miRNEST 2.0: an integrative microRNA resource miRNEST 2.0, an integrative microRNA resource :: Browse




mature miRNA: ATGAGTTTCATCAAATCATGT
species: Medicago truncatula
database: miRNEST
The numbers on the right side of the alignments show a score calculated for them.
When calculating the score, a mismatch is given a score of 1, bulge: 2, and wobble: 0.5.

Predicted miRNA targets
gi|20273562|gb|BQ137436.1|BQ137436 NF003C12NR1F1000 Nodulated root Medicago truncatula cDNA clone NF003C12NR 5', mRNA sequence

ATGAGTTTCATCAAATCATGT
||||||||||| ||| |||||
TACTCAAAGTACTTT-GTACA

EST sequence (targeted fragment marked with yellow):
TGATNCGCCAGCTCGAAATTAACCCTCACTAAAGGGAACAAAAGCTGGAGCTCCACCGCGGTGGCGGCCGCTCTAGAACTAGTGGATCCCCCGGGCTGCAGGAATTCGGCACGAGGCTGACCGAAGTACTGACAAATTGATGTGTAATGGCCTTAATGTGTTTTGATTCTCATTACATGTTTCATGAAACTCATTTGATTGTTTTTATAGTTTTCTCAATCTGAACTGAAGTTTGTTAATGAAAAGTGAAAACCTATGTGATCATGTAAAACTTCTTANCGGTGTTTATTCGAAAAGATATGCTTAATGAAAAGCATNTCATGTTCATTAAAAAAAAAAAAAAANAAAAAAAAACTNGAGGGGGGGCCCGGTACCCAATTCGCCCTATAGTGAGTCGTATTACAATTNACTGGCCGTCGTTTTACAACGTCNTGACTGGGAAAACCCTGGCGTTTACCCAACTTAATNGCCTTTGCAGCACATNCCCCTTTCCCCAGCTGGCGTNATAACNAAAAGGCCCGCACCGATCGCCCTTTNCCAACANTTTCCCAACCTTAATGGCNAATGGCAAATTGTAANCCNTAATNTTTTTNTTAAAATTNCCGTTAAANTTTTGTTAAATNANCTTATTTTTNACCCANTNTGCCNAAATCGGNNAAATNCNTTTTNNATAAAAAAATTNACCCTCNTANGGTTTTTTTTTNTTCCCTTTTNGAANANAAACCCCNTTTAAAAAAATTGACTTCACTTNAAAGGNNAAAAACNNTTTTAGGGNGATTNCCACTANTTTAACNTNNCCTNATTAANTNT



gi|27405969|gb|CA919039.1|CA919039 EST636757 MTUS Medicago truncatula cDNA clone MTUS-6H10, mRNA sequence

ATGAGTTTCATCAAATCATGT
||||.||||||||| | ||.|
TACTTAAAGTAGTTGAATATA

EST sequence (targeted fragment marked with yellow):
TTTGGACCAAAAGAAGAAATTCGATTTATATTACTCGAGTCATCATATAAAACAGTGAGTAAAAATGTACCTTTGTAATTATTATACATACGCATATTCTGGGGTATATAACATTGAGCTAAGTAAAGGATGACAAAAAATGTATACCACATATAAGTTGATGAAATTCATGACACCAAAATACCACATTAAAAACAATACCAGTTTAAATGCCTGACTCTTCAAGAAGTTTTAGAAGATTATGCTCAGGAGCACTAAGGGATGGTAGGATCATTCGATTAGAGTGAGATCTTCGCGGCCGAGGAGCAGGACCTTCAGACTCAATGGCTCCCCCTTCCTTCATTACTGGCAGGTCGCCTCTTCTACGCACGGTAGCAGATGCCCGTTCTTTCCATATTCTTCCATCATTGAGAATAGATGGTTCTGGTAATGGGCACTGAATAGGTCGATCATTATCAAGGGGTTCAACTGGATGTTCAACTGGCTTAAACTCAACAGCCACTTCAATTCCATGAGAAGTTGCAGTGGTAGCACTTGCAGCTACAGCAGCCGCCACCTCTGAGTTTGCAGGCGTCACTTCCCTCTCATCCAGAGCACTTTGTGTTCGTCGATGGATATTCTTTCCAACAGAGAATCTAGAAAACAAACCCACCATTTTTTCAGCTGAAAAACCAAAACCCACCAAGAAAAAACGATTTTTTTAACGTTGGTGTGATTTTCTAGTCAAAGGGTCGATTTTAATCTAGTATTTGACAGTTTTTGTTTTGAACACGTGAAATCAGTGGTTGCATGAAACGGGGTCTGATCCGGGGTAAAGTTCGGCCCGAAGCCAAATGAAAAGAAAGAGAGA



gi|9677402|gb|AL377650.1|AL377650 MtBB32H10R1 MtBB Medicago truncatula cDNA clone MtBB32H10 T7, mRNA sequence

ATGAGTTTCATCAAATCATGT
||||.|||||||| |||||.
TACTTAAAGTAGTATAGTATC

EST sequence (targeted fragment marked with yellow):
CAATGGGTTGATCTTGGAACAGCACCAGCACTTCCTGAATCTAAAAAATTGTCCAATAAATTGTTGTCTCTTGGTATCAAGATTGCGTTCTTAACAGGCAGACCACTCAAACAGAAAGAAATTACAGCTAAGAACTTGAGACGTGCTGGCTTTAAGAAATGGGAGAAGTTAATTCTCAAGAATACAGCCATATATCATGGTAAAACAGCAGTTACATACAAATCATCTGAGAGAAAGAAATTGGAGGAAGAAGGATACAGAATTGTTGGAAACATTGGAGATCAATGGAGTGATATTCTTGGAACCAATACTGGTGAAAGGACTTTCAAGCTCCCTGATCCCCTCTGCTACATTGCCTAATTAACCACTTTCTGTGCTTAATTAATGATCTTTTATTCTATATGCAATATAATTCCTATGATATGATGAAATTCATTCCAAGCTAGCTACTTGTATTTTCTCAAATAAAG



gi|9681322|gb|AL381571.1|AL381571 MtBC01G04R1 MtBC Medicago truncatula cDNA clone MtBC01G04 T7, mRNA sequence

ATGAGTTTCATCAAATCATGT
||||.|||||||| |||||.
TACTTAAAGTAGTATAGTATC

EST sequence (targeted fragment marked with yellow):
AATCTTCCATATTATGCTAAACACGGATTTGGGGTGGAACCATACAATGATACATTATTTAATCAATGGGTTGATCTTGGAACAGCACCAGCACTTCCTGAATCTAAAAAATTGTACAATAAATTGTTGTCTCTTGGTATCAAGATTGCGTTCTTAACAGGCAGACCACTCAAACAGAAAGAAATTACAGCTAAGAACTTGAGACGTGCTGGCTTTAAGAAATGGGAGAAGTTAATTCTCAAGAATACAACCATATATCATGGTAAAACAGCAGTTACATACAAATCATCTGAGAGAAAGAAATTGGAGGAAGAAGGATACAGAATTGTTGGAAACATTGGAGATCAATGGAGTGATATTCTTGGAACCAATACTGGTGAAAGGACTTTCAAGCTCCCTGATCCCCTCTACTACATTGCCTAATTAACCACTTTCTGTGCTTAATTAATGATCTTTTATTCTATATGCAATATAATTCCTATGATATGATGAAATTCATTCCAAAAAAAAAAAAAAAAAAAAA



gi|14985035|gb|BI310708.1|BI310708 EST5312458 GESD Medicago truncatula cDNA clone pGESD8H6 5' end, mRNA sequence

ATGAGTTTCATCAAATCATGT
|||| |||||||||| ||.|
TACTGAAAGTAGTTTTATATA

EST sequence (targeted fragment marked with yellow):
GATTTGAAGTCTGAAGAACAAGTGAGAGTAAGAAGAGATTGTCGCCAACTACAAAGGATAGAAGAGGTTCCTACAAAAGAAGGAAGACAGATGAGACAAGGACCATAGTCTCTAAAACAATTGGTGACACTCATTCCTGGAGAAAGTACGGACAGAAGGAAATCCTCAATTCTAATTTCCCAAGGAGTTACTTCAGGTGCACCCGGAAGCATGATCAAGGTTGCAAAGCAACCAAACAGGTACAATTGATAGAAGAGAATCCAGAAATGTACCAAATTACATACATTGGCTTTCACACATGCAAATCCACTCTACACACTCCACAAATGGTCTCATTCTCTGAAGATACTAATTGGGATTCAATTCTTGTGAATTCTAATCCTCACTCAAAGGAGGTTCTAACAAATTATGATCAACAAGATTCACATGTTATTAGCTCAGAAAGGTCAATTGTGAAACAAGAATATCCCAACAACGACGACAGTACTACTCCGAGGAGTGATGTTACTGACAACTTATTGGATCCTAATTTGTGGTCTGATTTTAAGGATTTTGAACTCTCCAAGGATATTGTGTATTCCTGCACTGAATCTCAAAATCTTGAAATTGATTTTGGGGGTGTTTTCTTTCTGATTTCAGCAATGATTTGATATATTTTGATGAAAGTCATTTGCTTTAATTAGTTAGCTTATTGAGTGTGTACGTATTTTGATCTTTCACGTCTGTCAATTTGATG



gi|9674167|gb|AL374415.1|AL374415 MtBB06E01R1 MtBB Medicago truncatula cDNA clone MtBB06E01 T7, mRNA sequence

ATGAGTTTCATCAAATCATGT
||||.|||||||| |||||.
TACTTAAAGTAGTATAGTATC

EST sequence (targeted fragment marked with yellow):
ACGGATTTGGGGTGGAACCATACAATGATACATTATTTAATCAATGGGTTGATCTTGGAACAGCACCAGCACTTCCTGAATCTAAAAAATTGTACAATAAATTGTTGTCTCTTGGTATCAAGATTGCGTTCTTAACAGGCAGACCACTCAAACAGAAAGAAATTACAGCTAAGAACTTGAGACGTGCTGGCTTTAAGAAATGGGAGAAGTTAATTCTCAAGAATACAACCATATATCATGGTAAAACAGCAGTTACATACAAATCATCTGAGAGAAAGAAATTGGAGGAAGAAGGATACAGAATTGTTGGAAACATTGGAGATCAATGGAGTGATATTCTTGGAACCAATACTGGTGAAAGGACTTTCAAGCTCCCTGATCCCCTCTACTACATTGCCTAATTAACCACTTTCTGTGCTTAATTAATGATCTTTTATTCTATATGCAATATAATTCCTATGATATGATGAAATTCATTCCAGCTAGCTATCTTGTATTCTCAAATAAAGTTAATTATAATAAAAAAAAAAAAAAAAGTCGAGGG



gi|89244418|gb|DY616205.1|DY616205 AC1633 NOLLY Medicago truncatula cDNA 5', mRNA sequence

ATGAGTTTCATCAAATCATGT
||||.|||||||| |||||.
TACTTAAAGTAGTATAGTATC

EST sequence (targeted fragment marked with yellow):
ATACAATGATACATTATTTAATCAATGGGTTGATCTTGGAACAGCCCCAGCACTTCCTGAATCTGAAAAATTGTACAATAAATTGTTGTCTCTTGGCATCAAGATTGCATTCTTAACAGGCAGACCACTCAAACAGAAAGAAATTACAGCTAAGAACTTGAGACGTGCTGGCTTTAAGAAATGGGAGAAGTTAATTCTCAAGAATACAACCATATATCATGGTAAAACAGCAGTTACATACAAATCATCTGAGAGAAAGAAATTGGAGGAAGAAGGATACAGAATTGTTGGAAACATTGGAGATCAATGGAGTGATATTCTTGGAACCAACACTGGTGAAAGGGACTTTCAAGCTCCCTGATCCCCTCTACTACATTGCCTAATTAACCACTTTCTATGCTTAATTAATGATCTTTTATTCTATATGCCATATAATTCCTATGATATGATGAAATTCATTCCAGCTAGCTATCTTGGATTTTCTCAAAAAAGGTTAATTTTATAANTGCGTCATC



gi|27409555|gb|CA922625.1|CA922625 EST640343 MTUS Medicago truncatula cDNA clone MTUS-56B7, mRNA sequence

ATGAGTTTCATCAAATCATGT
|||||||| || ||||||..|
TACTCAAACTACTTTAGTGTA

EST sequence (targeted fragment marked with yellow):
ATACCGCAGCAACAATTGTGACCACCGTTGGATATAATGTTGATTAATTCTACTAAACCATCAGTTACATTGCCTTCATATCTTCAAGTAAGTCTATCATGTTTAGATTGACAGTAAATTTAGTATAATCACGCATTTTTAACAAATGCTACTATATAGCGATGTGATTTCATCAAACTCATCATGATTCCAACCCATGCACTTAGGTTCTGTAAAATCATGATAAGACAAACAAAGGGGGTGATTCATTTTGGAAGCATAAGCCAATGTACAAAGGATGTTTCTACTCTAAGCCTTTTTTACTTTTCTATGACAAATCTATACTGAAATTCGTTCATCTTCTGTGATTGCTGCCAAATTCACCACCTTCCTTCAATCTGCTTTTTGTACAGCAGTCTTAAATATAAGGATGTACAATTTTTGATCCATTGAGAAATATAAAAATCCTCCAACAGAATGGGTCACAAATGATCCAAAACTAGTCCCCACAATACAGTGCCATGCTGGTCCATACACCCCATCAAATTCCTGCAATATTTCAACCCACACAACCGAATTCATTGACCAATCATTCACTAAAATATTCAAAGACTCACTCAAATTTTGAATTACACCCTAAATTATTCTTAATGCAAAAGTAAGCCACGTTTATATATGATATTCTTTAGGAGGAGACAAAAATGATTGTATTGATTTTGCCTCCAACATTAATCTAACTTCAAAACTACAATTTCTAACATATAATTAATTGTTCAAATCATTTTGCTAAATTT



gi|11934052|gb|AW696128.2|AW696128 NF102F10ST1F1090 Developing stem Medicago truncatula cDNA clone NF102F10ST 5', mRNA sequence

ATGAGTTTCATCAAATCATGT
|.||||.||||||||.| | |
TGCTCAGAGTAGTTTGGGAAA

EST sequence (targeted fragment marked with yellow):
GTTTCTTCAAAAGGGGAGTGAAACTTATGTTGATAAATGGAAGCCGGTTTCAATACCCCGGGGTACACTTCAGGCAACTTTTCTCCATAAAGGGTTTGATGAGACTCGTCGGCTTGGCATCAGAAGTGAGACAGAGCAGATAGTACGTAATGCTTCTCCTGCCACTGAAACTGGAATGCTTGTTGTGGAATCTGCGGTGCCAGGTGGTCCAGCCTATGAACATCTGGAACCGGGTGATGTACTTGTTCGTGTCAATGGTGAGGTCATTACTCAATTCCTGAAACTGGAGACTTTGCTTGATGACAGTGTAAACTCAAATATTGAATTGCAAATTGAAAGGGGTGGCACATCAAAGAGCGTAACTCTATTGGTGCAAGATTTGCACTCAATAACTCCCAATTATTTCCTGGAAGTTAGTGGAGCAGTAATCCAACCTCTTTCATATCAGCAGGCTAGAAACTTCCGATTCCATTGTGGCCTTGTTTATGCGGCAGAACCAGGATATATGCTCTCTAAAGCAGGAGTTCCTCGCCATGCAATAATTAAAAAATTTGCTGGTGAAGAAATATCTTGCCTCAAAGAACTAATATCAGTTCTGTCTAAGACTATCAAGGGGTGCTCGAGTACCGTTGGAGTACATAAGCT



gi|260523868|gb|GT144504.1|GT144504 METCS63TR JCVI-MT3 Medicago truncatula cDNA 3', mRNA sequence

ATGAGTTTCATCAAATCATGT
||||.|||||||| |||||.
TACTTAAAGTAGTATAGTATC

EST sequence (targeted fragment marked with yellow):
GGTAAAGACATATGGGTTTTTGATATTGATGAAACTTCACTATCAAATCTTCCATATTATGCTAAACACGGATTTGGGGTGGAACCATACAATGATACATTATTTAATCAATGGGTTGATCTTGGAACAGCACCAGCACTTCCTGAATCTAAAAAATTGTACAATAAATTGTTGTCTCTTGGTATCAAGATTGCGTTCTTAACAGGCAGGCCACTCAAACAGAAAGAAATTACAGCTAAGAACTTGAGACGTGCTGGCTTTAAGAAATGGGAGAAGTTAATTCTCAAGAATACAACCATATATCATGGTAAAACAGCAGTTACATACAAATCATCTGAGAGAAAGAAATTGGAGGAAGGAGGATACAGAATTGTTGGAAACATTGGAGATCAATGGAGTGATATTCTTGGAACCAATACTGGTGAAAGGACTTTCAAGCTCCCTGATCCCCTCTACTACATTGCCTAATTAACCACTTTCTGTGCTTAATTAATGATCTTTTATTCTATATGCAATATAATTCCTATGATATGATGAAATTCATTCCAAGCTAGCTATCTTGTATTTTCTCAAATAAAGTTAATTATAATAAATTGCGTCATGTCTTATTCTGTTCAAAAAAAAAAAAAAAAAA



gi|9668232|gb|AL368479.1|AL368479 MtBA24G04F1 MtBA Medicago truncatula cDNA clone MtBA24G04 T3, mRNA sequence

ATGAGTTTCATCAAATCATGT
||||.|.||||||||| | ||
TACTTAGAGTAGTTTAATTCA

EST sequence (targeted fragment marked with yellow):
CTCCATTGAATAATCGAATCAAAATTTGGTAAAACGAAGATTGTAATTGTTTTTCAACAATGGCTCAGATTCCTAACCTTGATAATGCTCCCGTTAATCTCACATCCATCAGGGAACAATCTCAAAAGGAACTCATCAACATCCTCAAGAATGTTCGAGGAAAGAAGTGTTTGGTGATTGATCCCAAGCTAGGTGACTCTCTCTCGCTTACCATACAAACTTCCATTCTCAAGGAGCAAGGAGTTGAGTTGCGGCATCTTTCAGCTGAGCCAATTCAAAGTGACTGTAACAAAGTGATTATCCTTGTGCGCTCTCAACTTAATTTGATGAGATTCATATGCTCTAATGTTCACGACGACATATCAAAAGGACTACAGAGAGAATATCATGTTTATTTAGTTCCCCGCCGCACTGTTGCTTGTGAGAAAGTTCTTGAGGATGAAAAATTACATCATATGATTACAATAGGGGAATATCCCTTGTATATGGTGGCAA



gi|11903298|gb|BF639140.1|BF639140 NF080F02PL1F1025 Phosphate starved leaf Medicago truncatula cDNA clone NF080F02PL 5', mRNA se

ATGAGTTTCATCAAATCATGT
||||||||||||| || ||.
AACTCAAAGTAGTTGAGAACG

EST sequence (targeted fragment marked with yellow):
GCACCAGTCGCCGTGGAAGAGGCCGTGCTACTGCATCGAGGAGTGCACTTCCGTCTTGGTACCCGAGGACGCCGTTGCAGGATATCACTGCTATTGTTCGAGCGATTGAGAGAAGGAGGGAGAGACAGGGAACTGAGGAAATTGAGCAAACTGGAACACCAGTTCATGCTAACCAGCTGACCATTTTCTCTGATCCATCTTCATTCTCTGCTGCTATTGGATCTTCTTCACGCGTCCACAAAAAATCACCAAAATCCTGCATCAAGCTGAAAACACCTTATGGAAGTAAAGTTCCAAAAATCATCATTGACATTGCAAAACTTCCTGCTGCTGAAGATGGTGAATCTGAGCTTCTGACTCCTCAGAAGAAGCTATTGCATTCGATTGATATAATTGAGCGTGAAGTGAAGCAAGAGTTGATGAAACTCAAGAGAACCCCTACAGCCAAAAAAGCAGAACATCAGAAAAGGGTTAGGACCTTGATGTCCATGAGGTGAATTGAANAAGATTTAAAGTGCAGGAAAAAATTAAAGAGAATTGAAGGAGAAATCTTANAGCAAATGGGAAAGGAGATTTGGGCTGAGCTTAATCATCTTCTGATGATTTATAG



gi|57501424|gb|CX532705.1|CX532705 s13dNF45G05MJ036_271693 Methyl Jasmonate-Elicited Root Cell Suspension Culture Medicago trunc

ATGAGTTTCATCAAATCATGT
||||.|||||||| |||||.
TACTTAAAGTAGTATAGTATC

EST sequence (targeted fragment marked with yellow):
GCACGAGGGCTGACTCTAAAGCAGTTAACCGTGAAGGTTATTTCTATGCAAAGACTCTTAATATAACAACTGGTAAAGACATATGGGTTTTTGATATTGATGAAACTTCACTATCAAATCTTCCATATTATGCTAAACACGGATTTGGGGTGGAACCATACAATGATACATTATTTAATCAATGGGTTGATCTTGGAACAGCACCAGCACTTCCTGAATCTAAAAAATTGTACAATAAATTGTTGTCTCTTGGTATCAAGATTGCGTTCTTAACAGGCAGACCACTCAAACAGAAAGAAATTACAGCTAAGAACTTGAGACGTGCTGGCTTTAAGAAATGGGAGAAGTTAATTCTCAAGAATACAACCATATATCATGGTAAAACAGCAGTTACATACAAATCATCTGAGAGAAAGAAATTGGAGGAAGAAGGATACAGAATTGTTGGAAACATTGGAGATCAATGGAGTGATATTCTTGGAACCAATACTGGTGAAAGGACTTTCAAGCTCCCTGATCCCCTCTACTACATTGCCTAATTAACCACTTTCTGTGCTTAATTAATGATCTTTTATTCTATATGCAATATAATTCCTATGATATGATGAAATTCATTCCAAGCTAGCTATCTTGTA



gi|57568457|gb|CX541432.1|CX541432 s13dNF92E05GS039_466166 Germinating Seed Medicago truncatula cDNA, mRNA sequence

ATGAGTTTCATCAAATCATGT
||||.|.||||||||| | ||
TACTTAGAGTAGTTTAATTCA

EST sequence (targeted fragment marked with yellow):
GAATGATTCTCCATTGAATAATCGAATCAAAATTTGGTAAAACGAAGATTGTAATTGTTTTTCAACAATGGCTCAGATTCCTAACCTTGATAATGCTCCCGTTAATCTCACATCCATCAGGGAACAATCTCAAAAGGAACTCATCAACATCCTCAAGAATGTTCGAGGAAAGAAGTGTTTGGTGATTGATCCCAAGCTTGGTGACTCTCTCTCGCTTACCATACAAACTTCCATTCTCAAGGAGCAAGGAGTTGAGTTGCGGCATCTCTCAGCTGAGCCAATTCAAAGTGACTGTAACAAAGTGATTTTCCTTGTGCGCTCTCAACTTAATTTGATGAGATTCATATGCTCTAATGTTCACGACGACATATCAAAAGGACTACAGAGAGAATATCATGTTTATTTTGTTCCCCGCCGCACTGTTGCTTGTGAGAAAGTTCTTGAGGATGAAAAATTACATCATATGATTACAATAGGGGAATATCCCTTGTATATGGTGGCAATGGATGAGGATGTACTATCATTTGAACTTGATCTTTC



gi|11959876|gb|BE318407.2|BE318407 NF038A09LF1F1066 Developing leaf Medicago truncatula cDNA clone NF038A09LF 5', mRNA sequence

ATGAGTTTCATCAAATCATGT
|| |||||||||| |||| .|
TAGTCAAAGTAGTATAGTTTA

EST sequence (targeted fragment marked with yellow):
TGCAAACAAGTAAAATACCCGAGAGAAACTGGTTCGGGTCAAAAACCTGTTCAAACAAGCAAGTGCAGTGAGTGAAGCCTCGCACACAGCAACCTGGTTATCTCCATAATTCATAAACCCTAATACCCTTCCCAACTTCGCCGCCGTCTTCCGTCGCACTCCCTCGAGTTACTTCTCACTTTCGTCTTCTTCAACCTCCGATATTTGCTCTCTATTCTGAAACAGTACTATTCAAGATTTCGCCGGTGAAAAAACTAATACAGAATGGCGAAGAAAGGAGGAGGAAGCAAAAGTTATCAGAAGAAGAAAGACGCTACAACAACTTCCCGACGCGACCGTTATAACTTTTCCGCTGAAGACATGGACGACGAGATTGATATCTTCCATAAGCAGAGGGATATTGTTCCACTTGACATTAATGCTGATTCTGCTGATCAGATGAAGATGATGAAATGCCTATTTTCAATGATAAGGATATTTGATATGATGAAACTGATGAAGACGGTGACGAGGAGGAAGACCATGATGATGAGG



gi|20281319|gb|BQ144260.1|BQ144260 NF056G01DT1F1005 Drought Medicago truncatula cDNA clone NF056G01DT 5', mRNA sequence

ATGAGTTTCATCAAATCATGT
||.||||.||| || |||.||
TATTCAAGGTAATTAAGTGCA

EST sequence (targeted fragment marked with yellow):
TGATACGCCAGCTCGAAATTAACCCTCCTAAAGGGAACAAAAGCTGGAGCTCCACCGCGGTGGCGGCCGCTCTAGAACTAGTGGATCCCCCGGGCTGCAGGAATTCGGCACGAGGAGGCACACATAAAAATAAGATAATTTAGTTTACTGTCATTCGACATTTTCAACAGCCTTCCATATTGATGATCAATCACAATTGTATCCTACTTCCCCCTTCTGTCACACCCTGCTTATCTGAATCCTTTTCTGTTTAATGATCTGGATGGCAAGCTTACGATTAATGGGTCTGACTGAAAATCAGATGACCAAGTCACAAACGATACAATAATTAATGCAAAAAACAGGTGGTTGATGCCTGAATCAAGCATCCATGAATATTATACTAGGACATTTCTATTTTTCCTTTATCAGCTGACAAGGGGGCATTTTTTGGCCATAAGGGAAATTTGTAACTTTACAATGTGTACATACAGGGATAAAAAAGATTGATCTAGGGAAAAGCCATTTAAACCTTGAATTTAATGCTAATTAACTATAAATAAACCTTAGGTCATCATTCTAAAACCCACACATGGTATGATTAGAAATACGAAATATGGGCTGGTGGATGAGTTATTTCCGTCCCGTGCCCCAGTTTCAATTTCATGACTCTCATGGGGGGGCACGTGAATTAATGGAACTTATTGAACCTTTTATTACAAGTCCTTGGTCAACTTTAAATTCCCCTTTCAGACTTGAGAACACATCAGCCGCTTAACTCACTTCTACCTCCGCCTCTGTCAACCTCTATTTTCCAACACAGAGCAAAACCTTATAAGCC



gi|14982863|gb|BI308536.1|BI308536 EST529946 GPOD Medicago truncatula cDNA clone pGPOD-7M3 5' end, mRNA sequence

ATGAGTTTCATCAAATCATGT
||||||||||| | |||||.|
TACTCAAAGTA-TATAGTATA

EST sequence (targeted fragment marked with yellow):
AAGATAAAGAAGAAAATCTAACCTACTCAAATAAGCAAAGGTGTCATGTATGGGAGGTATAACTTAACAGTTCAGTTAACTCACTCTAGAAAACATATGATATATGAAACTCATTCTTTTATGCAAAACCACCTCTTTTGGAAACCCCAATGACCCTATGATTTAAATGGCATCATAGCACTGCCTTGTTTGAAAAACTACGAAGATAAAGCAAGCATGATCCCGACTTTCATTACCCGATGCATAGCCGGCTGATGTGATCAACAGTCTTGCCACTAACTGGTTTGCATTGAAGAGGCAGTCACTAAAATGCCTTCACCGGGTTTAAATACATTACCGGTGGGAACATCAGAGGCTAACTTATCTCTGTTGGCAGCAATAACTTCGTTATTGTTGTCGTCCAAGCGGACAACTAGAGAAAAGTTTTTTGACACTTGCTTGATGAAATCACCAGTACTGTCAGAAGAACTCCTATGCTCACTCCCCCCAACTAATCCAGTAGGCATTATGCTACTTTGCTGCCTTGCCTTTCGTTCTTGCATGGCCTTCTGCCGGTCTTCATAGAAATCAAAATCATCCAGGATAGACGTATCAGTTTCATAGTTTTT



gi|148766887|gb|ES613581.1|ES613581 MTGland_B011_2007-05-03/MTGlandB11_A02_008_1 Medicago truncatula A17 glandular trichome Medi

ATGAGTTTCATCAAATCATGT
|||||||||||||||| | .
TACTCAAAGTAGTTTATTCTC

EST sequence (targeted fragment marked with yellow):
TTNCGGCCGGGCCCNCGTCACACACCCCAAAAACCAAAACAATCTTCCATAANATAGGACGAACCAATTTTAGTCTTTTTTTTAATTGATACAATTTCCCAATTTTAGATATGCTTTTGTTAGATCTTAATATGAATGACAAATGTTAGGAACAATCTCTTATGTTCTCGAAAAATGATACGAACACTCTATGATATTTATTCTCTTATTTGATGAAACTCATGCGAGTCTCACCATTTTATTTAGGATTCATTCTCAAAGTCTGGTACCCACATGACTTCATCTAAWAAGATAGTGAGTGTCANAGAATGTCCATAACAATAGTATTCTCCACTTGCTCCCTTTCACGGCTCGAGCTGACAACCATCGATAAAGCGTTTTACCAACTAAAAAAATAAACACACACATCTAATCTCTTTTCTCCTAATAAGATAGTGACAATATATTGTCGCTAAATTCCCTAAAAAAAATATTTTTGCCAAATAATACTATATAACAAGTTCCTCGC



gi|157981728|gb|EX530000.1|EX530000 MTGland_A061_2007-06-22/MTGlandA061_E12_044_1 Medicago truncatula A17 glandular trichome Med

ATGAGTTTCATCAAATCATGT
|||||||||||||||||||||
TACTCAAAGTAGTTTAGTACA

EST sequence (targeted fragment marked with yellow):
CGGCCGGGGNNCAGATTCTAAAGCACTTCTCTCATTTGTCACTGGATTCAACAAAGTTGTCCTTGATGTGCATTACTACAATCTTTATTCGGACAAATTCACTAACATGAATGTTCAACAAAATATTGACTACATAAACAACGAAAGAGCCTCAGATCTTAGCGGCGTCTCTTCAACAAACGCTCTTAGTTTTGTAGGGGAATGGACTGATGAGTTTCTTGTGCAAGGTGCATCTATGCGAGACTACCAAAGATATGGCCAAGCACAACTAGATGTGTATTCTCGTGCAACATTTGGATGGGCTTATTGGGCATACAAATGTCAATATAACCATTGGAGTCTCAAGTGGATGATCGAGAATGGTTACATAAAGCTCTAGATGTAAGGGGTTACTTTCCCCACCCCGAACATCAAATATTTGTTATCCAAAGAAACGAGAACAACACACATTTTTCAAATACTCTCTTTGATTGGTTAAAGTTCACATACGTCTCACAAAATTTATATGGGAACCACATGATTTGATGAAACTCATGTAAATTTTAACCAATCAAAAAGAGTATATTGAAAAGTGTATGTTAAAGTACGTATTGCTAACATTTCTCGCTTTATCTGACTGTAAACTTAAATAATATGAGGATTTTGTAGTAGCAANNNNGANGAAAAGTAATGGCCATAAATGTATTGTGCTTATACTAATTAATAAAATACTACATTTCGNANAANAAAANAAAANAAAAANNNATGTCGGCCGCCTCNGCCCTCGANAAGCTTTCNNNNNCATTCNTTTGG



gi|89329057|gb|DY632772.1|DY632772 Medicago--02-D11.g1 Subtracted medicago cDNA library specific for UV-B irradiation Medicago t

ATGAGTTTCATCAAATCATGT
|||| |||||||||| ||.|
TACTGAAAGTAGTTTTATATA

EST sequence (targeted fragment marked with yellow):
TAGCGTGGTCGCGGCCGAGGTACTACTCCGAGGAGTGATGTTACTGACAACTTATTGGATCCTAATTTGTGGTCTGATTTTAAGGATTTTGAACTCTCCAAGGATATTGTGTATTCCTGCACTGAATCTCAAAATCTTGAAATTGATTTTGGGGTGTTTTCTTCTGATTTCAGCAATGATTTGATATATTTTGATGAAAGTCATTTGCTTTAATTAGTTAGCTTATTGAGTGTGTACCTGCCCGGGCGGCCGCTCGAA