| mature miRNA: AACTTAAATATGTTTTCAGTCC species: Medicago truncatula database: miRNEST The numbers on the right side of the alignments show a score calculated for them. When calculating the score, a mismatch is given a score of 1, bulge: 2, and wobble: 0.5. |
| Predicted miRNA targets | |||||||||
gi|10705909|gb|BF005634.1|BF005634 EST434132 DSLC Medicago truncatula cDNA clone pDSLC-38K7, mRNA sequence AACTTAAATATGTTTTCAGTCC EST sequence (targeted fragment marked with yellow): CTGGATTGGGGACTAAAAAAGGTTGTTGGTGGATCTGAACATACTTTACGTGCAAAGCTGACATTTTCGCAAGAATTACATGGAAATATTATGAAAGAAGCTGGGCCTCTTAGTATGACATTCACTATACCTATGTACAATTCTTCAAGGCTTCAGGTGAAGTACTTGCAAATAGCAAAGAAGTCAAAAGCTCATAATCCATATCGATGGGTTAGATATGTAACCCAGGCAAACTCGTATGTTGCTCGGTTGTAATCTGCAAGAATCTAATTTCTGAAAATACTTGTTTTCCAACTCATGGATGTTCACGTATGCTGAATAAATTCAGGAAAATTGCAGGGATTTAAAACATATTTAACTTTAATTTTATTATCTGAAAATTTCTGTTT | |||||||||
gi|157982185|gb|EX530457.1|EX530457 MTGland_A067_2007-07-11/MTGlandA067_C09_038_1 Medicago truncatula A17 glandular trichome Med AACTTAAATATGTTTTCAGTCC EST sequence (targeted fragment marked with yellow): TACGGCCGGGTTGGCTACCACTCTGATCAGAGCAAGCTGGCAATGATGCCATACCACGTGATGACACTATTGCAATATATATATATATATAGCATTGGATTCAATATCAGATTCAGTCAAAATATTTTTATAAGGAAGAAAACAAAAAGGGACAGTGCAAGACAAAATAACAAGGCCAATTTTCTATTCATTAGTGAAACAACCAACACAAAATATTTAGTATCATTTTTTCCACACTTCCAATCGCACTTTGAAATGAACAGAAGGATCTCTAACTGAACCACAGTGAATAAGACAACAAAAATTCACAAAATTATTTGTTTGCATGCTTTGTGGAGCTAAATTTTTGTAGGTGCTGAGCACTTTCCCCAACAAAATAATCCTTGAGCTTCACTGGGCTGAAAAATACTTAAGTTTATGCAAAAATATTGAGCTTCATTCTCCTTATCCAATGATATGTTTTGATATAATGTTTAGAAGGGCTAAGTATATGTTTTAGTATAGAAATTATACCAATATTCGTATAAATTATTCGAATATTCCAATCACACTTAATTCACTTTTAATACTTGGCGTGAAGGCAATAGAGATTGGTTAGCTAACTTTAGTTTACCTTTAAACGCTTTTGATTTCCATGTAATGGAGACTCCTCCTATATATGGAACTTCAAAATATTCTCTTTGAAGACAGATGCGGCACTTGCATGCCTCGGAATGTTCGTTTAGATTTATAGTTTTCTTCTTGAACTTTTGCCCTCTTTT | |||||||||