCAAGGAAGGTGTGACAACAAACACGCATTTTGATATTCTGGCAGTCTTTTGTAGTGTAATTTAGTACTTCCTCTGTCCCAAAATAACTGTCTCAAGCTTAATACAAATTTGTATTAAAGCTAGTATAAATTAAGACACTTATTTTGGGACGGAGGGAGTATCTAAGAGTATATTCTCGGTCCCTAGTAGTGATGTTCTAGATAGGACCAGTGGGGAAGCTACAAGATGTAATTTCCACTAGTGGGGAAGCTAGGAGATGTTCTAGATAGGATTTGGGGCTAACTACGTTTTTTTAAGGTGTAATTTCCACTAGTGAGCAATGAGAAAGACTAGATCACTGAAGGATGTATGGATTCGNATTGGGACCGAATAGNATGTAT



gi|21158426|gb|BJ479954.1|BJ479954 BJ479954 K. Sato unpublished cDNA library, strain H602 adult, heading stage top three leaves

ACTCCCTCCGTCTCAAAATAA
||||||||||| .|||||||
TGAGGGAGGCAAGGTTTTATA

EST sequence (targeted fragment marked with yellow):
AGGGGAGCTCTCGTTGCCTGATCGCTGACCCATCGTCCAATTGACCGCAGCGGCAGTTCCACACCGTCAAGGTGCTGCCAGCCACCGCCGTTTTATTGCCTTTGATTCGGCTGTGCGCGTGGGCTGGGAACCGTGCTCTGTTGTCTGATGCGTCGTTGGAGCGGGAGGTTTGGTCGGTCGAGGCCAGGTATGAGCAGCTCCTGAGCTGGCTGGATGGATGGATGCAGGTCATGTGTCGTGAACCAACACCAGGACACCTCTTTTGGAACGGAGGGAGTATATTTTGGAACGGAGGGAGTATGTATGTACGTATGGATATCATGGTCATGTTGCTTGGGGGTTCAACCTCTTTTTTGGATAAAGAAGAGGGGCGATGCCCATAATTATGACTGGCTGAAATAATCATGTCTTTGAGACATCAAGACAGCCGTGGCAAGGTGGGACTAAATAGTGTCTGAAAGTGGGTATCTGCGTTGGAGTTG



gi|21164188|gb|BJ485746.1|BJ485746 BJ485746 K. Sato unpublished cDNA library, strain H602 adult, heading stage top three leaves

ACTCCCTCCGTCTCAAAATAA
||| ||||||||.||||||||
TGAAGGAGGCAGGGTTTTATT

EST sequence (targeted fragment marked with yellow):
CAATTCATGAAAAATGCTTGAAAGAAATGAAGGAGCATTGCCAATTCGCATGCCCGCTCTGCTCCAAGTCGGTGTGTGACATGTCAAAGGCATGGGAAAGACTGGATGCAGAACTAGCGACTCTGTCAAACTCCTTCGACGATAAGATGGTTCGCATATTGTGCAATGATTGCGGGGCGGTATCAGAGGTGCAGTTCCACTTAATTGCACATAAGTGCCATAGTTGCAAGTCATACAACACCCGGCAAATTTGAAGTAGTGAGCCATGGAGGGACTCTACGTTCTTCCTAGAAGTTGGCGAGCGCGCTCCAGCAGTGGAAATCGATTCATCTACGTGATGTTTTCCACGAAGGCAGATCACTGGACAGTTTATCTGCATCCTCCGCAGTTAGCTGCTGCCTTTTGTTTGTCCTTCATTTGTTTCTGCATGGTCTCCTTTTGTTCAGTGTGTAACAGCTTCCGCGTGACCGATCAAGCCTTGCATATTTTAGCACAACGCGGCATCTGGTAGAATTGTGTTCTACTCCCTCCATCTCAAAGTAAGTGACTCAAAAATGACTCTTCTCTTGAGTCATTTTTGAGTCACTTATTTTGGGACGGAGGAAGTACTCGATTGGTATCATTTCCAGCATTGGTCAGGACTGCAACCTATAGGATCACCACTCTGGCGAGTCNTGCTGCGTGCATGCAGCAGGCTGTGGGCATAGGGTTTAGGTTGCAAAATTTCTNATTCTCAATTTAAAT



gi|21160581|gb|BJ482119.1|BJ482119 BJ482119 K. Sato unpublished cDNA library, strain H602 adult, heading stage top three leaves

ACTCCCTCCGTCTCAAAATAA
||||||||||||. |||||
TGAGGGAGGCAGGCCTTTATG

EST sequence (targeted fragment marked with yellow):
ATTCGGCACGAGGTGTTTTTCTCCTCTGTGAAGAGAAGCCCAACCTGATAACTATCAAATGTAATATCTTCCACTTGGAATTCAGGCAGAGGTAAGCCTACTGCGACATTTATGTTACTAAAAACACATAATTGAACGCATTGACACTAATACGCCCTCCGTCCGAAAATACTTGTCCTAGAGATGAATGTATCTAGACTTATTTTAGTTATAGATACATTCATTATGTTTATTTTTAAGACAAGTATTTCCGGACGGAGGGAGTATGATTTTTTGGGTCTATGTGCCATATGCCACCTGCAGGATCTATCCACACCATGGCACAAAGCTGGTACAACCTTGAGATCTTTCTCTATCTTTCCTTTTCTCCTTCCGAGAAACGTAGTCTTGAGATCTTTTCAGATAGTGGACACATGCAAATAGTTACATATACAAGTCCAAGTTCTAGCAAAGTTGAAACACCAGTTTGTGGTTTTTGTGCCAAAACCAAAGGTGTCATCACAAACAGATAATAATAACAATATATATTAGGTAAGCAAGTTGCACAAGTGGGCCTTTTTATATTCCCACCCAGCAGATTGGTTTCTTCCCTAGCCAATCAAGCTTGACAGTGTAGCTTGCCTATCAGAACACTTTGGATTGCATATTTACATTATTTCTTATACCACTTGATCTTTTAATTTTCTCCTGATGTTACCTGTAATATCTTTG



gi|14526867|gb|AV834778.1|AV834778 AV834778 K. Sato unpublished cDNA library: Hordeum vulgare subsp. spontaneum top three leaves

ACTCCCTCCGTCTCAAAATAA
||||||||||| .| |||||
TGAGGGAGGCAAGGATTTATG

EST sequence (targeted fragment marked with yellow):
GCGACAAGTAATTCCAGACGGAGGGAGTATTTAGGAACGGAGGGAGTAGATTGTACGAATATTTCATATCGCTCATTGATTTGAAATCTTCGTACTTCTAATGCTGGAAATATCATGGGAGAGTATCACGGCTTCACACTAGTTATCAGTTNCACTATCTAAATCAACATGGAAAGGCCCATCAATATTCCTTGTCATACCATGATTGCTAGATNGTNTCATGGAAAAGGATTTCATATTAGCATATCGCTCATTGATTTGAAATCTTCGNACTTCTAATGCTGGAAATTTCATG



gi|14527271|gb|AV835182.1|AV835182 AV835182 K. Sato unpublished cDNA library: Hordeum vulgare subsp. spontaneum top three leaves

ACTCCCTCCGTCTCAAAATAA
|||||| |||||.||||||
TGAGGGTGGCAGGGTTTTAAG

EST sequence (targeted fragment marked with yellow):
CAGCAACTATTCAATCTTTGAGATCTCAGCTTCCTCTTCCTTTTCCTGCTTCGGCAATGCCTCCAGGGGCCGCAACCCTCATGCTGCTGCTACTGCTCGTGTAGGGGAGAGGAGGCCATGGCGCCATCACCATTGGCAGCCTAGACATGGACATGTCCATGGGGGTGGAGGCAGTGTAGATGGGCTCGGAGCCTGCGGCGCACGGGCAGCTGCTATGGGAGGCCGACGGCGGCGGCCGGAGGTACATTAGCTACGACGCGCTGCGGGGGGACGCCGTGCCGTGCTCCAGGCCCGGGGTGCCCTACTACAACTGTCGGGTCAGCACCACCACTAACCCCTACACCCGCTGCTGTGATTCCATCACCCACTGCCGCGACGACGACTCTTCCTAGGTGCTCCCTCCGTCCCAAAATTCTTGTCTTAAATTTACATATAAATATATCTAGTCACGTTTTAGTATTTACATACATTCATTTTTAGATAAACTTAAGACAAGAATTTTGGGACGGTGGGAGTACGTAACAAGTAATTGGCGATTAAAATTGCTGGATCCAGAGAGAGGGTGTTGCTACTCATTTTGTGTGTGCTTTAGTTTTTGG



gi|21164201|gb|BJ485759.1|BJ485759 BJ485759 K. Sato unpublished cDNA library, strain H602 adult, heading stage top three leaves

ACTCCCTCCGTCTCAAAATAA
|||||||| |||.||||||||
TGAGGGAGACAGGGTTTTATT

EST sequence (targeted fragment marked with yellow):
CGTAGTACACCTCCTGCATCGAAATCCAAGCAAAAGAGGAAATCAGGTGGTGATGATGCCAAATCATCTAGTGGTGCAGCTTCAAAGAAAGCAAAGGTGGAATCTGATACAAAAACATCAAGTATCAAAGACGAGACACCGGCTTCATCAAAACCTACACCAAAGGCCTGTGCTTCATTGAAAAGTGCCAATGTATCTCCTGTGACAGAGGATGAGATCAGGACTGTTCTTCTTGCAGTGGCTCCTGTCACCACACAAGATTTAGTGTCCAGATTTAAGTCTAGACTACGAGGTCCAGAGGACAAGAATGCCTTCGCTGAAATTCTGAAGAAAATTTCAAAGATACAGAAGACAAACGGCCACAACTATGTCGTCCTTAGAGAGGATAAGAAATGATGGGCTCTAAAGTGGTGATTTTCTTCATTGCGAAGTTTCCTCATGTCTTTCTCTGGAGATAATAGTTTTGTACTCCCTCCGTATCAAAATAAGTGTCGCTGATTTAGTATAAAATTTGTACTAATTTAGTTATAAATTTGTGACACTTATTTTGGGACAGAGGGAGTATGCCGAACTTCTACTGCAGCTTGCTTCTAGTAGAAATCAAATAATGATAGGTGCAATGTTGTCATTTCCTGGTGTCATTCTAGAAGAAGTTGCAAGGTTATGATGATGTGTGAGAACAGGTATATTGATGCCAAGACCGTGGTCTCTCTAAACCTANAATCCAAAGNAGTAAAANCTAGAACGA



gi|21158003|gb|BJ479525.1|BJ479525 BJ479525 K. Sato unpublished cDNA library, strain H602 adult, heading stage top three leaves

ACTCCCTCCGTCTCAAAATAA
||||||||||||. |||||
TGAGGGAGGCAGGCCTTTATG

EST sequence (targeted fragment marked with yellow):
AATGACTGGTCTGTATGTTTACATCCTACGTATTCGTCTCCACTGTCTGTATGCAAGTCCTTTTGTAATACTCCCTCTGTTCATAAATACTTGTCCTAGAAATAGATGTATCTAGATTTATTTTAGTTATGGAGATACGTCCATTTTGTACATTTCTAGAACAAACATTTCTAGAACAAGTATTTCCGGACGGAGGGAGTACTATATAAGCATCGACGACAATCAGCTCTCCATCTCAACAACAATCTTACCAGTGGCATGGCCATCGATACTGCTTTGCCACGCCTTGCCTGCGTCGCTCAAGGGGAACCTCGAGTCGATCACCGTCTTCAGCTTGCCTTCCTTGAGCAGCCCGACCAAGAACTCCAGGTCCGCCTTGTTGGGCGACAGGAGCAGGGGCACGAGGCGCTTCTTGGAGAACGTCACCCAGTGCAGCGCAGATGTGAGGATGGCCGAGAAATTGGGGGTGATGTCGATAACTCTCCCGGCGTCAGTCAGCAATGGCTGGAAAGACGACCAGCTGACACCGACGGTGCAGTGAACCACGCCGTCGTAC



gi|14526800|gb|AV834711.1|AV834711 AV834711 K. Sato unpublished cDNA library: Hordeum vulgare subsp. spontaneum top three leaves

ACTCCCTCCGTCTCAAAATAA
||||||||||||.||||||||
TGAGGGAGGCAGGGTTTTATT

EST sequence (targeted fragment marked with yellow):
GNAATTCGGCACGAGGGTTTATTGTATACTCCCTCCCGTGCCCAAAATAAGTGAGTCACTTATTTTGGGACGGAGGGAGTATTAGATTGTAAAAAACCTCTAAGTTAGTAAACTAGATCTGTCCAGTTTTAGGAAATTTGTAAATACAGTGTGCCTTGGTAAAAAAACACACTTCTTTAAAAAACTGGAAATCATATTCTTATCACCAATCTTTTTTCATTTATATTCATATATTNNTCTGCATATCTTACTTGCTCTCTCAGCTACAGGGTTATTCATGTTTCTTCTACTCGCGTTTGTTTCTGACGGCAACAGAGGCAAAGGAACATACATACTCAGGGTAGTCCCGACTGATGCTTTTCATGCAGATAAAACAGTACGGATAGCTGACCAGAAGTGAACATGGAACCTCTTGAATTATTGCGGAAAGGTGTGATTTGGGAGAATATATGTTGATCAGAATAGGTTTTGTGAACGTCTGTAGGTCATGCACGTATGCAGAGAATTGATTC



gi|14527897|gb|AV835808.1|AV835808 AV835808 K. Sato unpublished cDNA library: Hordeum vulgare subsp. spontaneum top three leaves

ACTCCCTCCGTCTCAAAATAA
||||||||||||.||||||||
TGAGGGAGGCAGGGTTTTATT

EST sequence (targeted fragment marked with yellow):
TTCAATAGCAGNNTCAAATTAGNATGGTCATGTACATATTACATGGTACTCCCTCCGTCTTAAAATAATTGTCTCAACTTTGTACTAGCTTTAGTATAAAATTGTACTAAGGTTAAGACACTTATTTTGGGACGGAGGGAGTACATATAAGGCTCAACCAGNATTAATTTAGGGGAGGGGGGAGAGGACTGTACAATTTCTGACAAAATTGGAGATGAACATATCTCCTGATCACAAACTCACCCTGACGTCCGTCAGAAAGATGAAAACCTCAATGCTGGTAAGGCCTCAAAGTTTCTCTAGTTCACGTTCCATCGAAGCGAAGTCAAAACCTTCCCAATCAAGTCCTACATCCAACTCAAACATTGGCAACGGTAGATGGCTGATGTCTGCCAGCCCGATGTAGTCGTCGCCAGGCGGTTTGCCTGTTGTGTCAACGAAGTCATTGACATGAAACATATCTGCCAGCCTTGAAATATCATCCAGTGAGAGTTTGTCAGTTGTGCAAACATAGTCACTGATAGGAAGCTCATTTATCTGGCTGTGGAATGCATCCACTGGAATTTCTTCATCGCTAGGTGTCGATGAGCAGTGCACTAAGCTTTCATCAACATTCATCCGGCCAAGGAATGCATCTACCTCAATTTCTTTACCTGGCAGTTCTGGTGAGCAATGCAGTAAGCTCTCATCAGCAGTGTCAGGGTCTATCTCCATTGGCGCTACCTTG



gi|21160851|gb|BJ482391.1|BJ482391 BJ482391 K. Sato unpublished cDNA library, strain H602 adult, heading stage top three leaves

ACTCCCTCCGTCTCAAAATAA
|||| |||||||. |||||||
TGAGAGAGGCAGGATTTTATT

EST sequence (targeted fragment marked with yellow):
TGATCCGTCGAGGTTTGCAGATGGCAAGAGCCATCACCTTGGTGCATACTTCCCCTTTGGGATTGGCCCTGCCATCTGTGTTGGGCAGAATCTCGCGATTGTTGAGGCGAAGGTGGCGCTTGCAATGGTCCTCCAGCGGTTTGCGTTTGATGTCTCGCCGTCCTATGTTCATGCGCCCATGATGGCGATGACCCTCCATCCCCAGTATGGTGCTCAACTTCTTGTCCACAAGATCTGAGGCTTGTGTGGTGCCTGACTTATATGGAATTAGGAGGCGTGACAGCAAGGTACTCCTCGGTCTCAAAATAAGTGTCTCAACCATAATATAACTTTGTATTAAAGCTGATAAAAAATTAAGACACTTATTTTAGGACGGAGAGAGTATATGTGAACGCGATGTCTCCGTGTCTCCTGCATNCCGTGTGGATTTTGAGCGACTTGTAATAAGAGGTTGCTAACTTGTCTGAAGTTTGTCATGAAAATGTGTATAGAAATTGTAACTNCNCGAAGGCCAGTGTGTATAGAAACT