| mature miRNA: GGAATGTTGGCTGGCTCGAGG species: Medicago truncatula database: miRNEST The numbers on the right side of the alignments show a score calculated for them. When calculating the score, a mismatch is given a score of 1, bulge: 2, and wobble: 0.5. |
| Predicted miRNA targets | |||||||||
gi|14871753|gb|BI267063.1|BI267063 NF100A04IN1F1053 Insect herbivory Medicago truncatula cDNA clone NF100A04IN 5', mRNA sequence GGAATGTTGGCTGGCTCGAGG EST sequence (targeted fragment marked with yellow): CTATGGGACACATACTACCTTTTTTCGAGTTAGCCAAAATTCTTGCTCAAAATGGTCACACTGTCACATTCATAAACTCCCCTAAAAACATTGATCAAATGCCCAAAACACCCAAAACACTTCAACCATTCATCAAGTTGGTAAAATCACCTTTACCATACATAGAAGAACTACAAGGTGCAGAAAGCACTCAAAATGTTCCGTTAAACCTAACTGGTTACCTTAAGTTAGCTTATGATGGTTTCCAAGACCGTGTTACTGAGATATTCAAAACTTCGAAGCCTGATTGGGTTTTCTGTGATTTAGTATCGGATTGGTTACCATCGATAGCCAAGAGTTTCAACATTCCTTGTGCGTATTACAGCATAGGCGCAGCTCGGAACTTGGTTTTCTTTAATCCACCAGGGGAACGAACCGACATAGACTTGTATAGTCCACCAAAATGGGTTCCTTTCCAAACAACCA | |||||||||
gi|7563758|gb|AW689022.1|AW689022 NF014E03ST1F1000 Developing stem Medicago truncatula cDNA clone NF014E03ST 5', mRNA sequence GGAATGTTGGCTGGCTCGAGG EST sequence (targeted fragment marked with yellow): TTCAATTGTTAATCATGAGAATGAGAACAAGAATGTCAAGTCCCTTCATGTTGTAATGGTACCATGGCTAGCTATGGGACACATACTACCTTTTTTCGAGTTAGCCAAAATTCTTGCTCAAAATGGTCACACTGTCACGTTCATAAACTCCCCTAAAAACATTGATCAAATGCCCAAAACACCCAAAACACTTCAACCATTCATCAAGTTGGTAAAATCACCTTTACCATACATAGAAGAACTACAAGGTGCAGAAAGCACTCAAAATGTTCCGTTAAACCTAACTGGTTACCTTAAGTTAGCTTATGATGGTTTCCAAGACCGTGTTACCGAGATACTCAAAACTTCGAAGCCTGATTGGGTTTTCTGTGATGTAANTATCGGATTGGTTACCGTCGATAACCAAGAGTTTCAACATTCCTTGTGCGTATTACAGCGTAGCCGCAGCTTGGAACTNGGGTTTCTTTAATCCACCAGGGGAACGAACCGACATAGACTTGT | |||||||||
gi|57496692|gb|CX527973.1|CX527973 s13dNF50D03AT030_516458 Aphid-Infected Shoots Medicago truncatula cDNA, mRNA sequence GGAATGTTGGCTGGCTCGAGG EST sequence (targeted fragment marked with yellow): GGCACGAGGCAATTGTTAATCATGAGAATGAGAACAAGAATGTCAAGTCCCTTCATGTTGTAATGGTACCATGGCTAGCTATGGGACACATACTACCTTTTTTCGAGTTAGCCAAAATTCTTGCTCAAAATGGTCACACTGTCACATTCATAAACTCCCCTAAAAACATTGATCAAATGCCCAAAACACCCAAAACACTTCAACCATTCATCAAGTTGGTAAAATCACCTTTACCATACATAGAAGAACTACAAGGTGCAGAAAGCACTCAAAATGTTCCGTTAAACCTAACTGGTTACCTTAAGTTAGCTTATGATGGTTTCCAAGACCGTGTTACTGAGATATTCAAAACTTCGAAGCCTGATTGGGTTTTCTGTGATTTAGTATCGGATTGGTTACCATCGATAGCCAAGAGTTTCAACATTCCTTGTGCGTATTACAGCATAGGCGCAGCTCGGAACTTGGTTTTCTTTAATCCACCAGGGGAACGAACCGACATAGACTTGTATAGTCCACCAAAATGGGTTCCTTTCCAAACAACCATTCATCTCAAACGTTACGAGGTTATGAGAATACAGTCAGCTGTGAAGAATGATTATGGAAGAAAATTT | |||||||||
gi|11904222|gb|BF640064.1|BF640064 NF026E05IN1F1038 Insect herbivory Medicago truncatula cDNA clone NF026E05IN 5', mRNA sequence GGAATGTTGGCTGGCTCGAGG EST sequence (targeted fragment marked with yellow): CTATGGGACACATACTACCTTTTTTCGAGTTAGCCAAAATTCTTGCTCAAAATGGTCACACTGTCACATTCATAAACTCCCCTAAAAACATTGATCAAATGCCCAAAACACCCAAAACACTTCAACCATTCATCAAGTTGGTAAAATCACCTTTACCATACATAGAAGAACTACAAGGTGCAGAAAGCACTCAAAATGTTCCGTTAAACCTAACTGGTTACCTTAAGTTAGCTTATGATGGTTTCCAAGACCGTGTTACTGAGATATTCAAAACTTCGAAGCCTGATTGGGTTTTCTGTGATTCAGTATCGGATTGGTTACCATCGATAGCCAAGAGTTTCAACATTCCTTGTGCGTATTACAGCATAGGCGCAGCTCGGAACTTGGTTTTCTTTAATCCACCAGGGGAACGAACCGACATAGACTTGTATAGTCCACCAAAATGGGTTCCTTTCCAAACAACCATTCA | |||||||||