| mature miRNA: CCTGTAATCCTAGCACTTTGG species: Medicago truncatula database: miRNEST The numbers on the right side of the alignments show a score calculated for them. When calculating the score, a mismatch is given a score of 1, bulge: 2, and wobble: 0.5. |
| Predicted miRNA targets | |||||||||
gi|8173035|gb|AW981473.1|AW981473 EST392626 DSIL Medicago truncatula cDNA clone pDSIL-16N13, mRNA sequence CCTGTAATCCT-AGCACTTTGG EST sequence (targeted fragment marked with yellow): AGTTGAATTTATATTCTAAGTGGGTGAAATTTTCGGATGTTACCTTGTGAGGATTAACTAGTTTATTTGGTTTGGTTTGGTTTTGTGTGTGTTGAATATGGGTGCTAATTTTTCCTCATGTGTATGTGATGGAGATGAGGATTGTAGTATGAGGCCAAGGCTTGGGGATATACCAGAGAGTTGTGTGGCATTGGTGTTGATGTATTTGGATCCACCGGATATATGTAAGCTAGCACGATTGAATAGGGCGTTTCGTGATGCTTCTTTTGCCGATTTTGTTTGGGAATCGAAGTTGCCTTTGAATTATGAGTTTATCATGGGAAAAGCTTTGGAGGATGATACTACTAGTTCTAGTTCTGGTGCTGAATTAGGGAAGAGGGATATTTATGCAAGGCTTTGTAAGCCTAATTTGTTTGACAATGGAACCAAGGAAATTTGGCTAGATAAGAGGACTGGTGGGGTTTGTTTGGCAATTTCCTCCAAAGCGTTAAGGATTACAGGGATAGATGATCGCAGATATTGGAATCACATTTCAACTGAAGAGTCAAGGTTCCATACAGTTGCTTATCTTCATCAAATATGGTGGCTTGAAGTGGAAGGAGATATTGATTTCCAATTTCCAATAAGGACATACAGCGTG | |||||||||
gi|57501948|gb|CX533229.1|CX533229 s13dNF0DG04MJ024_319621 Methyl Jasmonate-Elicited Root Cell Suspension Culture Medicago trunc CCTGTAATCCTAGCACTTTGG EST sequence (targeted fragment marked with yellow): GGCACGAGGTCAGTGTCTATTACAATCCAAGCCACAAACACATGATTAGAGAAATTGAAAAATACTGCTACTTGTTAATTGGCCTTTCATCGGCTGCACTTGTATTCAATACATTGCAGCACTTCTTCTGGGATACTGTCGGCGAAAATCTGACTAAACGAGTGCGGGAGAAAATGTTGAGCGCGGTACTCAAAAATGAAATGGCATGGTTTGATCGAGAGGAAAATGAGAGTGCTAGGATTGCAGCAAGGCTAGCTCTTGATGCCAACAATGTTAGATCTGCCATTGGAGATCGGATTTCGGTAATTGTGCAGAACACTGCACTTTTGCTTGTTGCTTGTACTGCAGGGTTTGTATTGCAGTGGCGCCTTGCCCTTGTCCTCGTTGCTGTCTTCCCGGTTGTTGTTGCAGCAACCGTTTTGCAGAAAATGTTCATGACTGGTTTCTCTGGTGACTTGGAAGCCGCTCATGCTAAGGCTACACAACTAGCTGGAGAGGCTATAGCCAATGTAAGGACTGTTGCCGCCTTTAATTCGGAAAAGAAAATTGTTGGCCTTTTCGCCTCGAACCTTGAAACTCCACTACGACGCTGTTTTTGGAAGGGACAAATTTCTGGAAGT | |||||||||