miRNEST 2.0: an integrative microRNA resource miRNEST 2.0, an integrative microRNA resource :: Browse




mature miRNA: ATACTCTCTCCGTCCTAAAAT
species: Hordeum vulgare subsp. spontaneum
database: miRNEST
The numbers on the right side of the alignments show a score calculated for them.
When calculating the score, a mismatch is given a score of 1, bulge: 2, and wobble: 0.5.

Predicted miRNA targets
gi|21162646|gb|BJ484198.1|BJ484198 BJ484198 K. Sato unpublished cDNA library, strain H602 adult, heading stage top three leaves

ATACTCTCTCCGTCCTAAAAT
|||||.||||||||.|||||
AATGAGGGAGGCAGGGTTTTA

EST sequence (targeted fragment marked with yellow):
TAGATTTGTTTACATGTAAGTGTATCTAGTCACGTTTTGGTATTTAGATACATCAACTTTTAGACAAACCTAAGACAAAAATTTTGGGACGGAGGGAGTAATATGATTGAAATTGTTGTTACATTGCCCTGCATGGATTTGGTGGCAAGACTAACTAAAATGCGGTATTTATTTTCTATGTCCTTGCATGAAGTTATCTCGATCTCAACATTCATGTCTCAGAATGCCCGAGGATAGTGCCGAGAAGACCAACATGGTGCGGGAGCCATCCAAGGATTTTAAGAACCTGAACTTGAAGTTGCTCCAGATGTCCGGGTTCGAGGAGGAAGACAATGTGACAACCTATATAAGGCTTGTCATGGAACGAGCTGTGGGGTTAAAGAAAATCGAGCTGCAAGGTTACCGCCCATTCTGGGCCTGCAATGCCACCGACGCTGATAGAAAATCCCAGGTGGATGAAGCTAGCAGGCGTCGGATTAAGGAGCTGCTCGCGAATGGATCCTCCTCATCTGTGGAGATAGTAATTTGTTGACAGGTATGGTCAAGGAATGTAAGTTTCAGAACGCTCGCAGCTGCTAGATTAATGACTTTGCACAGTCAATTGTAATTTCAGTTTCTAGTTATTGATAGCCCCAGAGTACTCAATTGCTATGGACCTCATACTGTAGCTAGATTATGTGTGTACT



gi|18239961|gb|AV944164.1|AV944164 AV944164 K. Sato unpublished cDNA library, strain H602 adult, heading stage top three leaves

ATACTCTCTCCGTCCTAAAAT
||||||.||||||||.|||||
TATGAGGGAGGCAGGGTTTTA

EST sequence (targeted fragment marked with yellow):
GCGTTCTAAGTTCCTGGTATACAAGCGCTGAGATTCTCAACTTTTGTGCTATTGTAATACTGATATTACCTTCTGCTGGAAAGTATTATTAAGTCAATGTTCTGGGAGAAGACGTTGAGTCAACTAGTTTGGTAATTTACCTGGCTAAGATGCAAAAGAGGGCATTTTGGATGCCTATAGTGGAAAAAGAACTGAGAAAAATCGTCTCGACGGGTTGTGTCAAGCAAGGAAGGTGTGACAACAAACACGCATTTTGATATTCTGGCAGTCTTTTGTAGTGTAATTTAGTACTTCCTCTGTCCCAAAATAACTGTCTCAAGCTTAATACAAATTTGTATTAAAGCTAGTATAAATTAAGACACTTATTTTGGGACGGAGGGAGTATCTAAGAGTATATTCTCGGTCCCTAGTAGTGATGTTCTAGATAGGACCAGTGGGGAAGCTACAAGATGTAATTTCCACTAGTGGGGAAGCTAGGAGATGTTCTAGATAGGATTTGGGGCTAACTACGTTTTTTTAAGGTGTAATTTCCACTAGTGAGCAATGAGAAAGACTAGATCACTGAAGGATGTATGGATTCGNATTGGGACCGAATAGNATGTAT



gi|24970290|gb|BJ551839.1|BJ551839 BJ551839 K. Sato unpublished cDNA library, strain H602 adult, heading stage top three leaves

ATACTCTCTCCGTCCTAAAAT
||||| |||||||| .|||||
TATGAAAGAGGCAGAGTTTTA

EST sequence (targeted fragment marked with yellow):
CGGACCCCCATGTCACCAAGAAGTACGGCCTGTCACCGGACAAGGAGACGCTGGAGATCCTGGCCCAAGTGGCGCATCAGAGCGGGGTTGAGGTCTTTGTGAAGATATTCTATGGCGACCCGACCAAGAAGCTGTGCGAGGCAGTTGACCTGGTTCCTCTCGGCTGCCTGGTCATCGGAAGCAGAGGTCTGAGCACGCTCAAGAGGGCTCTGATGGGGAGCGTGAGCACCTACGTTGTTAACCACGCGGCCTGCCCGGTCACGGTCGTGAAGGAGAACATGTAGCTGCAGCTTGCTACCGATGTATGATGATACATACAAGAAGATAATACCGTCTGCAAGAACAGTAGTAGTAGCAAAGCAACGTGTAACCAGTAACAATAACATGACAAAAAAAGTGTGCTCGGACGGTGGTGTGTTAAGGGCCGAGTGTGCTTTGTACTTCGCTTCTAGTAACAGATACTCCCTCCGTCCTAAAATTCTTGTCTTAGATTTGTCTAGATATGAATATCAAGTATTTTGATACATTCATTTCTAGATAAACCTAATACAAGAATTTTGAGACGGAGAAAGTATTATATTTTATAGCAGTACCGG



gi|21162850|gb|BJ484403.1|BJ484403 BJ484403 K. Sato unpublished cDNA library, strain H602 adult, heading stage top three leaves

ATACTCTCTCCGTCCTAAAAT
|||||.||||.|| ||||||
GATGAGGGAGGTAGAATTTTA

EST sequence (targeted fragment marked with yellow):
GGGCACGNAGGCATGTCGCACTTGTGTGCGATAGTTCTACGATTTGCAACAAATGAGTTCCTGGCCAGGCTCCTTCGCCATATCCGTCAGCATGGCCAAGTAAGGCATGTTGAACCTGGTTCCTACGGTGGCGATTATGGCCTTGGCTTCAGCCCACCTGCCTTGCCTTCCATCAGTTAGTGCTCCGTTCACTCGGCAACAAATCGGCAATCCTAAAGTGTTCTGTTTCTCCATGCATGTATGTCACTGCAGTTCTTGAGTGGTAAAACTAGGAGGTCCATCATGTACTACGGTTCTGAGGGCTGGTACTTTTGGGGTATCTGAGATGGCTCGATTGGCTGTCCTGAATGAACTGTGTGGCAGACCAAGTTGTTTATCATGCGGTTTTTGCGTTTAGCAGCAAAAACCGTTAACTGTCCTGGGTTTATGTAACATATGATACTCCCTCCGTTTCAAAATAAGTGTCACAAATTCAATACTAAATTAGTATAAATTTTGTACTAGATCAACGGCATTTATTTTAAGATGGAGGGAGTAGTACTTACCTGACGAGGNGAATATTATCG



gi|21160851|gb|BJ482391.1|BJ482391 BJ482391 K. Sato unpublished cDNA library, strain H602 adult, heading stage top three leaves

ATACTCTCTCCGTCCTAAAAT
|||||||||||||||||||||
TATGAGAGAGGCAGGATTTTA

EST sequence (targeted fragment marked with yellow):
TGATCCGTCGAGGTTTGCAGATGGCAAGAGCCATCACCTTGGTGCATACTTCCCCTTTGGGATTGGCCCTGCCATCTGTGTTGGGCAGAATCTCGCGATTGTTGAGGCGAAGGTGGCGCTTGCAATGGTCCTCCAGCGGTTTGCGTTTGATGTCTCGCCGTCCTATGTTCATGCGCCCATGATGGCGATGACCCTCCATCCCCAGTATGGTGCTCAACTTCTTGTCCACAAGATCTGAGGCTTGTGTGGTGCCTGACTTATATGGAATTAGGAGGCGTGACAGCAAGGTACTCCTCGGTCTCAAAATAAGTGTCTCAACCATAATATAACTTTGTATTAAAGCTGATAAAAAATTAAGACACTTATTTTAGGACGGAGAGAGTATATGTGAACGCGATGTCTCCGTGTCTCCTGCATNCCGTGTGGATTTTGAGCGACTTGTAATAAGAGGTTGCTAACTTGTCTGAAGTTTGTCATGAAAATGTGTATAGAAATTGTAACTNCNCGAAGGCCAGTGTGTATAGAAACT



gi|18238941|gb|AV943144.1|AV943144 AV943144 K. Sato unpublished cDNA library, strain H602 adult, heading stage top three leaves

ATACTCTCTCCGTCCTAAAAT
||||| |||||||| .|||||
TATGAAAGAGGCAGAGTTTTA

EST sequence (targeted fragment marked with yellow):
ATGAGCAAGGAGCGATGCATCTCTGGGAACAGAGTGGTTCACCGCTCATCCCTCTGGTAGAGTTCTCGGACCCCCATGTCACCAAGAAGTACGGCCTGTCACCGGACAAGGAGACGCTGGAGATCCTGGCCCAAGTGGCGCATCAGAGCGGGGTTGAGGTCTTTGTGAAGATATTCTATGGCGACCCGACCAAGAAGCTGTGCGAGGCAGTTGACCTGGTTCCTCTCGGCTGCCTGGTCATCGGAAGCAGAGGTCTGAGCACGCTCAAGAGGGCTCTGATGGGGAGCGTGAGCACCTACGTTGTTAACCACGCGGCCTGCCCGGTCACGGTCGTGAAGGAGAACATGTAGCTGCAGCTTGCTACCGATGTATGATGATACATACAAGAAGATAATACCGTCTGCAAGAACAGTAGTAGTAGCAAAGCAACGTGTAACCAGTAACAATAACATGACAAAAAAAGTGTGCTCGGACGGTGGTGTGTTAAGGGCCGAGTGTGCTTTGTACTTCGCTTCTAGTAACAGATACTCCCTCCGTCCTAAAATTCTTGTCTTAGATTTGTCTAGATATGAATATCAAGTATTTTGATACATTCATTTCTAGATAAACCTAATACAAGAATTTTGAGACGGAGAAAGTATTATATTTTATAGCAGTACCG



gi|14526800|gb|AV834711.1|AV834711 AV834711 K. Sato unpublished cDNA library: Hordeum vulgare subsp. spontaneum top three leaves

ATACTCTCTCCGTCCTAAAAT
||||||.||||||||.|||||
TATGAGGGAGGCAGGGTTTTA

EST sequence (targeted fragment marked with yellow):
GNAATTCGGCACGAGGGTTTATTGTATACTCCCTCCCGTGCCCAAAATAAGTGAGTCACTTATTTTGGGACGGAGGGAGTATTAGATTGTAAAAAACCTCTAAGTTAGTAAACTAGATCTGTCCAGTTTTAGGAAATTTGTAAATACAGTGTGCCTTGGTAAAAAAACACACTTCTTTAAAAAACTGGAAATCATATTCTTATCACCAATCTTTTTTCATTTATATTCATATATTNNTCTGCATATCTTACTTGCTCTCTCAGCTACAGGGTTATTCATGTTTCTTCTACTCGCGTTTGTTTCTGACGGCAACAGAGGCAAAGGAACATACATACTCAGGGTAGTCCCGACTGATGCTTTTCATGCAGATAAAACAGTACGGATAGCTGACCAGAAGTGAACATGGAACCTCTTGAATTATTGCGGAAAGGTGTGATTTGGGAGAATATATGTTGATCAGAATAGGTTTTGTGAACGTCTGTAGGTCATGCACGTATGCAGAGAATTGATTC



gi|21163810|gb|BJ485368.1|BJ485368 BJ485368 K. Sato unpublished cDNA library, strain H602 adult, heading stage top three leaves

ATACTCTCTCCGTCCTAAAAT
|||||.||||.|| ||||||
GATGAGGGAGGTAGAATTTTA

EST sequence (targeted fragment marked with yellow):
CGTCAGCATGGCCAAGTAAGGCATGTTGAACCTGGTTCCTACGGTGGCGATTATGGCCTTGGCTTCAGCCCACCTGCCTTGCCTTCCATCAGTTAGTGCTCCGTTCACTCGGCAACAAATCGGCAATCCTAAAGTGTTCTGTTTCTCCATGCATGTATGTCACTGCAGTTCTTGAGTGGTAAAACTAGGAGGTCCATCATGTACTACGGTTCTGAGGGCTGGTACTTTTGGGGTATCTGAGATGGCTCGATTGGCTGTCCTGAATGAACTGTGTGGCAGACCAAGTTGTTTATCATGCGGTTTTTGCGTTTAGCAGCAAAAACCGTTAACTGTCCTGGGTTTATGTAACATATGATACTCCCTCCGTTTCAAAATAAGTGTCACAAATTCAATACTAAATTAGTATAAATTTTGTACTAGATCAACGGCATTTATTTTAAGATGGAGGGAGTAGTACTTACCTGACG



gi|21158123|gb|BJ479645.1|BJ479645 BJ479645 K. Sato unpublished cDNA library, strain H602 adult, heading stage top three leaves

ATACTCTCTCCGTCCTAAAAT
||||.|.||||.|||.| |||
TATGGGGGAGGTAGGGTATTA

EST sequence (targeted fragment marked with yellow):
TATATTTGGGAACCTATGCTACATTACAAATAATTTCCTCAATCTTTAGTCGAACCAAGTATATTTGAGAAGCTATTCTATAGAAAGTATACTAGAACCTTTAATTGTTACTCCCTTCATCCCATAATATAAGAGCGTTTACTTATAGTATTATGGGATGGAGGGGGTATTTTTGTAAGATAAGGTAGGGGGAATCATATAAAGCTGGAAATGAGCTATAAGTGATTCGTTCTTTCTTTGTTTCCAATCCTTAAAGCCAAAGGCGATTCGTTCATGATTATCGCAGAATTGTTCTAGACTTCCCGCCTGAGTTTCACCATTTGTACATTCTGGAAGTTCTTGGACCCTAAGTACAAAGGTTCGCAAAAAAACTGCCAAAAGAAACCATGAGTTTCAGGGACATACAAGTACAGGAGAGATAAGCCATGGTAACAAGTCAGGTCATGCAACGGAACATGACACCAAGGAGAGCATTCAG



gi|21158426|gb|BJ479954.1|BJ479954 BJ479954 K. Sato unpublished cDNA library, strain H602 adult, heading stage top three leaves

ATACTCTCTCCGTCCTAAAAT
||||||.|||||| |.||||
TATGAGGGAGGCAAGGTTTTC

EST sequence (targeted fragment marked with yellow):
AGGGGAGCTCTCGTTGCCTGATCGCTGACCCATCGTCCAATTGACCGCAGCGGCAGTTCCACACCGTCAAGGTGCTGCCAGCCACCGCCGTTTTATTGCCTTTGATTCGGCTGTGCGCGTGGGCTGGGAACCGTGCTCTGTTGTCTGATGCGTCGTTGGAGCGGGAGGTTTGGTCGGTCGAGGCCAGGTATGAGCAGCTCCTGAGCTGGCTGGATGGATGGATGCAGGTCATGTGTCGTGAACCAACACCAGGACACCTCTTTTGGAACGGAGGGAGTATATTTTGGAACGGAGGGAGTATGTATGTACGTATGGATATCATGGTCATGTTGCTTGGGGGTTCAACCTCTTTTTTGGATAAAGAAGAGGGGCGATGCCCATAATTATGACTGGCTGAAATAATCATGTCTTTGAGACATCAAGACAGCCGTGGCAAGGTGGGACTAAATAGTGTCTGAAAGTGGGTATCTGCGTTGGAGTTG



gi|21162593|gb|BJ484144.1|BJ484144 BJ484144 K. Sato unpublished cDNA library, strain H602 adult, heading stage top three leaves

ATACTCTCTCCGTCCTAAAAT
|||||.||||.|| ||||||
GATGAGGGAGGTAGAATTTTA

EST sequence (targeted fragment marked with yellow):
AACTGTGTGNCAGACCAAGTTGTTTATCATNCGGTTTTTGCGTTTAGCAGCAAAAACCGTTAACTGTCCTGGGTTTATGTAACATATGATACTCCCTCCGTTTCAAAATAAGTGTCACAAATTCAATACTAAATTAGTATAAATTTTGTACTAGATCAACGGCATTTATTTTAAGATGGAGGGAGTAGTACTTACCTGACG



gi|21161007|gb|BJ482549.1|BJ482549 BJ482549 K. Sato unpublished cDNA library, strain H602 adult, heading stage top three leaves

ATACTCTCTCCGTCCTAAAAT
||||||.||||||||.| |||
TATGAGGGAGGCAGGGTATTA

EST sequence (targeted fragment marked with yellow):
ATCTAGGCATGTGATCTGCAGGTACTCCCTCCGTCCCATAATATAAGGCGTTATTACATCCAATATACTCACATATTATGGGACGGAGGGAGTATCTAGTTGCTTCCTTTTGAATTAAAACTTTTTAACAACTAGAGCCGCTCTCTTCATCTCCTGAATACTCTTATGGGTGCATCATACCTGAAACCTCTCGTCTTTCAGGTTTTCCAGTTGCAAGTCGATAATGGTATCCCGATAAAGAGCTGGTTTGATGACCCCGCGGACCAGGAATTGGTTGAGTTACTCCCGTTCCTCGAGACCCTTGTTGATGCAGAGGACGTAAGGCCACTAATCTCAAAGACTTTTCACGGCACAATCCAGCAGGATTAGACTTAAGATGCATCCTTATCATGCACTGAGCCTGAGCTTGCCAGTTCCAGCGAGCTCCATCTTGGGAAATTAGGTATTAGGATCAGCATTCACCATTTATGTTATGTTGGCTGTTACAAATAGCAAGCATAAACTGCATGTCGCCATGGCTTGTATATGTAGTATTGTTCGGTTTTCTGTGTCGCAGGTCTTTGTACATAAACTATAGTAT



gi|21164572|gb|BJ486131.1|BJ486131 BJ486131 K. Sato unpublished cDNA library, strain H602 adult, heading stage top three leaves

ATACTCTCTCCGTCCTAAAAT
|||||| |||||| |. ||||
TATGAGTGAGGCAAGGATTTA

EST sequence (targeted fragment marked with yellow):
TGGCGTTATAATCGTGGAGATACTGACAGGACAAAAGGGTTATTCCGAAGATGATAATGTAATTGATGGTTGGATGATTCAATTGGAGACATCAGACCAGGCGGACACTCTGTTGGAACAAGTAAGAGTATGCACAAAACTGGGGATAGAGTGCATGGATCTGGACCCAAAGAAGAGACCTGTCGCCAGACACATAGTCGATCTGCTTGGCAAAACGGAAAGTGCTATGTATGCAGAAGAAACTGCCATCAGCTTCCCTGCCAAAAAAAGGTTGAAAGAAACTACCATGAGCACGGAGTGGTGGGACAGCCTGAGCGACCCGGAGTTCCGGCGGGCCTTTCGCATGTCAGGCGTCACGTTTGATGCGGTCTGCGACGAGCTCAGCGCCACCGTCGGCGAGGAGGCGGACGCCATCATCCCCATGCACCAGCGTGCTGCTGTCTGCCTCTGGCGCCTCGCCAGCGGAGAGCCCTTCGCCGAGATCTCCTGCCGCTTTGGCCTCGGCATTTCTACCTGCCACAGCAAACGTATGTAGACGCCTAGTGAAATCTCTTAAAAGACTTATATTTAGGAACGGAGTGAGTATTTAATACTCTAGGTTTATGATGGATTGAGGTCGATGAGTGAAGTAATAGTAATAGATGCATGCAAGAGTCGGTCTATTTATTTATGTACACGATGCATTCC



gi|18241224|gb|AV945427.1|AV945427 AV945427 K. Sato unpublished cDNA library, strain H602 adult, heading stage top three leaves

ATACTCTCTCCGTCCTAAAAT
|||||.||||||||.|||||
CATGAGGGAGGCAGGGTTTTA

EST sequence (targeted fragment marked with yellow):
AAGCTGCAGTTCAGGTGGGCGCTTNTGCTCTCCCTCCACACGCCCTACATCCACGTACACTCTTCTATCGGTACCTACACATACATGCGCCAGGTGGCTGGATCTCGCAGGGGCGATGTTTTTACTCACATCTCATGATGCATGTCAAGCTATTTGGAGCTTGCTTGCATCATTAAATGAGCATGCACTAATTGGACACAAATAAAGGAGATGAGTACTAAATGAACTTGTACTAAACAGAAACAATTTATTTATGGTGTACTCCCTCCGTCCCAAAATAATTGTCTCAAGCTAAGTACAACTTTATACTAGAGGTAATACAAAGTTGAGACATTTATTTTGGGACGGAGGGAGTACATAATTATCAAGTTGAAAGCTGATCTATAAATAGCAAGTATTGTCGTGTGTAAACCTTTTACTTGGTTCGTCTTTTACAGGAGCTCCATGGCTAAGAAAGTTAAAAGTGCGAAAGTGTGAACCCGTGAAACCCTACTCAGCAAAGAGTTGTTTGTTCTATTTGAGTGTAACGGATAGTAAATATTGTAAGTTGGCATATCTGGGGTTGGGGTTGTAATAGACATCAACAATGAATAGACNATTTAGT



gi|21158003|gb|BJ479525.1|BJ479525 BJ479525 K. Sato unpublished cDNA library, strain H602 adult, heading stage top three leaves

ATACTCTCTCCGTCCTAAAAT
|||||.|||||||| ||||
CATGAGGGAGGCAGGCCTTTA

EST sequence (targeted fragment marked with yellow):
AATGACTGGTCTGTATGTTTACATCCTACGTATTCGTCTCCACTGTCTGTATGCAAGTCCTTTTGTAATACTCCCTCTGTTCATAAATACTTGTCCTAGAAATAGATGTATCTAGATTTATTTTAGTTATGGAGATACGTCCATTTTGTACATTTCTAGAACAAACATTTCTAGAACAAGTATTTCCGGACGGAGGGAGTACTATATAAGCATCGACGACAATCAGCTCTCCATCTCAACAACAATCTTACCAGTGGCATGGCCATCGATACTGCTTTGCCACGCCTTGCCTGCGTCGCTCAAGGGGAACCTCGAGTCGATCACCGTCTTCAGCTTGCCTTCCTTGAGCAGCCCGACCAAGAACTCCAGGTCCGCCTTGTTGGGCGACAGGAGCAGGGGCACGAGGCGCTTCTTGGAGAACGTCACCCAGTGCAGCGCAGATGTGAGGATGGCCGAGAAATTGGGGGTGATGTCGATAACTCTCCCGGCGTCAGTCAGCAATGGCTGGAAAGACGACCAGCTGACACCGACGGTGCAGTGAACCACGCCGTCGTAC



gi|21160581|gb|BJ482119.1|BJ482119 BJ482119 K. Sato unpublished cDNA library, strain H602 adult, heading stage top three leaves

ATACTCTCTCCGTCCTAAAAT
||||||.|||||||| ||||
TATGAGGGAGGCAGGCCTTTA

EST sequence (targeted fragment marked with yellow):
ATTCGGCACGAGGTGTTTTTCTCCTCTGTGAAGAGAAGCCCAACCTGATAACTATCAAATGTAATATCTTCCACTTGGAATTCAGGCAGAGGTAAGCCTACTGCGACATTTATGTTACTAAAAACACATAATTGAACGCATTGACACTAATACGCCCTCCGTCCGAAAATACTTGTCCTAGAGATGAATGTATCTAGACTTATTTTAGTTATAGATACATTCATTATGTTTATTTTTAAGACAAGTATTTCCGGACGGAGGGAGTATGATTTTTTGGGTCTATGTGCCATATGCCACCTGCAGGATCTATCCACACCATGGCACAAAGCTGGTACAACCTTGAGATCTTTCTCTATCTTTCCTTTTCTCCTTCCGAGAAACGTAGTCTTGAGATCTTTTCAGATAGTGGACACATGCAAATAGTTACATATACAAGTCCAAGTTCTAGCAAAGTTGAAACACCAGTTTGTGGTTTTTGTGCCAAAACCAAAGGTGTCATCACAAACAGATAATAATAACAATATATATTAGGTAAGCAAGTTGCACAAGTGGGCCTTTTTATATTCCCACCCAGCAGATTGGTTTCTTCCCTAGCCAATCAAGCTTGACAGTGTAGCTTGCCTATCAGAACACTTTGGATTGCATATTTACATTATTTCTTATACCACTTGATCTTTTAATTTTCTCCTGATGTTACCTGTAATATCTTTG



gi|21160867|gb|BJ482407.1|BJ482407 BJ482407 K. Sato unpublished cDNA library, strain H602 adult, heading stage top three leaves

ATACTCTCTCCGTCCTAAAAT
|||||.||||||| .|||||
GATGAGGGAGGCAGAGTTTTA

EST sequence (targeted fragment marked with yellow):
CATGAACTAATGTTGTGTGGTATTATTTAGGGCTTGTGTCTTCAAAAANAAAAGAAAAAAGTTAGGGGTTATGTTGGATTGTAGCACAATTTTGTCTATGAGACTGTCATTTTTCAAGTACTTGAGCTGTAGGAATCTCCATGGCATGTATTCCCTCCGTCCCAAATAAGTGACTCAACTTTATACTAAACTTAATATAAAATTAAATCATTTATTTTGAGACGGAGGGAGTAGTAGTGAGCTAAACGCTCTTATATTTCTTTAT



gi|21158426|gb|BJ479954.1|BJ479954 BJ479954 K. Sato unpublished cDNA library, strain H602 adult, heading stage top three leaves

ATACTCTCTCCGTCCTAAAAT
||||||.|||||| |.|||||
TATGAGGGAGGCAAGGTTTTA

EST sequence (targeted fragment marked with yellow):
AGGGGAGCTCTCGTTGCCTGATCGCTGACCCATCGTCCAATTGACCGCAGCGGCAGTTCCACACCGTCAAGGTGCTGCCAGCCACCGCCGTTTTATTGCCTTTGATTCGGCTGTGCGCGTGGGCTGGGAACCGTGCTCTGTTGTCTGATGCGTCGTTGGAGCGGGAGGTTTGGTCGGTCGAGGCCAGGTATGAGCAGCTCCTGAGCTGGCTGGATGGATGGATGCAGGTCATGTGTCGTGAACCAACACCAGGACACCTCTTTTGGAACGGAGGGAGTATATTTTGGAACGGAGGGAGTATGTATGTACGTATGGATATCATGGTCATGTTGCTTGGGGGTTCAACCTCTTTTTTGGATAAAGAAGAGGGGCGATGCCCATAATTATGACTGGCTGAAATAATCATGTCTTTGAGACATCAAGACAGCCGTGGCAAGGTGGGACTAAATAGTGTCTGAAAGTGGGTATCTGCGTTGGAGTTG



gi|14527897|gb|AV835808.1|AV835808 AV835808 K. Sato unpublished cDNA library: Hordeum vulgare subsp. spontaneum top three leaves

ATACTCTCTCCGTCCTAAAAT
|||||.||||||||.|||||
CATGAGGGAGGCAGGGTTTTA

EST sequence (targeted fragment marked with yellow):
TTCAATAGCAGNNTCAAATTAGNATGGTCATGTACATATTACATGGTACTCCCTCCGTCTTAAAATAATTGTCTCAACTTTGTACTAGCTTTAGTATAAAATTGTACTAAGGTTAAGACACTTATTTTGGGACGGAGGGAGTACATATAAGGCTCAACCAGNATTAATTTAGGGGAGGGGGGAGAGGACTGTACAATTTCTGACAAAATTGGAGATGAACATATCTCCTGATCACAAACTCACCCTGACGTCCGTCAGAAAGATGAAAACCTCAATGCTGGTAAGGCCTCAAAGTTTCTCTAGTTCACGTTCCATCGAAGCGAAGTCAAAACCTTCCCAATCAAGTCCTACATCCAACTCAAACATTGGCAACGGTAGATGGCTGATGTCTGCCAGCCCGATGTAGTCGTCGCCAGGCGGTTTGCCTGTTGTGTCAACGAAGTCATTGACATGAAACATATCTGCCAGCCTTGAAATATCATCCAGTGAGAGTTTGTCAGTTGTGCAAACATAGTCACTGATAGGAAGCTCATTTATCTGGCTGTGGAATGCATCCACTGGAATTTCTTCATCGCTAGGTGTCGATGAGCAGTGCACTAAGCTTTCATCAACATTCATCCGGCCAAGGAATGCATCTACCTCAATTTCTTTACCTGGCAGTTCTGGTGAGCAATGCAGTAAGCTCTCATCAGCAGTGTCAGGGTCTATCTCCATTGGCGCTACCTTG