| mature miRNA: ATACTCCCTCCGTCTCATGAA species: Lolium perenne database: miRNEST The numbers on the right side of the alignments show a score calculated for them. When calculating the score, a mismatch is given a score of 1, bulge: 2, and wobble: 0.5. |
| Predicted miRNA targets | |||||||||
gi|300191626|gb|GR524194.1|GR524194 ELPLPE2020D06-g1RSP_20010725 Perennial ryegrass etiolated seedlings library (LPE) Lolium per ATACTCCCTCCGTCTCATGAA EST sequence (targeted fragment marked with yellow): GTTGTATACCAGCACAACAAGTCAAGTGATGTTATATCGGCACATGATTATCACCTCATGTGGTTTCCGAAATGTATCAAGGAAAAAGACATCAACATCAAGGTCGGGTGGTTTATCCACACCTCTTCCCCAGCATGGAGATGTTCCGGATGCTGCCACACCACACAAAGCTGGTTTGCTCACTACTTTCTGCTGATTTAGTCGGGTACGTAACAGGTCGAATTTTAATACATACTAATATTTTTTGTTGAAATTGGCTGTGTTGAAAAAGCACAACTGTTTTATCTCAACCCCCTATACTCATTCTCATATTATCTCTGTCTATAAAAGAATGTCTAAATTCGGATGTATCTACACACTCTTTAGTGTATAGATACATCTAAATTTAGACAAACATCCGAAATCTTTTTATGGACGGAGGGAGTATTTCTCATTCATGATTAACGTATATCTTCTACCATTTTGCAAATGCTCTCTTTACACGTAAAAGAATCAGCTGTTTCATCGGATAAGTCCTGGCGCCAGGGACGCACACCTGCCCGGCCACTGTGAGGACGTCCACGTTGTCCAGCCAGTGGAGCACGGCCAGCAGGGCGTCGTGTGGCAGCTCCATGCAGTCCCTAGTCGCCTCTTTCTCCTCC | |||||||||
gi|300182706|gb|GR517391.1|GR517391 ELPLPE1002F03-b1T7_20000915 Perennial ryegrass etiolated seedlings library (LPE) Lolium pere ATACTCCCTCCGTCTCATGAA EST sequence (targeted fragment marked with yellow): GGGAAAAATTTATATGCCCCGCTCATAGATAGCTTAATCACACATACTCCCTCCGTCCCATGAAACATGTCGGAGATTGCTTAAATTTAGATGTACCAAGCCACTAAATAGTATCTAGATACATTCGAATTTTGACAAATCTCAGACACGTTTCATGAGACGGAGGGAGTATAATAATGTTGTTGAGCGAGCAATCTTCTCTTTTAGGCCTTGTTCGGTTAATTCTCTCCCCCCCTCAGTAGTTCTGGATAATCCCAGAGATGGATGAGTATGTCCCCACGCAAGCACAGGTAACTCCTACGACAATGATGAATGAGCAGACCACAACCTGATACCAAGCCACTTGTGTCTTAAGGATAGCCAAAAAGCAGGCACAGGGTAGAATGTAGGTCACAAGCATGGCGAGTAAAGAACCAATCAGAGCCATCACAAGTGCAAAAAAGGGAACCGATAGAGCAACGATGAGGGTTGATATCACCAGGGCTGATCTAAGCAAGATTATGTTCGAGTACTTCTGCTGACTTCGTGGCAGCAACTCTTCCAAACTCATAGCCAGAGGGGTTATGGTTAACGCATATTTGGTTATTGGATTTGCTACTGTAGCCCAAAT | |||||||||
gi|161088119|gb|EY457948.1|EY457948 gsa_002d_d04 Lolium perenne gsa Lolium perenne cDNA, mRNA sequence ATACTCCCTCCGTCTCATGAA EST sequence (targeted fragment marked with yellow): GGACGTAGAGTTTTCGCACTAGGAAGTGGAGCTGAAGCCTGCAGGTGGACAGAGATCTCGTGGTTATTGATGGTCACCGGGCAGATGTTAATTTGGCGCAGAAGCCGAAGCACAGCCGCCGGAGAGAATAACTCTGACCAGTTTTTGAGGAGGGGGAACGGGACGCAGGGGTAAAAGAGGGATCTTAGTGATACCCACGACCATACGCCTTAAGCTATGAGGAAATTTTGTAAAAAAAATTACGCCCTAAGCTATGAGATGGAGGGAGTATATGCCTATGTAGTAGTAGTAGCATCTAACGAGTTTTTCAGTAACTATAGTTCAGTAGTTCTTTCATACATCCCCTTTAACCTATATTTCTGAACATAAGACTACATCATATAATTTCAGTTAGCAAACCTTTTGGATTTCTTTCGTACATCCCCTTTAGCCTAATTTTATCACTGTCATGTGCATAGCTTCTGATTCTGCGTATTATCAGTAGTTCTTTCATACACACTAGTCTCTTGTATATTTCTTCACGCTAGAGAAATGAATGTGCATGCATTAGCTCAGCATTACCGGATGCTGGTGGGGCGTTTATTGAAAACTTGTTCATTGGTACTGTATGTTGGTATCACTGTTCACTCATGGATTATGATTTTGTAGAGCTTTGTGTTATTTAGTTAAATTACATGCTAAATCTGTCAAATACTTGTGGGTCACCTGGTTGACAATTATTCATCATTTGGAAATGCAGAAAC | |||||||||
gi|300192432|gb|GR519649.1|GR519649 ELPLPE1022A02-b1FSP_20010115 Perennial ryegrass etiolated seedlings library (LPE) Lolium per ATACTCCCTCCGTCTCATGAA EST sequence (targeted fragment marked with yellow): TATTTTTTTTTTTTTTTTATTGTTTTTTTTGGCTCCAAAAACTAAAATAGTATTATGAAACGGAGGTAGTATAAAATAAACATGCCGGTACACTTATTAACGAAATGAAACAGACATCTAGATCTAGGATAAGCAAGGCCATACATAGGCGATCTGATCATACACGCAGCGCTCTTCCTGCTCAAGTTCTCTCTCTCTCTCTCTC | |||||||||