| mature miRNA: GGTGTGGCATCATCAAGATGC species: Medicago truncatula database: miRNEST The numbers on the right side of the alignments show a score calculated for them. When calculating the score, a mismatch is given a score of 1, bulge: 2, and wobble: 0.5. |
| Predicted miRNA targets | |||||||||
gi|57486988|gb|CX518462.1|CX518462 s13dNF32C06VI050_423757 Virus-Infected Leaves Medicago truncatula cDNA, mRNA sequence GGTGTGGCATCATCAAGATGC EST sequence (targeted fragment marked with yellow): GGCACGAGGCATCCTGCTATGGTTTTGAAAATGGAAGATGGGTCTGACTTACTTCTACCTATAATTGTTTTGGAGATGCCAAGCGTCTTACTACTGGCAGCAGTACGCAATGTTTCAATTGCTAGGCCTACATTATATGAAGTAGTGATGGAGATGATCGGCAAAATGGGTTACCAAGTCAAACTTGTCAGAGTTACTAGGAGAGTCGATGAGGCATATTTTGCTCAGTTGTATCTTACCAAGGTTGGAAATGAGGCAGAGTGTAGGAGCTTTGACCTTCGACCTTCTGATGCTATCAATATTGCAGTAAGATGCAAGGTGCCAATACAAGTCAACAAGTACTTGGCGTCCAGTGATGGAATGAGAGTAATTGAATCAGGCAAATTGCCAACGCAGATCCCTAGTTTTGATGGTCGATTATTTACTGAAATGGACAAGCCAAATGGTCAACCTTGTGCTGAAACCGATGAATTTAATCTTTTGAACAACATGTTGAAAGCTGTTGATGAAGAGCGTTATGATGATGCCGCATTGTGGAGGGACAGACTTAATCAACATAGGGCTGGTAA | |||||||||
gi|157984043|gb|EX532315.1|EX532315 MTGland_B034_2007-06-23/MTGlandB034_H06_017_1 Medicago truncatula A17 glandular trichome Med GGTGTGGCATCATCAAGATGC EST sequence (targeted fragment marked with yellow): TAAGTTCAAAAGAATGTAATGGAACACATTCCCTTTACGTCGCTACTCATCTTATATGAGGTCATTCAATGTGAAAATATATATAGTTGATTTAGTAGAATACTAGTGTTCTGTTCTCTTCATTCTTTTGAGTTTTCAAAGACTGCGCAAATCCCTACACTAAGTATAAGACACTTTAATACCAACATTTTGAGAAAACTTTCAAGAATATAATTAAAACTCAACATCATGATGATGCCACATATTTAGGGAGAATGTAATGTAACGTAGATGAAATTAAAACTAAATAAAATTGTGTATTTTTTTGAATTGATTTCGTGCTCTTGTGCAACTTTATTCGAATTTATTCAATACACAACTTTATTCAAATTGATTCAATGCGCAACTTTATTCAATACCAAAATGCGCAACATATC | |||||||||
gi|13602904|gb|BG587840.1|BG587840 EST489615 KV3 Medicago truncatula cDNA clone pKV3-13E8 5' end, mRNA sequence GGTGTGGCATCATCAAGATGC EST sequence (targeted fragment marked with yellow): GATTGGGTTATGCATGAGTACACCATGGATGAAGATGAGCTTAGGACATGCCGTGATGTTAAGGACTATTATGCACTTTACAAGGTTTTCAAGAAAAGTGGACCGGGTCCTAAGAACGGTGAGCAGTATGGTGCACCATTTAAAGAAGAAGAATGGGCAGATGATGATGTTGTAGATTTTAATGTAAATTCAGTTGACCGGGAGGTTCCAGAGGCTGCTATTGACAATGTTATTGATCAGCATCAGCTGCAGCCGTTGTTTGATGATGAAATTGATGAAATCATTAAAGGGATGCTTGATGTTGAGCCTGTCCTTGACCAGCAACATGTGAATGGTTATGTTGACTTTCCTCAGGTTGATGATGAAGAAACACGAAATGTGGTCATGGATCAATTCTACGAGGCCATGGTATTCCCTGATCCAAGTGAAAAACAGCAATCTAACAGTCAGCTTTATGATGCCGCACCCCA | |||||||||
gi|11931039|gb|AW686321.2|AW686321 NF036E10NR1F1000 Nodulated root Medicago truncatula cDNA clone NF036E10NR 5', mRNA sequence GGTGTGGCATCATCAAGATGC EST sequence (targeted fragment marked with yellow): ATTGCCACATCTATTTAATATCAAAGAGAGAAAGAAGAAGAAAAAGAAGAAAAAGACGAAGGCAAATAAAGAGAGCGAAAGCGTTGCTGATGATTCTGCTACAGCAGCAAATCATGAAGGTGGTGGTGGTAGTACCAGCAGTGGTGCTAACCCTAAGATTTCTTTGTTTGATATCTCTGCCGAGAATTTCTTTGAAGACATGGACACCATTGCCAAACTCTGCGGGGAAGAAGAACGCAACATCGCTGTTGAGCAAAGCGAGATCAAGAGAATGTTTTCTTCTGTCACTTTTTTAAGAGAATGGAAGGATTTTAAATATCCATCTAAAAGCATTAGGTTTTCTTACGGAATTGGGAGCTCTGAGTGTTATGAGAGAAATGATATCAAAGATGACATAAACTTACCTCAGTTTTCATCTGCCACCGTTCCTAAGCATAATATGCAAAAGGAGGAGCAACTTGGGGATGCCAAACCTCAAGAATCCAAAGACTTTGTGATGAATGTTGGAGGTTCTGTATGGGCATTAGATTGGTGTCCTAGGATGCATGGGGAGCCTGATTGTTCAATTAAAATGTGAGTTCATTGCTGTTGCTGCTCATCCACCCTGGTTCATCTTATCACAAAATGGGCGCCTC | |||||||||