| mature miRNA: GTGTTCTCAGGTCGCCCCT species: Lactuca saligna database: miRNEST The numbers on the right side of the alignments show a score calculated for them. When calculating the score, a mismatch is given a score of 1, bulge: 2, and wobble: 0.5. |
| Predicted miRNA targets | |||||||||
gi|83808170|gb|DW068387.1|DW068387 CLLY8157.b1_I23.ab1 CLL(XYZ) lettuce saligna Lactuca saligna cDNA clone CLLY8157, mRNA sequen GTGTTCTCAGGTCGCCCCT EST sequence (targeted fragment marked with yellow): ATTTTGGAAAGGGAATATGGGATTCTTAAGAACAGTTGCAGCATCGTCAACAGCGACGGCCGTCACAGCAGCAGCAACAGCTCTCGCTCTCAATTCCCTCTCCCCATCTTCATCCTCCTCTTACAATTACAATTTCACCAAACCCTTTTTGAATTCGTTCCCTTCGACCCCAAATCGATTCGACCTCAACAAGACTCACACCAAACCTCCTTCAGCTCTTCACATGGACGCTAAACCCGCCCTAATGTACGATGCGGAATTACCGGAAGTTATGACAGAGTTCATGGTGGATATGAGTTGCGAAGGTTGTGTTAAAGCGGTGAAGAACAAGTTACAAACAGTCAATGGAGTTAAGAGCATTGATGTGGATTTAAGCAATCAAGTAGTCAGAATTTTTGGGTCTTCGCCCGTTAAGACCATGGCTGAAGCCTTGGAGCAAACCGGTCGAAAAGCTCGACTAATTGGTCAAGGCTCTCCAGGAGATGTGTTGATTTCGGCTGCCGTGGCGGAATTCAAAGGCCCAGAGATTTTCGGAGTAGTTCGTCTGGCTCAAATAAGTATGGAATTGGCAAGAATCGAAGCCAACTTCAGCGGTTTATCACCCGGGAAAAAACACGCTTGGTCTATCAACGAATACGGTGATCTAACAAGAGGTGTCGCAAGCACCGGGAAAACATTCAATAAGGCTGTTGGTGACCTGGGAACACTGGAGGTTGATGAGAGAGGTGAAGCTTTTTTCTCGGGTGTCAAAAAGGACCTTACAATTGCTGACCTCATCGGTAGAGCAATAGCAGTGTATGAAAGTGAAGATAGATCGGATAGTGGAATTGCAGCTGCTGTTATTGCAAGAAGTGC | |||||||||