| mature miRNA: GGAATGTTGTCTGGCTCGAGG species: Medicago truncatula database: miRNEST The numbers on the right side of the alignments show a score calculated for them. When calculating the score, a mismatch is given a score of 1, bulge: 2, and wobble: 0.5. |
| Predicted miRNA targets | |||||||||
gi|7566616|gb|AW691880.1|AW691880 NF045B06ST1F1000 Developing stem Medicago truncatula cDNA clone NF045B06ST 5', mRNA sequence GGAATGTTGTCTGGCTCGAGG EST sequence (targeted fragment marked with yellow): GTCTGATTAGTGATGAATCATCAATTTTGTTTCAAAGCTAAACTAAAACTAAAACCCTACTCTGAAATCTGAATTGTAAAAACTCAGACAAACAAACATGGCTTCTTTCCCTCCTCCTGGTTCACTCACTCTCTGCGAACTCAATCGCGAGTTAATCACCGTCGACGCTCTCTCCGACGATCGAGCCAACCAAACCTACGGAAAGCTTCTCGGATTGGTGTTCAGCCCCGTTCCATTTCAGCCACCACCACCGCCTCTCGAGACCGACGACATTTCCGAACAGAAAACAACTGAAACAACAACCGCTACCGCCTCTGAACGCCTTCCGAGAAAAGAACCTGTTGCAATCTTTCAAGGCGTTGTAAGGGATTTTCTCAGACGCCTCCTTTACCCTAATGATGTTCGTTTGTTGCCTGAGGTTAATCTTCAGGGAGTTAGTTGGCACCTTAATAAGCATATTATTGCTTTTATATCTGGGCCCGAACAGGTTTTAGTTCACGACTATGAAGATTCAGATGGGAAGGATTCGATTATTTTAACCAACGAGTCTCAGAGAGATGTTAATGTGTTAGAGTGGAGGCCTAATGGTGGGAGGATGCTTGCTGTTGGTAGCAAGAGTGGAATTTGCTTGTGGTCTGCTTCA | |||||||||
gi|20287867|gb|BQ150808.1|BQ150808 NF059F08LF1F1063 Developing leaf Medicago truncatula cDNA clone NF059F08LF 5', mRNA sequence GGAATGTTGTCTGGCTCGAGG EST sequence (targeted fragment marked with yellow): TGATTCGCCAGCTCGAAATTAACCCTCACTAAAGGGAACAAAAGCTGGAGCTCCACCGCGGTGGCGGCCGCTCTAGAACTAGTGGATCCCCCGGGCTGCAGGAATTCGGCACGAGGCTATATAAAAGAGATGCCTGTACGGCTTTAAATTGAATTTCTTTTTTATATGCCCTCCAAGATTAGGAAAAACTCCTATTCTGTTAGACTCTCAGCTCAGGGTAATGATCCATCAACCTGCTACTTCTTTGTATGAGGGACAAGTAGGAGAATGTATGCTGGAAGCGGAGGAATTACTGAAAATGCGAAAAACTATCACAAATATTTATGCACAAAGAACAGGCAAAGCTTCCTGGCAGATATACAGAGACATGGAGCGGGATCTTTTTATGTCAGCAGAAGAAGCTGAAGCCTACGGAATTGTTGATACGGTCGCAGCTTAAATCCAAAAAAAAAAAAAAAAAATTTTTTCCTCGAGGGGGGGCCCGGTACCCCAATTCGCCCTATAGTGAGTCGTATTAACAAAGTTCAACTGGGCCGGTCGGTTTTTACAACGTCCGTGGAACTGGGAAAACCCTTGGCCGTTACCCAAATCTTAATCGGCCCTTTGGCAAGACAACATTCCCCCCTTTTCGCCCAGCTGGCCGTTAAATAACCGAAAGAAAGGCCCGGCACCCAGAATTCCGCCCTTTCCAACAGTTTTGCCTCCACACCCGTGGATATGGGGCGAATGTGGCAAATTTGTGAACCCGTTACAATTATTTTTTGTAAAAATACCACAATAATATTTTTGGGTGTAAACATCAGTCTCATATATGTTATTAACACCATTTTGTGGCCGATAATTCGTGTGTCAATAGTCTGC | |||||||||
gi|260522284|gb|GT137160.1|GT137160 METBV60TF JCVI-MT3 Medicago truncatula cDNA 5', mRNA sequence GGAATGTTGTCTGGCTCGAGG EST sequence (targeted fragment marked with yellow): CCTACGGAAAGCTTCTCGGATTGGTGTTCAGCCCCGTTCCATTTCAGCCGCCACCACCGCCTCTCGAGACCGACGACATTTCCGAACAGAAAACAACTGAAACAACAACCGCTACCGCCTCTGAACGCCTTCCGAGAAAAGAACCTGTTGCAATCTTTCAAGGCGTTGTAAGGGA | |||||||||
gi|22081923|gb|AJ500990.1|AJ500990 AJ500990 MTAMP Medicago truncatula cDNA clone mtgmadc120001d11, mRNA sequence GGAATGTTGTCTGGCTCGAGG EST sequence (targeted fragment marked with yellow): TGCAGGCCATTATGGCCGGGGGTAAAAACTCAGACAAACAAACATGGCTTCTTTCCCTCCTCCTGGTTCACTCACTCTCTGCGAACTCAATCGCGAGTTAATCACCGTCGACGCTCTCTCCGACGATCGAGCCAACCAAACCTACGGAAAGCTTCTCGGATTGGTGTTCAGCCCCGTTCCATTTCAGCCACCACCACCGCCTCTCGAGACCGACGACATTTCCGAACAGAAAACAACTGAAACAACAACCACTACCGCCTCTGAACGCCTTCCGAGAAAAGAACCTGTTGCAATCTTTCAAGGCGTCGTTCGTTTGTTGCCTGAGGTTAATCTTCAGGGAGTTAGTTGGCACCTTAATAAGCATATCATTGCTTTTATATCTGGGCCCGAACAGGT | |||||||||