| mature miRNA: CCTGTAATCCCAACACTTTGA species: Medicago truncatula database: miRNEST The numbers on the right side of the alignments show a score calculated for them. When calculating the score, a mismatch is given a score of 1, bulge: 2, and wobble: 0.5. |
| Predicted miRNA targets | |||||||||
gi|157981266|gb|EX529538.1|EX529538 MTGland_A055_2007-06-26/MTGlandA055_F05_019_1 Medicago truncatula A17 glandular trichome Med CCTGTAATCCCAACACTTTGA EST sequence (targeted fragment marked with yellow): TTTTAGTAGTATCTTGATGTCTTCCACCCCCACTGGCTTCTACATGCAAGTTAAGACATACATATATAGTAATGGTCTAGTGCTCAGACTTTAACATTCTCCATTAAAGGAAAGCCTGAGCTCCTTGGAAAAATGGCCAAATCCAAGGTAGGAAAAATAACAGGGTAAACTTGGAACACCTTGCTGTTCTAACAAATAAGAGAACCTGTCAGGAAGAAACAGGAACCATCTTGAAAAGGATGTCACCAGCCAACATGGAGACTTCTTGTTTTTTTTTTTTTTTGANANANANTCTTGGCTNTGTTGCCCAGGCTGGNGTGCAGTGGCACTATCTCAGCTCACTGCAACCTCTGCCTCTCAGCACTACAGGNGTGTACCACCNCGCTGGGNTAATTTTTGTATTTTTAGTACAGATGGGGNTTCACCATATTGGNCAGGNTGGNCTTGAACTCCTGACCTCATAATCTACTCNCCTTGGCCTCCCAAAGTGNTGGGATTACAAGCGTGAGCCACTGCGCCCGGCCAGACCACTATAAAGGATAAAATTATGAGTTAATATATGAATTAAAAACNGAACAAGTCCACACTGATCTGAAAGTAAGTGTGGAGGCAGGAGGAAGAGAAACATCTTCTTTAGAGAAGAAAGCCAAATAATAAATACATAAGGGATTACAGAAATAGAAAATCACCATTTTTACAATCACTATAGTATACTATTACTGATTCAGGTAAGAATCAGTGAATACTAAAACNACTATGTGAAAGACTGTCGGGAAAAAGGANTGTCACAGTGTCAAAATATCATTCCACAGATTGCTTATTAATTACAAAAAGAACAAAGTACCTTTACAACTGGGAAANCTGGAAGGNACTGCCTTNANCNAGTGATCNAACTTACTACCNCCNATGATNAGCACAAATTC | |||||||||
gi|157981278|gb|EX529550.1|EX529550 MTGland_A055_2007-06-26/MTGlandA055_G07_026_1 Medicago truncatula A17 glandular trichome Med CCTGTAATCCCAACACTTTGA EST sequence (targeted fragment marked with yellow): TTACGGCCGGGGGGTTTCTCCATGTTGGTNNGGCTGGTCTCGAACTCCCGACCTCAGGTGATCCACCCGCCTCGGCCTCCCAAAGTGCTGGGGTTACAGGCGCGAGCCACTGCACCCGGCTCCACTCCACTCCTTGTTGCTGTCGGGTGGGACAGCAAGGCTGGAGCCCAGCATCCAATTAGGAAACAAGGTGGAAATCCAGGGCCAAGCCCCATGGCTGCCAGTTGCCCTCGTAATTAAAGACACACACATTAAAGACAGCTCCGAGGTGCCATTAAACATCCATTAAACTGGCAAAAAATAAATCCAAAAGGTAAAACTCAACTCTAGTTGGCAACTGCAGCAGAGAACACAGCACAGGTCACAGGTGGCTCANNGGCAACAGCCCTCACACCTGGCTCCCTGTCCCTGCCCTGAATTGTTCCATGTGGGAACTGGGCCACACTGGTCAGCTTCATCAAAGATAGATTTGCCAAATTGGCATACAATTCACATGTCATAAAATTCACTCTCTAAAAGCGTACAAGTCAGCACGGTCTCAGAATTTCCTGAGACCAATAAAACCTCCGGAGCCCTTTGACCCAGCACTCCAGCGTTTGGGAATAAGCCCTGTAGAAGGAGCCCAAGAGGAAACAAAAATAGAAGTGTGTCCAAAGCTGGAAGCTGCCCCAGCCAAACACTGGAAACACCCAGCTCTCCACCNNGACAAACCACGCGAGCCACAGCTTGCGGGCGATATCCCATCTCCATCCTCACCACTGCTCAGCCCAGACCTCCCTCATCTTCCTGGCCTGCAGACCTAGCAGTGGCTGTTCCCACCCCTGGAACACCCTTCCCACCTGGTACCTGATGCCTGCANGGCCCATGCACGGCATATTCACTGCTGTATCCCTAGAGCCTCGCACAGTGCCTGGTGCAGAGANGATTTTCAGCAAGAGGCACCGAAGGGAANATACCTATGTGACTGTGNGNNNNNCNGNNGANCNAGTGGNANCTCTGAANNCTGATCGGGCNNNTCATNNTNA | |||||||||
gi|157983746|gb|EX532018.1|EX532018 MTGland_B031_2007-06-04/MTGlandB031_B04_015_1 Medicago truncatula A17 glandular trichome Med CCTGTAATCCCAACACTTTGA EST sequence (targeted fragment marked with yellow): TTACGGNCGGGGNNGGGGTATTACTCTGTCATCNNGGCTGGAGTGCAGTGGCATAGTCATGGCTCACTGCAGCCTTGAACNCCCAGGCCCAAGTGATCCTCCCNCCTCANCCTCATGAGTAGCTGGGACCNCNGGNGTGCNCCCCATGCCCAACTAATTATTTTTGTAGAGATAGGATNTCACTGTGTTGCCCGGGCTGGTCTCAAACTTCTGGCCTCTAGTGATCCTCCCGCTTTGGACTCCCAAAGTGCTGGGATTATAGGTCTGAGCCACCATGCCCAGTCAGCGTTTATCANATTACTTACCATCACTACTTTGTCCTGGGGAAATCCTCTTAATCCTTAAAGGNGCAATCCAAAATCATAATGTTCCCGTGTTACTTACTGTTACTTTTTTTTTTTCTCCTATAGTGGTTTGATGATAAGAACCCAATTTGGGCCGGGCGCGGTTGCTCACGCCTGTAATCCCAACACTTTGGGAGGCTAAGCCAGATGGATCACCTGAGGTCGGGAGTTTGAGACCATCCTGACCAACATAAAGAAGTCCTATCTCTACTAAAGACACAAAATTAGCTGGGCGTGGTGGTGCATGCCTGTATTCCAGCTACTTGGGAGGCTGAGGCAGAAGANTCGCTTGAACCCAGGAGGCGGAGGTTGCAGTGAGCCGAGATCGCGCCNTTGCACTCCAGCCTGGGCAACAAGAGCGAAATTCNGTCTTNNAAANAAAAAA | |||||||||