| mature miRNA: CAGCCAAGGGTGATTTGCCGG species: Medicago truncatula database: miRNEST The numbers on the right side of the alignments show a score calculated for them. When calculating the score, a mismatch is given a score of 1, bulge: 2, and wobble: 0.5. |
| Predicted miRNA targets | |||||||||
gi|33104613|gb|CF067954.1|CF067954 EST668675 MTUS Medicago truncatula cDNA clone MTUS-1H7, mRNA sequence CAGCCAAGGGTGATTTGCCGG EST sequence (targeted fragment marked with yellow): ATTCAAGCAGAAGTATATCTTACTAGTGAACTAAGGGAGAAAAACATGGCTTCCTCTATGATGTCCTCTTCAGCTGTGACTACAGTTAACCGTGCCTCTTCGGTACAATCCGGTGCGGTGGCTCCATTCGTCGGACTCAAGTCCATGGCTGGCTTCCCAATTACAAAGGTCAACAAAGACATTACCTCCATTACAAGCAATGGCGGAAGAGTAAACTGCATGCAGGTGTGGCCTCCTATTGGCAAGAAGAAGTTTGAGACTCTTTCATATCTTCCACCATTGACCAGAGAACAATTGGCGAAAGAAGTTGAATACCTTATAAGGAAGGGATGGGTTGCTTGCTTGGAATTTGAGACCGAGAAAGGATTTGTGTACCGTGAGAACCACAGTTCACCAGGATACTATGACGGACGTTACTGGACAATGTGGAAGTTGCCTTTGTTTGGAGCAACTGATGCTTCTCAAGTGTTGAAGGAGCTTGATGAAGTTGTTGTTGCTTACCCTAATGCCTTTGTCCGTATCATCGGATTCGACAACGTTCGTCAAGTTCAATGCATCAGTTTCATTGCACACACACCTGAAGTTTACTAAATTTGAGTGGTAAATCACTCTTGGCTACCATTGGAGGGACATTTTTTTCGCTCTATTTGGTCTGGTTGGAATTTCCTTTTTATTTTTTAAGGAAATGTCGTACTGTGTTTTTCAGTTTTACCTTTCGGATTTTAAATGCAAATGATGGATAAGAGTGATAATGAATGCACTTCTATTGATCTCCC | |||||||||
gi|20295124|gb|BQ158067.1|BQ158067 NF021E04PL1F1024 Phosphate starved leaf Medicago truncatula cDNA clone NF021E04PL 5', mRNA se CAGCCAAGGGTGATTTGCCGG EST sequence (targeted fragment marked with yellow): TGATTCGCCAGCTCGAAATTAACCCTCACTAAAGGGAACAAAAGCTGGAGCTCCACCGCGGTGGCGGCCGCTCTAGAACTAGTGGATCCCCCGGGCTGCAGGAATTAACGCCATTACCCTCGCCAACAACATCAGCACGCATAATAAAGGTACTGTTACCGCTCAGGTTCTCTACGTTTAATGTGGCAAATGTGCCGGCAGTTGACCCGTGGCTGGCAAAATCGACAGTTGAATGGCTCAGCGCCAGCGTGTCGAGATTAGAATTACTTGTTACGTTCCAGACGCTGTTATTCATTGCAACGTCCAGTTTTCCGCCATTGACATTATCGCTGAGGGAGGAACCTGTCCAAACCGACCCAGGGTGCATATCCAGATTGATTAGCCCACCTTTGGAAAGAACGCTACCGTTGATAAGCATACGACCCGAGGCGTTGATGCGGCTGGCGGCATAACCATCGTCATGTTGCGTTGCGATGGCCATCTGGTCGGGTGTACTCATATCAATGACCAGATCGCTCGTGAGGTCGATCTGGGGCCCGGTACCCAATTCGCCCTATAGTGAGTCGTATTACAATTCACTGGCCGTTCGTTTTACAACGTCGTGACTGGGAAAACCCTGGCGTTACCCAACTTAATCGCCTTGCAGCACATCCCCCTTTCGCCAGCTTGGCGTAATAGCGAAAGAGGCCCGCACCGATCGCCCTTCCCAACAGTTGCGCAGCCTGAATGGCGAATGGCAAATTGTAAGCCGTTTAATATTTCTGGTTAAAATTTCCCGTAAATTTTTCGT | |||||||||
gi|14983478|gb|BI309151.1|BI309151 EST530561 GPOD Medicago truncatula cDNA clone pGPOD-10H22 5' end, mRNA sequence CAGCCAAGGGTGATTTGCCGG EST sequence (targeted fragment marked with yellow): GAATATATAAAAGCGTGGTTATTCTCCTATAGAATCAAGATGTCTGCCAGCATAATAATTCTGAGCCAAAGTTTCCATCTCAAGATGAGAATAAATACTGAAGAAAAACTAACTTATTTTCTGATCCATGCTTTCATAAGAGTGTCATACACTACTCAGCTAAAATGTCACTCATTACAAGTCTTTCTGAAAGCTAAAAGATAGATAAATAAACTAACCTCCCATTTTGACAAGCTAAAATTAAGAACTGATAAGCTAGATTAAAATAAAAACATCCAAACTAAGAAGCACTTTACAACATAGTGAGCGACAAGATTTTCTTAGTCTTCATTAGTTGTCTTTGAGGTTCCGCCGAAGCACCCTTTGCTGCGCCTTTTGCTGCTACTACTCTTGTTTCCGATGTGAATAAAATCCCTTAGAAACACCACTGTTTTTCCAGAGAATTTGTTCTTCCCTTTGTTTTTCTTTTCATCACTCAAATTCAGCAAAACATAGTGGATGTTCTGCATCTCAAACTGCAACCGTCCTATCTCTTCCGAACCTTTTCGCGCCTGCTCTATCACTCTTTTTCTTTGCATCTGTCTACTCTTTTCCACTCCACCGAAGTCTCCCTGCTTGAAGACGGGACACTCTCTTTGATCTCCTTTGTCAGTTGATCATTAG | |||||||||