| mature miRNA: TTTTGGGACAGAGGAAGTACT species: Hordeum vulgare subsp. spontaneum database: miRNEST The numbers on the right side of the alignments show a score calculated for them. When calculating the score, a mismatch is given a score of 1, bulge: 2, and wobble: 0.5. |
| Predicted miRNA targets | |||||||||
gi|21161289|gb|BJ482831.1|BJ482831 BJ482831 K. Sato unpublished cDNA library, strain H602 adult, heading stage top three leaves TTTTGGGACAGAGGAAGTACT EST sequence (targeted fragment marked with yellow): TGAGCCATTCTATCCCTCTAGTGTCTGTTACCGATGGTATGCACGGTTCCTACATTGGTGTGAAAGGCGAAGCAATATACATCCCTCCGCCGGCCTGTATACCTGTGGACACCTGCGGAGCTGGTGATGCATATGCATCAGGAATCCTGTACGGTATCCTCCGGGGCGCATCAGACTTGAAGGGCATCGGCCTGCTGGCTGCGCAGGTAGCTGCTGTGGTTGTGGGGCAGCAAGGCACGCGACTAAGGGTTAAGGATGCTGACAGATTGGCCGAATCGTTTGAGTTCCACCTTGACAACCTGGAGTTCTGTTCAGATGCTGGAACAGACCAGGTTCCCAACTTATGATATTTCCTCCCCCTCAAGTCCCAGGTCCTCGACAAACGGCGGCGATGGGAACTGCCGAGGGCCGAAGCGGGTCGTGCCCCCTTCTCTAGAAGATCACTTAAGCGATTGCTTAGTTTTACCACTCAGACTCAGGTTCTATATAAAATGCTAAACCAGCACCTCCTTCCAAAAGCATGCCAACAGATACCACAGGTCCTAGCTAGGCACATTCACTTGTACATAGCATTTCATTCCTTTAGCCCTAGCTCGTCGTCAGCCCTCTCGGCCTCTGTCAGCACTTACATTTTTGCACCGGAAGGATGCTACATAGTACTCCCTCTGTTCCGAAATATAAGAC | |||||||||
gi|18239961|gb|AV944164.1|AV944164 AV944164 K. Sato unpublished cDNA library, strain H602 adult, heading stage top three leaves TTTTGGGACAGAGGAAGTACT EST sequence (targeted fragment marked with yellow): GCGTTCTAAGTTCCTGGTATACAAGCGCTGAGATTCTCAACTTTTGTGCTATTGTAATACTGATATTACCTTCTGCTGGAAAGTATTATTAAGTCAATGTTCTGGGAGAAGACGTTGAGTCAACTAGTTTGGTAATTTACCTGGCTAAGATGCAAAAGAGGGCATTTTGGATGCCTATAGTGGAAAAAGAACTGAGAAAAATCGTCTCGACGGGTTGTGTCAAGCAAGGAAGGTGTGACAACAAACACGCATTTTGATATTCTGGCAGTCTTTTGTAGTGTAATTTAGTACTTCCTCTGTCCCAAAATAACTGTCTCAAGCTTAATACAAATTTGTATTAAAGCTAGTATAAATTAAGACACTTATTTTGGGACGGAGGGAGTATCTAAGAGTATATTCTCGGTCCCTAGTAGTGATGTTCTAGATAGGACCAGTGGGGAAGCTACAAGATGTAATTTCCACTAGTGGGGAAGCTAGGAGATGTTCTAGATAGGATTTGGGGCTAACTACGTTTTTTTAAGGTGTAATTTCCACTAGTGAGCAATGAGAAAGACTAGATCACTGAAGGATGTATGGATTCGNATTGGGACCGAATAGNATGTAT | |||||||||