miRNEST 2.0: an integrative microRNA resource miRNEST 2.0, an integrative microRNA resource :: Browse




mature miRNA: TGCCAAAGGAGATTTGCCCAG
species: Medicago truncatula
database: miRNEST
The numbers on the right side of the alignments show a score calculated for them.
When calculating the score, a mismatch is given a score of 1, bulge: 2, and wobble: 0.5.

Predicted miRNA targets
gi|13779528|gb|BG644416.1|BG644416 EST506035 KV3 Medicago truncatula cDNA clone pKV3-37A6 5' end, mRNA sequence

TGCCAAAGGAGATTTGCCCAG
||||||||.|||||||||| |
ACGGTTTCTTCTAAACGGG-C

EST sequence (targeted fragment marked with yellow):
AAAACAGAAAAATATCTCATAATTTTAGCTACTAGCTGGTTTATATTTGTTGTTTGAAGTGTTTCGTTCTGTGAAATATTTCATTCGCAATTGGGCATATCTCCTTTGGCACTTTGGAGTCCTTGATTGATTCCTATTATCCTGGCGGGCAAATCTTCTTTGGCATCAGATCTCTGGTTTCAGTAGTTGAGATAATCTTCCGGAGATACTGAATATCAAATGCATCTGCCCAGTATAAACTGAACGTGATGTTTAATTTTCAGGACTTGTTAAATGGTGATGGTAGAAAAGAGAATTATGAACAGAATCTTGAGTGTAGTTCCTTTTTCCTTCCACGAGTGGCCTTTGAACTTTTCTCCAGTGTTAAATCCAGCATATTCCAAACACTTGGTGGAACTTCCATTTCAGGAGCATTTTCCTCATTGCAATCTCTATTGACCCAAACAGACTCTATTTATGTTCGTGTGTTTGAAGAAAGAATGGATCTCATGCGAGCAGTAATTGTTGGTGCATCTGGAACTCCGTATCATGACGGGTTGTTCTTCTTTGATATATGTTTCCCTCCAGAGTATCCTAACGAACCACCAGTAAGCTTTTAAGTGTAGTTTGCAGTGCTTGTATTTTTTTTTTACAGCACCATTGTTTATAAGGCCCTTCACTTATGTTCAAGATCTCTAGATAAAAGCTCCAACTCTGAACAAACTCTAATGTTATCAATGTGATCTTTGAATGCAGATGGTGCACTACAATTCTGGCGGGCTCCGCTTAAATCCTAATTTATATGAATCAGGGGAAATCT



gi|260525529|gb|GT140839.1|GT140839 METBL11TR JCVI-MT3 Medicago truncatula cDNA 3', mRNA sequence

TGCCAAAGGAGATTTGCCCAG
|||||||||||||||| ||||
ACGGTTTCCTCTAAACAGGTC

EST sequence (targeted fragment marked with yellow):
TCCTTCTTCAAATATTTACCCTTAACAAATTCTTGGTAGTTTTTTTTTTTAAGCTAACAGCAAATGATGGAGTTTCTTTGGTGCATACCTTTACTAGCTTATGCTGGTCCAACCATTTCAGAGGTTCAATAGAAATGATGTGGTTATTGAAGCCCTTTTGCCTACTTGCTGTGAATCAAGAAGCAGAATATATTTCTGTTGAATGGCTAAGAATTCCTGATTAAATATTAGCCATTCTCCCTTGGCACCAAGTAGACCTGATAGAGTTTTAGGCTTTGTAGTGTGGGCAAATTTCCTTTGGCAATCTCGGAAAAGGAAAATTTCATTCCTTTTTGCTATTCATGTATGTTTTAAGATTCCTGTGTACTGGACAAATCTCCTTTGGCAAAAGTTACTGAATTTCCTTTGGTTGGATTCAGGTAGTAAAAGTATATGAGAAACATTTTTTCCTTATGTTATAAAATATTATCATTCAGAAGTAACTATTGGAACTCCACCTATTCTGGAGGCAAATCTCCTTTGGCATCTTTTAATTATCTTCAACTGCTTCATCTAACACTAGAAATTTTCCTTCCATCAAGCTACCCCGTGAAACCGAGAAAAAAAAAAAAAAAAAAAAA



gi|13373791|gb|BG454997.1|BG454997 NF112E08LF1F1056 Developing leaf Medicago truncatula cDNA clone NF112E08LF 5', mRNA sequence

TGCCAAAGGAGATTTGCCCAG
||||||||||||||||||| .
ACGGTTTCCTCTAAACGGGCT

EST sequence (targeted fragment marked with yellow):
AATGGTTCCAAAGTTCAGTGGTGGCGTTGATGATGATGGTGGAACTGGGCGTGGAACTAAGCCTATCTGAATTAACAACACAACCCACCTTTTCAAACTGTAAAAAAAATCAAATTTTTAGTTTCAACTTGTTATGTTATGTTCATTTTTCGAGTGTTTAAAATCATGGGCTATCTTGGTTTCTTAGCTTGGCTCTATAAACTCTAATTCTAGCTTTTATGGGACCAACCTTCGTGGTGGTCCAAATGGTTCAAAAGAAATGATCTGGTATTAAAAGCTCTTTCGACTTTTGGCAATTGCAGTCGTGTTTTGAATCGGACTTTGTTCTGTCAGAAAGTATATGTTTGATTTGTTTTCTGATGATATTCTTGATTTCAACTTCAAAATTTTGTTGATTCTGGATATCGATCAATCTCCCTTAATACCAGATAGATCTGGTAGAGTGTTTAGCTTCACCGTGGGGCAAATCTCCTTTGGCAATATAGTTTCTGAGTCTCAATCTTGGAAGAGGCAAATTTGTTAACTACTATCTGGAAATTACTTATGTTTGAAGATTCAGCTGTATCGGGCAAATCTCCTTTGGCAAAAGTTACTTAATTTTCTTTGNGTTGATTCTTAACATATCAAAATAGTAGTTTTCATCTTCTATGAAAGTATCACCT



gi|13783492|gb|BG648380.1|BG648380 EST509999 HOGA Medicago truncatula cDNA clone pHOGA-19J15 5' end, mRNA sequence

TGCCAAAGGAGATTTGCCCAG
||||||||||||||||||||.
ACGGTTTCCTCTAAACGGGTT

EST sequence (targeted fragment marked with yellow):
ATAATAGACTCCGTTATCCCTGTCCTGTTGGGCAAATCTCCTTTGGCATTTAATTTTTCAGTTTCAGTGGTGAAGGTATTCTTTCTTTTCAAGAAACTGGCTTTGTATCTGTGACAAGCATAGGTATCAATCAGACACATTTTGTATTATATACAGAATATCCTCTGAAGTTGGTATCGACTCATCCGTTGTTGATTGCAATACATACGGACTCTGGTGTTTAATGTTTCTACTAGCTTGGAAAGGCATATAGTTGATGGAAGCTCAGATGACTGATTCAGACTGGGAGTCTTCCAGTGAGAGCAGCGGCAGTGACGATCAAGAGGATATTGATTTTCTCTATGGTGGCCAAGCTCAGAGCATATTATCAAGTTTAGAGGAAAGCATCGGTAGGATAAATGATTTCCTCTCATTCGAGAGAACATTTGCATACGGCGATGTTGTGTGCTCCTTGTCAGACCCATCTGGACAGATGGGGAGGGTCGTAAGTGTTGACGTGTTAGTGGATTTGGAAAACATTCAAGGAAATGTATTAAAAAATGTGAACTCCAAGAAACTTCTGAAGATTCGTTCCATTTCGGAAGGTGATTGCGTAATTAACGGTCCGTGGCTTGGTCAGGTTCAAAGGGTGGTGGACAGATTAAGTGTATTGTTTGATGACGGGACTAAGTACGAGATCACTACCTTGGAAAATGATAAGATTTTAGCACAAAATCCTAATTTTCTTGAAGATTTGCAGTATCCATACTATCCAGGGCAGAGAGTGAAGGTTAAGTTCTCGACCGCTTCTAAATCAGCTAGATGGCT



gi|260525529|gb|GT140839.1|GT140839 METBL11TR JCVI-MT3 Medicago truncatula cDNA 3', mRNA sequence

TGCCAAAGGAGATTTGCCCAG
||||||||||||||||||
ACGGTTTCCTCTAAACGGAGG

EST sequence (targeted fragment marked with yellow):
TCCTTCTTCAAATATTTACCCTTAACAAATTCTTGGTAGTTTTTTTTTTTAAGCTAACAGCAAATGATGGAGTTTCTTTGGTGCATACCTTTACTAGCTTATGCTGGTCCAACCATTTCAGAGGTTCAATAGAAATGATGTGGTTATTGAAGCCCTTTTGCCTACTTGCTGTGAATCAAGAAGCAGAATATATTTCTGTTGAATGGCTAAGAATTCCTGATTAAATATTAGCCATTCTCCCTTGGCACCAAGTAGACCTGATAGAGTTTTAGGCTTTGTAGTGTGGGCAAATTTCCTTTGGCAATCTCGGAAAAGGAAAATTTCATTCCTTTTTGCTATTCATGTATGTTTTAAGATTCCTGTGTACTGGACAAATCTCCTTTGGCAAAAGTTACTGAATTTCCTTTGGTTGGATTCAGGTAGTAAAAGTATATGAGAAACATTTTTTCCTTATGTTATAAAATATTATCATTCAGAAGTAACTATTGGAACTCCACCTATTCTGGAGGCAAATCTCCTTTGGCATCTTTTAATTATCTTCAACTGCTTCATCTAACACTAGAAATTTTCCTTCCATCAAGCTACCCCGTGAAACCGAGAAAAAAAAAAAAAAAAAAAAA



gi|27811035|gb|CB065457.1|CB065457 EST645138 HOGA Medicago truncatula cDNA clone HOGA-19E23, mRNA sequence

TGCCAAAGGAGATTTGCCCAG
|||||||||||||||| || .
ACGGTTTCCTCTAAACAGGAT

EST sequence (targeted fragment marked with yellow):
GAGAGAAAAAAAAAGTGTCTCTAAATATGGTTCCAAAGTTCAGTGGTGGCGTTGATGATGATGGTGGAACTGGGCGTGGAACTAAGCCTATCTGAATTAACAACACAACCCACCTTTTCAAACTGTAAAAAAAATCAAATTTTTAGTTTCAACTTGTTATGTTATGTTCATTTTTCGAGTGTTTAAAATCATGGGCTATCTTGGTTTCTTAGCTTGGCTCTATAAACTCTAATTCTAGCTTTTATGGGACCAACCTTCGTGGTGGTCCAAATGGTTCAAAAGAAATGATCTGGTATTAAAAGCTCTTTCGACTTTTGGCAATTGCAGTCGTGTTTTGAATCGGACTTTGTTCTGTCAGAAAGTATATGTTTGATTTGTTTTCTGATGATATTCTTGATTTCAACTTCAAAATTTTGTTGATTCTGGATATCGATCAATCTCCCTTAATACCAGATAGATCTGGTAGAGTGTTTAGCTTCACCGTGGGGCAAATCTCCTTTGGCAATATAGTTTCTGAGTCTCAATCTTGGAAGAGGCAAATTTGTTAACTACTATCTGGAAATTACTTATGTTTGAAGATTCAGCTGTATCGGGCAAATCTCCTTTGGCAAAAGTTACTTAATTTTCTTTGTGTTGATTCTTAGCATATCAAAATAGTAGTTTTCATCTTCTATGAAAGTATCACCTTTCTAAAGTTATTCCACACTTTCACTAGGACAAATCTCCTTTGGCATCTTTTGATTATCTTAGTCGGTTTCCTCAACCT



gi|57563941|gb|CX538356.1|CX538356 s13dNF80D11GS090_459964 Germinating Seed Medicago truncatula cDNA, mRNA sequence

TGCCAAAGGAGATTTGCCCAG
||||||| ||||||||||| .
ACGGTTTACTCTAAACGGGGT

EST sequence (targeted fragment marked with yellow):
GCTTAAACTCCATTTTCACATTAGAGTGAACAAAAAAAAACAAGTGTCTCTGAAATGGTTTCCAAGTTCAATGGTGGCGTTGACGATGGTGGAACTGGGCGTGGAACCAAGCCTATCTGAATTAACAACACAACCCATCTTTTGAAACTGTAAAAAGATCAAATTTTTAGTTTCAACTTGTTATGTTATGTTCATATTTTGCTGTTTAAAATCATGGGCTATCTTGGTTTCTTAGCTTGGCTCTATAAACTCTAATTCTAGCTTTTATGGGACCAACCTTCTTGGTGGTCCAAATGGTTCAAAAGAAATGATCTGGTATTAAAAGCTCTTTCGACTTTTGGCAATTGCAGTCGTGTTTTGAATCAGACTTTCTTCTGTCAGAAAGTATATGTTTGATCTGTTTTCTGATGATATTCTTGATTTCAACTTCAAAACTTTGTTGATTCTGGATATCAATCAATCTCCCTTAATACCAGATAGATCTGGTAGAGTGTTTAGCTTCACCGTGGGGCAAATCTCATTTGGCAATATAGTTTCTGAGTCTCAATCTTGGAAGAGGCAAATTTGTTAACTAGTATCTGGAAATTACTTATGTTTGAAGATTCACCTGTATCGGGNCAATCTCCTTTGGCAAAAGTTACTTA



gi|7566618|gb|AW691882.1|AW691882 NF045B07ST1F1000 Developing stem Medicago truncatula cDNA clone NF045B07ST 5', mRNA sequence

TGCCAAAGGAGATTTGCCCAG
||||||||||||||||||| .
ACGGTTTCCTCTAAACGGGCT

EST sequence (targeted fragment marked with yellow):
CTTCACAAACAGAGAGAGAGAGAGAAAAAAAAAGTGTCTCTAAAATGGTTCCAAAGTTCAGTGGTGGCGTTGATGATGATGGTGGAACTGGGCGTGGAACTAAGCCTATCTGAATTAACAACACAACCCACCTTTTCAAACTGTAAAAAAAATCAAATTTTTAGTTTCAACTTGTTATGTTATGTTCATTTTTCGAGTGTTTAAAATCATGGGCTATCTTGGTTTCTTAGCTTGGCTCTATAAACTCTAATTCTAGCTTTTATGGGACCAACCTTCGTGGTGGTCCAAATGGTTCAAAAGAAATGATCTGGTATTAAAAGCTCTTTCGACTTTTGGCAATTGCAGTCGTGTTTTGAATCGGACTTTGTTCTGTCAGAAAGTATATGTTTGATTTGTTTTCTGATGATATTCTTGATTTCAACTTCAAAATTTTGTTGATTCTGGATATCGATCAATCTCCCTTAATACCAGATAGATCTGGTAGAGTGTTTAGCTTCACCGTGGGGCAAATCTCCTTTGGCAATATAGTTTCTGAGTCTCAATCTTGGAAGAGGCAAATTTGTTAACTACTATCTGGAAATTACTTATGTTTTGAAGATTCAAGCTGTATCGGGCAAATCTCCTTTGGCAAAAGTTACTTAATTTTCTTTGGTGTT



gi|33105142|gb|CF068483.1|CF068483 EST669204 MTUS Medicago truncatula cDNA clone MTUS-8E11, mRNA sequence

TGCCAAAGGAGATTTGCCCAG
||||||||||||||||||| .
ACGGTTTCCTCTAAACGGGCT

EST sequence (targeted fragment marked with yellow):
CAAAGTTCAGTGGTGGCGTTGATGATGATGGTGGAACTGGGCGTGGAACTAAGCCTATCTGAATTAACAACACAACCCACCTTTTCAAACTGTAAAAAAAATCAAATTTTTAGTTTCAACTTGTTATGTTATGTTCATTTTTCGAGTGTTTAAAATCATGGGCTATCTTGGTTTCTTAGCTTGGCTCTATAAACTCTAATTCTAGCTTTTATGGGACCAACCTTCGTGGTGGTCCAAATGGTTCAAAAGAAATGATCTGGTATTAAAAGCTCTTTCGACTTTTGGCAATTGCAGTCGTGTTTTGAATCGGACTTTGTTCTGTCAGAAAGTATATGTTTGATTTGTTTTCTGATGATATTCTTGATTTCAACTTCAAAATTTTGTTGATTCTGGATATCGATCAATCTCCCTTAATACCAGATAGATCTGGTAGAGTGTTTAGCTTCACCGTGGGGCAAATCTCCTTTGGCAATATAGTTTCTGAGTCTCAATCTTGGAAGAGGCAAATTTGTTAACTACTATCTGGAAATTACTTATGTTTGAAGATTCAGCTGTATCGGGCAAATCTCCTTTGGCAAAAGTTACTTAATTTTCTTTGTGTTGATTCTTAGCATATCAAAATAGTAGTTTTCATCTTCTATGAAAGTATCACCTTTCTAAAGTTATCCACACTTTCACTAGGACAAATCTCCTTTGGCATCCTTTGATTATCTTAGTCGGTTTCCTCAA



gi|57563941|gb|CX538356.1|CX538356 s13dNF80D11GS090_459964 Germinating Seed Medicago truncatula cDNA, mRNA sequence

TGCCAAAGGAGATTTGCCCAG
|||||||||||||| ||| .
ACGGTTTCCTCTAACNGGGCT

EST sequence (targeted fragment marked with yellow):
GCTTAAACTCCATTTTCACATTAGAGTGAACAAAAAAAAACAAGTGTCTCTGAAATGGTTTCCAAGTTCAATGGTGGCGTTGACGATGGTGGAACTGGGCGTGGAACCAAGCCTATCTGAATTAACAACACAACCCATCTTTTGAAACTGTAAAAAGATCAAATTTTTAGTTTCAACTTGTTATGTTATGTTCATATTTTGCTGTTTAAAATCATGGGCTATCTTGGTTTCTTAGCTTGGCTCTATAAACTCTAATTCTAGCTTTTATGGGACCAACCTTCTTGGTGGTCCAAATGGTTCAAAAGAAATGATCTGGTATTAAAAGCTCTTTCGACTTTTGGCAATTGCAGTCGTGTTTTGAATCAGACTTTCTTCTGTCAGAAAGTATATGTTTGATCTGTTTTCTGATGATATTCTTGATTTCAACTTCAAAACTTTGTTGATTCTGGATATCAATCAATCTCCCTTAATACCAGATAGATCTGGTAGAGTGTTTAGCTTCACCGTGGGGCAAATCTCATTTGGCAATATAGTTTCTGAGTCTCAATCTTGGAAGAGGCAAATTTGTTAACTAGTATCTGGAAATTACTTATGTTTGAAGATTCACCTGTATCGGGNCAATCTCCTTTGGCAAAAGTTACTTA



gi|13779528|gb|BG644416.1|BG644416 EST506035 KV3 Medicago truncatula cDNA clone pKV3-37A6 5' end, mRNA sequence

TGCCAAAGGAGATTTGCCCAG
||||||||||||| ||||||.
ACGGTTTCCTCTATACGGGTT

EST sequence (targeted fragment marked with yellow):
AAAACAGAAAAATATCTCATAATTTTAGCTACTAGCTGGTTTATATTTGTTGTTTGAAGTGTTTCGTTCTGTGAAATATTTCATTCGCAATTGGGCATATCTCCTTTGGCACTTTGGAGTCCTTGATTGATTCCTATTATCCTGGCGGGCAAATCTTCTTTGGCATCAGATCTCTGGTTTCAGTAGTTGAGATAATCTTCCGGAGATACTGAATATCAAATGCATCTGCCCAGTATAAACTGAACGTGATGTTTAATTTTCAGGACTTGTTAAATGGTGATGGTAGAAAAGAGAATTATGAACAGAATCTTGAGTGTAGTTCCTTTTTCCTTCCACGAGTGGCCTTTGAACTTTTCTCCAGTGTTAAATCCAGCATATTCCAAACACTTGGTGGAACTTCCATTTCAGGAGCATTTTCCTCATTGCAATCTCTATTGACCCAAACAGACTCTATTTATGTTCGTGTGTTTGAAGAAAGAATGGATCTCATGCGAGCAGTAATTGTTGGTGCATCTGGAACTCCGTATCATGACGGGTTGTTCTTCTTTGATATATGTTTCCCTCCAGAGTATCCTAACGAACCACCAGTAAGCTTTTAAGTGTAGTTTGCAGTGCTTGTATTTTTTTTTTACAGCACCATTGTTTATAAGGCCCTTCACTTATGTTCAAGATCTCTAGATAAAAGCTCCAACTCTGAACAAACTCTAATGTTATCAATGTGATCTTTGAATGCAGATGGTGCACTACAATTCTGGCGGGCTCCGCTTAAATCCTAATTTATATGAATCAGGGGAAATCT



gi|33105142|gb|CF068483.1|CF068483 EST669204 MTUS Medicago truncatula cDNA clone MTUS-8E11, mRNA sequence

TGCCAAAGGAGATTTGCCCAG
||||||||||||||||||| .
ACGGTTTCCTCTAAACGGGGT

EST sequence (targeted fragment marked with yellow):
CAAAGTTCAGTGGTGGCGTTGATGATGATGGTGGAACTGGGCGTGGAACTAAGCCTATCTGAATTAACAACACAACCCACCTTTTCAAACTGTAAAAAAAATCAAATTTTTAGTTTCAACTTGTTATGTTATGTTCATTTTTCGAGTGTTTAAAATCATGGGCTATCTTGGTTTCTTAGCTTGGCTCTATAAACTCTAATTCTAGCTTTTATGGGACCAACCTTCGTGGTGGTCCAAATGGTTCAAAAGAAATGATCTGGTATTAAAAGCTCTTTCGACTTTTGGCAATTGCAGTCGTGTTTTGAATCGGACTTTGTTCTGTCAGAAAGTATATGTTTGATTTGTTTTCTGATGATATTCTTGATTTCAACTTCAAAATTTTGTTGATTCTGGATATCGATCAATCTCCCTTAATACCAGATAGATCTGGTAGAGTGTTTAGCTTCACCGTGGGGCAAATCTCCTTTGGCAATATAGTTTCTGAGTCTCAATCTTGGAAGAGGCAAATTTGTTAACTACTATCTGGAAATTACTTATGTTTGAAGATTCAGCTGTATCGGGCAAATCTCCTTTGGCAAAAGTTACTTAATTTTCTTTGTGTTGATTCTTAGCATATCAAAATAGTAGTTTTCATCTTCTATGAAAGTATCACCTTTCTAAAGTTATCCACACTTTCACTAGGACAAATCTCCTTTGGCATCCTTTGATTATCTTAGTCGGTTTCCTCAA



gi|20281110|gb|BQ144051.1|BQ144051 NF028G06DT1F1049 Drought Medicago truncatula cDNA clone NF028G06DT 5', mRNA sequence

TGCCAAAGGAGATTTGCCCAG
||||||||||||||||||||.
ACGGTTTCCTCTAAACGGGTT

EST sequence (targeted fragment marked with yellow):
TGATACGCCAGCTCGAAATTAACCCTCACTAAAGGGAACAAAAGCTGGAGCTCCACCGCGGTGGCGGCCGCTCTAGAACTAGTGGATCCCCCGGGCTGCAGGAATTCGGCACGAGGAATTCGGAGTCATAATAGACTCCAGTTATCCCTGTCCTGTTGGGCAAATCTCCTTTGGCATTTAATTTTTCAGTTTCAGTGGTGAAGGTATTCTTTCTTTTCAAGAAACTGGCTTTGTATCTGTGACAAGCATAGGTATCAATCAGACACATTTTGTATTATATACAGAATATCCTCTGAAGTTGGTATCGACTCATCCGTTGTTGATTGCAATACATACGGACTCTGGTGTTTAATGTTTCTACTAGCTTGGAAAGGCATATAGTTGATGGAAGCTCAGATGACTGATTCAGACTGGGAGTCTTCCAGTGAGAGCAGCGGCAGTGACGATCAAGAGGATATTGATTTTCTCTATGGTGGCCAAGCTCAGAGCATATTATCAAGTTTAGAGGAAAGCATCGGTAGGATAAATGATTTCCTCTCATTCGAGAGAACATTTGCATACGGCGAGGGGGGGCCCGGTACCCATTCGCCCTATAGTGAGTCGTATTACCAATTCACTGGGCCGTCGGTTTACAACGTCGGGACTGGGAAAACCCTTGGCGTTACCCAACCTAATCGGCCTTGCAGCACATTCCCCCTTTCCCAGCCTGGGGTAAATAAGGAGAAAGAGGCCCGCCCCGATTCCGCCCTTCCAAACCAGGGTGGGCCACCCCTGAAATGGGCGAAATGGGCACACTTGGTACAACCCTTAATACATCTTGTTAAAATTCGCGG



gi|151386387|gb|EV256265.1|EV256265 MTYCU84TF JCVI-MT1 Medicago truncatula cDNA 5', mRNA sequence

TGCCAAAGGAGATTTGCCCAG
|||||||.|||||.|. |||
ACGGTTTTCTCTAGATTGGTG

EST sequence (targeted fragment marked with yellow):
GATAAAGAAAGTGTAAAATAAGAAGAAAGGAAAGGGTGGTGAGTGATGGAAGAAGGCCTAGTTTGCCAGTGGAGCGTGGTTAGATCTCTTTTGGCAATTCTTCAATGGTGGGCTTTCAATGTCACTGTCATTATCATGAACAAATGGATCTTTCAGAAATTGGATTTCAAGTTTCCCCTATCGGTATCCTGTATCCACTTTATCTGCTCAGCCATTGGAGCATATGTGGTAATTAAAGTGCTGAAGCTTAAACCACTCATATCTGTTGACCCTCAAGATCGCTGGAGAAGAATCTTTCCTATGTCATTTGTGTTCTGTATTAATATAGTTTTGGGGAATGTGAGCCTACGCTACATACCAGTTTCTTTTATGCAAACAATAAAGTCATTCACTCCTGCAACAACAGTTGTTTTGCAGTGGCTAGTATGGAGAAAATATTTTGACTGGCGTATTTGGGCTTCTCTCGTACCCATTGTTGGAGGAATTCTTCTGACATCTATTACAGAGCTTAGTTTTAACATGTTCGGATTTTGTGCTGCCTTATTTGGCTGTTTGGCTACTTCTACAAAGACTATCCTTGCAGAGGCTCTGTTGCATGGTTACAAATTTGACAGCATAAATACAGTTTATCACATGGCACCTTTTGCAACCTTGATCATGTGTTTCCTGCTTTGTACT



gi|20276530|gb|BQ140404.1|BQ140404 NF035C06PH1F1050 Phoma-infected Medicago truncatula cDNA clone NF035C06PH 5', mRNA sequence

TGCCAAAGGAGATTTGCCCAG
|||||||.|||||.|. |||
ACGGTTTTCTCTAGATTGGTG

EST sequence (targeted fragment marked with yellow):
AACAAATGACATAAAAGATTGAGAAGTGTAAGAAACAAAAAAGAGGTACAATATCTAATTTCTTCAATCAAGCCTTCATCAATTCATTGATTCATTCCTTCACCGTTACAATTCACAAATAACAACAAAACAAAAAAAACTCTCTTATATATTAAATCTGGTGTTGTTGTAAAGAAAGAATAAAGAAAGTGTAAAATAAGAAGAAAGGAAAGGGTGGTGAGTGATGGAAGAAGGCCTANTTTGCCAGTGGAGCGTGGTTAGATCTCTTTTGGCAATTCTTCAATGGTGGGCTTTCAATGTCACTGTCATTATCATGAACAAA



gi|33105142|gb|CF068483.1|CF068483 EST669204 MTUS Medicago truncatula cDNA clone MTUS-8E11, mRNA sequence

TGCCAAAGGAGATTTGCCCAG
|||||||||||||||| || .
ACGGTTTCCTCTAAACAGGAT

EST sequence (targeted fragment marked with yellow):
CAAAGTTCAGTGGTGGCGTTGATGATGATGGTGGAACTGGGCGTGGAACTAAGCCTATCTGAATTAACAACACAACCCACCTTTTCAAACTGTAAAAAAAATCAAATTTTTAGTTTCAACTTGTTATGTTATGTTCATTTTTCGAGTGTTTAAAATCATGGGCTATCTTGGTTTCTTAGCTTGGCTCTATAAACTCTAATTCTAGCTTTTATGGGACCAACCTTCGTGGTGGTCCAAATGGTTCAAAAGAAATGATCTGGTATTAAAAGCTCTTTCGACTTTTGGCAATTGCAGTCGTGTTTTGAATCGGACTTTGTTCTGTCAGAAAGTATATGTTTGATTTGTTTTCTGATGATATTCTTGATTTCAACTTCAAAATTTTGTTGATTCTGGATATCGATCAATCTCCCTTAATACCAGATAGATCTGGTAGAGTGTTTAGCTTCACCGTGGGGCAAATCTCCTTTGGCAATATAGTTTCTGAGTCTCAATCTTGGAAGAGGCAAATTTGTTAACTACTATCTGGAAATTACTTATGTTTGAAGATTCAGCTGTATCGGGCAAATCTCCTTTGGCAAAAGTTACTTAATTTTCTTTGTGTTGATTCTTAGCATATCAAAATAGTAGTTTTCATCTTCTATGAAAGTATCACCTTTCTAAAGTTATCCACACTTTCACTAGGACAAATCTCCTTTGGCATCCTTTGATTATCTTAGTCGGTTTCCTCAA



gi|13781151|gb|BG646039.1|BG646039 EST507658 KV3 Medicago truncatula cDNA clone pKV3-48E12 5' end, mRNA sequence

TGCCAAAGGAGATTTGCCCAG
||||||||||||||||||||.
ACGGTTTCCTCTAAACGGGTT

EST sequence (targeted fragment marked with yellow):
TCTCCTTTGGCAATTCGGAGTCATAATAGACCTCCAGTTATCCCTGTCCTGTTGGGCAAATCTCCTTTGGCATTTAATTTTTCAGTTTCAGTGGTGAAGGTATTCTTTCTTTTCAAGAAAACTGGCTTTGTATCTGTGACAAGCATAGGTATCAATCAGACACATTTTGTATTATATACAGAATATCCTCTGAAGTTGGTATCGACTCATCCGTTGTTGATTGCAATACATACGGACTCTGGTGTTTAATGTTTCTACTAGCTTGGAAAGGCATATAGTTGATGGAAGCTCAGATGACTGATTCAGACTGGGAGTCTTCCAGTGAGAGCAGCGGCAGTGACGATCAAGAGGATATTGATTTTCTCTATGGTGGCCAAGCTCAGAGCATATTATCAAGTTTAGAGGAAAGCATCGGTAGGATAAATGATTTCCTCTCATTCGAGAGAACATTTGCATACGGCGATGGTTGTGTGCTCCTTGTCAGACCCATCTGGACAGATGGGGGAGGGGGTCGTAAGTGTTGACCGTGTTAGTGGAATTTGGAAAACATTCAAGGGAAATGTATTAAAAAATGTGAACTCCAAGAAACTTCTGAAGATTCGTTCCATTTCGGAAGGTGATTGCGTAATTAACGGTCCGTGGCTTGGTCAGGTTCAAGGGGTGTGG