| mature miRNA: TTGGACTGAAGGGAGCTCCC species: Liriodendron tulipifera database: miRNEST The numbers on the right side of the alignments show a score calculated for them. When calculating the score, a mismatch is given a score of 1, bulge: 2, and wobble: 0.5. |
| Predicted miRNA targets | |||||||||
gi|165957866|gb|FD499443.1|FD499443 Ltu01b_200_C09_C012.g1 Liriodendron Flower Bud Library Liriodendron tulipifera cDNA clone 12 TTGGACTGAAGGGAGCTCCC EST sequence (targeted fragment marked with yellow): GTTCGATCTTCGCCTCCGCAGCAGCAAAATCCCACCAATCTTCTGGCTTTACTAGCCAAGTGAAATCCCACCAAAATTCTGGCTTCACAAGCCAAGCTCATTACTCAAACCCTCCACTTGGCACAGTGCCGTTAGGTGTCACCACCGGCGGGGGCGATCACCACCCAGAGCTGCAGCAGTTTGCTTTCCTGCAAGATCATCTCGTCCCTGTGGCCGCCACTGCCCCGAATGACTACAATCTGAATTTCGCAATCTCTTCCAGCCTCGCTGGTTACAATAGGGGGACCCTTCAGTCCAATTCACCATCTTCGTTGTTGCCTCACTTACAGAGGTTTCCTTCTTCGGTTGTCATCGACGGCCCACCACCGAACGTGCCATTTTTCATAGGGACCGCTGCCGCCGCATCTGCTGCCAGTGGTGGGGCCGAGAGTCAGTTCCCAGCTGGGTTTGATGGCCGCCTGCAGCTCTGCTACGGCGATGGGTGCAGGCATTCAGACCTGAAGGGAAAAGGGAAGAGCTGAAACCATAGGAATAGCTGCTGCTGCTGCGGAAACCCTCGCTCGCCTTCTTCCTTCCTGGTGTGCAGGACCTCTTTTTCCCAAATCCGGAGCTCGACAGTGGCACGTGTCCGGGTCCACCTT | |||||||||
gi|165953019|gb|FD496316.1|FD496316 Ltu01b_150_E08_C012.g1 Liriodendron Flower Bud Library Liriodendron tulipifera cDNA clone 12 TTGGACTGAAGGGAGCTCCC EST sequence (targeted fragment marked with yellow): TTTAAAACTTGCTTAAACTCACCACGTCTTATAGCTGAAAAAAAATACAACCAAACTACAAAAATTCCATATCAGATAGTGCAGAATCTCAATCCAAACATGCAGAATCTAAGTCCTAAGGAGTTCATAATTCAACTAAAAAAGAGCAAAACAGCCATAGCCGAAGAACAAAGTCTAGCCCTCCAAAAAAACATGGATTACCTGGAGAGCTATTCTTATGCGGTGGTGGCTGATGTGGCTGCAAGGCGTTTCCTAGCCTCTTCAATGATGGAGAGCTTGATACCCTTGCCCTTGGGCAGAGACACCCACGGCTTTGTCCCCTTGCCGATGGTGAACACGTTACCCAGACGGGTCGCAAACTCGTGACCGGTGGCATCCTGAACGTGGATGGTCTCAAAGGTGCCCTTATGCTTCTCCCTGTTCTTGATCACGCCAACACGTCCCCTATTCCTGCCACCTGTCACCATGACAACGTTCCCGACATCAAACTTGATAAAGTCGACGATCTTGTATGTCTCAAGGTCAAGCTTGATGGTGTCATTGGCCCTGATGAGTGGGTCTGGGTAGCGGATGGTCCGCCCGTCGTAGGTGTTCAGATAGGGAATGCCCTTCTGTCCAAATTGCACAGACCGGACCTTGCAAAGCTTGAACTTTGCCTCTTCGTCCTTG | |||||||||