mature miRNA: CATGACATTTAGTGATGATGT species: Medicago truncatula database: miRNEST The numbers on the right side of the alignments show a score calculated for them. When calculating the score, a mismatch is given a score of 1, bulge: 2, and wobble: 0.5. |
Predicted miRNA targets | |||||||||
gi|13781068|gb|BG645956.1|BG645956 EST507575 KV3 Medicago truncatula cDNA clone pKV3-48E19 5' end, mRNA sequence CATGACATTTAGTGATGATGT EST sequence (targeted fragment marked with yellow): TCTTTTCCTTTCTTTCTATCTTGGTCCCTCTAGATTTTTAATGGCTTGTCCTTCAAATTCAATCACCTACAATGGCACCCTTTGTGCTTGTTTACCAGGACATGTTCTTGATGTTGTGTCAAAGAAGTTGCAAACTCTTTAAAGCTGACTCAACTATTACCACAGATACTGGTGTTGATTTCTATGCTCTTAAGCTGCCAGAGACACTTCCTGGATTTGATTCTCTTAAGAAGTTTACACAGTCACAGGCTGTGTTCTTGGAGGCTACACTTGTTATGCTTCTCTCTTGGCTTATGTTTTGCTTATTTCTTAGGTTTATGAGCCTTGGTGATGGTCGTGGTGTGTGGTTTAAACTTAGGTGGTTTGTTAGTCGATTGGATATTTGTTTTGCTACTAGACATTGGCTGGACGATAAGAAAGTAGTAACAAAACGCAAAACTGAACTTGGTGGAGCTTTCTCCATAGCAAGTTGGATACTTTTCATTGGTTTATTTGCTGCGTTGCTATACCAGATCATATCAAAGAGATCAATTGAGGTTCATAATATAAGAGCAACAAATGCACCAGAATTAACCTCATTTCTAAATGACATGGAGTTCAATATAACAACTATATCTAGTATGAGCTGTGCAAATCTACGTGATCTCGGTAACTTAGTTTCTGGAAATCCGGGATTTATTGACGAAAGAGTTGTTTCTCTGTCAACTTTAGCAACTACTCATGTCACAACTCAAGCCAGGGGACCAACATAGCACTCAAGTGTTAAAGGTTGCAAGCTCATCT |