| mature miRNA: TACTACTGGTGGTGGTGGCGC species: Lolium perenne database: miRNEST The numbers on the right side of the alignments show a score calculated for them. When calculating the score, a mismatch is given a score of 1, bulge: 2, and wobble: 0.5. |
| Predicted miRNA targets | |||||||||
gi|300188059|gb|GR515913.1|GR515913 ELPLPH2001F05-b1T7_20001020 Perennial ryegrass 3 wk seedlings, heat-stressed for 8 hrs at 37 TACTACTGGTGGTGGTGGCGC EST sequence (targeted fragment marked with yellow): AGGGGATACTCCCCGGTCAATAGAATATCATTGAATAAATTTAGAGGAACAACTCCAGGTCCGAACAAGAGCAAAACAACTCCGTTCAGGTCTACTACAGCTTTGTATGGCTTTCCATTCCATCTAGTAAGGCGGCACAATGTAGTGATACCACCACCTGTAGTATAAGTTCCACCTGCCTGAGCCCTTCACGTTGCGCGTCAAGGAGAAAAGGCGTAGCATGCTTGCTACTTATAACCAACCAACAGCTTGGCCTGTCTAACAAGGGAGGAATATGAGGAGCATGCCTGCGGATTTAACAGGCTTCCGCAGGAGGGGTGTGGTTTGCTTAGGTACCCAGTGCTGCTTTTTTACAAATCGGGCAAGTGTTCTTTATGACGAGCCATTGCTTAATGCATGCTGTGTGGAAGTAATGCCCGCAGTCCACCCTGCCCATGTCCTCGCCATCAGCATAGTCCTCCTGGCAGATACAGCATGGTTCAACACCTGTTGGAGGTTCAACCTCCAAAGGGATGTGGAGATATTTCCACTGCTTCAAGCCACCCATTACTTTCTCCTCGCTAAGCCCAGTACTCACATGCCCTATACGCTCACCAAGTGCCAATAATTCCTCGTATGACATATTATCCACATCAAGCCGCATCTCACGATGCCTATCAATCAAACTGGCTCTCCTGATAAGTGAACGATCAGCAAGAAAATCCTCCAGTCTAGCAGCACTTCTTCCCTGTCGAAGTGGTTCGAACACACT | |||||||||