| mature miRNA: GGAGCCAAGGATGACTTGCCG species: Medicago truncatula database: miRNEST The numbers on the right side of the alignments show a score calculated for them. When calculating the score, a mismatch is given a score of 1, bulge: 2, and wobble: 0.5. |
| Predicted miRNA targets | |||||||||
gi|83665144|gb|DW015552.1|DW015552 EST1224513 MTY Medicago truncatula cDNA clone MTYA667, mRNA sequence GGAGCCAAGGATGACTTGCCG EST sequence (targeted fragment marked with yellow): CGGCCGGGGAGCACCACAATGCAGTGGAGGACTCACATTTGGCGGAACAAAACAACGTGCTTCTGTTGTCCGGTGATAGTTTCACCGAAAAGGCAAATCATCCTTGGCTTAATCACTTCGGTTTCGGTGTTTTCATGGTAATTGGTCACTTATTTTGTGCTTTTCATGTGTTCTTGTGAATTACTCTTTTTGAGAGAAACTTCAAAGTGTGTGCATTAGCACTTGGAACCTTTTTATTACTTTCACAAGTATTTTAAAATTGGTATTGCTTACACTTGTCTTTTGGACTGGATTGGAATAGTTTCTGCATGAAACTTTTTTTGGTTTGTGATCAATATATAATTTGCTTTGGTTTG | |||||||||
gi|9056606|gb|BE240422.1|BE240422 EST404471 MHRP- Medicago truncatula cDNA clone pMHRP-45I5, mRNA sequence GGAGCCAAGGATGACTTGCCG EST sequence (targeted fragment marked with yellow): CCTGGCTCATTACTTTGGCAAATCATCCTTGGCTCAACGTACCTTAAGTAAACTGTCTTTGTGTTTTTACACGGGATAGACTTGGTACGATTATCCTAATACAGAAGGCTACTATGTGTCTTTTTCGATGTGAAAAGAAGGCACTAAAATTATGATTCTAGTTATAAAACTTGGTATGATTATCCTGTTACAGAAGGCTATTAAGTGTCTTTTTCGGTGTGAATAAGGCACTAATTTCTAATTCTAGTTATGTGTGGTTTTAGTAATGTCTAATGTGGTGTTTTATTTATGTATTTCTGACTTTGGGGAGCAATGTATCATATAACTATGATCTGTAGATCTTTGTTGGAAAAATAAAAGCACTGGTTTGTATTTTCACT | |||||||||
gi|83664713|gb|DW015121.1|DW015121 EST1224082 MTY Medicago truncatula cDNA clone MTYA123, mRNA sequence GGAGCCAAGGATGACTTGCCG EST sequence (targeted fragment marked with yellow): CGGCCGGGGTGTCATCTTTGGCTTCATTCATGTCCAATCAAGAAACAAGTTTTGTGACTTTGGGTCAGCGGGTTTTAGCAAATCCTTTGAAAGTTCGTATGCATTATGGTCATCCTGATGTTTTTGATAGAGTCTTCCACATAACCCGCGGTGGTATCAGCAAGGCTTCCCGTGTTATCAATATTAGCGAAGATATCTACTCAGGATTCAATTCAACCTTGTGTCAAGGAAACATTACTCATCATGAATATATTCAGGTTGGTAAGGGAAGGGATGTGGGCCTCAATCAGATTGCACTATTCGAGGGGAAAGTTTCAAGTGGTAACGGTGAACAAGTCCTGAGTCGGGATATATACCGACTTGGGCAACTTTTTGATTTCTTCCGGATGATGTCTTTTTACTTCACAACAGTTGGATACTACTTTTGTACCATGTTAACGGTGCTGACAGTTTATGCCTTTCTTTATGGAAAAACGTATTTGGCACTTTCTGGTGTTGGTGAAATAATTGAAGAAAGGGCTAAGATAACCAAGAATACTGCTCTGAGTGCTGCTTTGAATACACAGTTTCTCTTCCAAATTGGTATATTCACTGCTGTGCCAATGGTCTTGGGCTTCGTTCTTGAACAAGCTTC | |||||||||