| mature miRNA: TGAAGCTGCCAGCATGATCTG species: Lotus japonicus database: miRNEST The numbers on the right side of the alignments show a score calculated for them. When calculating the score, a mismatch is given a score of 1, bulge: 2, and wobble: 0.5. |
| Predicted miRNA targets | |||||||||
gi|93659018|gb|BW598483.1|BW598483 BW598483 Lotus japonicus suspension-cultured cells Lotus japonicus cDNA clone LjCa-014-CF01 5 TGAAGCTGCCAGCATGATCTG EST sequence (targeted fragment marked with yellow): CCTTTGTTTATATAAAGTCTCGGTTCGTGCACCTGCAATAGTTGAAGCTGCCAGCATGATCTGAGCTTACCTTCTTGTAATAATGGTAAGAACAGATCATATGGCAGCTTCACCTGTTGAATGGAAGCATACAGACCCTAATCACCTTTCTCTCATCTTTGAAAAGATGAATTTCATTCGGCATCACACAGCCCTTTACAAAAGTTGAATTGCTGTGTTCTTCTGTTGGTCAAATCTGGAAATGGCACTCGATCCGTGGCAAAAAGAAAGAGGAGAGGGATCGTGGCATGTGTTCAGGATTTTCAATGCATCCTCTTGCCTTGGATATGAGGACAGTGTTTTTTACTTTTTAAGAACTTTTGTAAGTCACCTAAAACTTTTTTTCCCCATCTTTTTCTGTATCTTATGCTATCTTAATTCTTATGCATTGGTTTTCATTTGTACTAAAAAAAAAAAAAAAA | |||||||||
gi|179641991|gb|DC599158.1|DC599158 DC599158 Lotus japonicus roots Lotus japonicus cDNA clone MR033f09_r 5', mRNA sequence TGAAGCTGCCAGCATGATCTG EST sequence (targeted fragment marked with yellow): CTTTGCCAAATCTCCTCATTTCTTTATTTATTTTCTGGACTAGTGCTAAGTATGCTTAATTTATGCCAGTTATAGTTTGGGGAGATGTAAAGGTATCATGCTGGCAGCTACACTAGTGCAGTCAATAAGAGTACAATTTGTGGGCCATCAACTAGGGACATTGGAAGAACTGATCCATCATCCTTGCCAGCTAACTTTCCTATAAGTTCAAGGAGATAAAGTCCGTGCTTGTTAAAATCTCCTTTGGCTAGTTCCTCCTCCCCTACGCCACATCGCTAGGATGCTCATGAGTTGCACTAGTTGCATCATCAACAGTAAAGGATCAGAAAGCATTAATCTGAATTTGTGCATATTGACAGAAGGTTCCTGTTTTGAATTGTTAAACTAGATGTCTGCTTGAACAGCCCCCTTCCCTCGGCTCCTCCTAAACAATGTCTCTTGCATGAGAAACGCCCAGCAATTTCTGTGGCACGTGAATGTCTCTCTTCATGATGGAGGGGCGGCTTGTGCTAACCGGTGCCATTGGCTCTANAAAGTCAACTTTCTTGCCCATGTTAGCCGGGTTTTCCCATCCTTCTGCTG | |||||||||