| mature miRNA: TGCCTGGCTCCCTGAATGCCA species: Medicago truncatula database: miRNEST The numbers on the right side of the alignments show a score calculated for them. When calculating the score, a mismatch is given a score of 1, bulge: 2, and wobble: 0.5. |
| Predicted miRNA targets | |||||||||
gi|14883236|gb|BI273231.1|BI273231 NF097C02FL1F1017 Developing flower Medicago truncatula cDNA clone NF097C02FL 5', mRNA sequenc TGCCTGGCTCCCTGAATGCCA EST sequence (targeted fragment marked with yellow): CCATTGTTGAGTTACAGTACTTTTCCTGCTGGCATGCAGGGAGCCAGGCATGATCTATTTTCCGTTTCAAGTTTTTCCAACTTTCCAGGTGATAACTTCCGTCTTTGTATGGGTAACTCCTTTGGCAGCAACACAGTGCCGGGGTTGAAATCTTTTTCAACGGATCTAAACGTTGGCAGTTCTCAATCTGGTGATTTTTCACCAGAGAGCCAGAGTAGTTTGCCTTCCTTTGGCACAGATTTTGTTCGGAACTACAACTGCAACTCAATGAAACCCGGGCCTATAACGTTTCAGCTATTTGGTGCAGTCATTCANACAGAACAGCCTGTTGAAAGTGGTTCAC | |||||||||
gi|10706464|gb|BF006117.1|BF006117 EST434687 DSLC Medicago truncatula cDNA clone pDSLC-39L12, mRNA sequence TGCCTGGCTCCCTGAATGCCA EST sequence (targeted fragment marked with yellow): GTGAAGCGAGTAAGTCCATGGTTGGTTGAATTGGTATCAAACATGTCGATGATTCATCTCGCACCTTTCTCACCACCAAGGAAGAAACTCCGTTTTCCACAACATCCGGATTTCCCTCTCGATGTTGTCCAGTTTCAAATACCAACGTTTTCAGGCAACCCTTTTAACCCTTTGTGTTGTTTATCTTCTTCGGATAATTATAACGCTCCTGCCGCAGGCATTCAGGGAGCCAGGCATGCTCAAATTGGAATATCTTTATCGGATCTTCACCTTAACAACAACAAATTTCAGTTAGGTGTGTTTCCAAATAATCGCGAGACGATTTCTAATGTTAGCAACATAACTACCAACCATGATAATAAGAGCAAAGAAAGTATATCATGTCTGTTGACTATAGGAAATTCTCACAAGAGAAGTTTGGAGATCAAATCTGATAATAATGATAATAGACACCAATTTTTGCTTTTTGGTCAACCAATTCTCACTGAGCAACAAATCTCTAGAAAAGATTCTAGTGATGATGTGTTGTTGTCCAAGAAAAAGGACAAAGAGAAGTGGTTTTTCAGTGATACTACTCAATCTTCTATTTCTGAACAGTTTTCACCAGCAAAATCTTCTACTACTAGTGCTA | |||||||||
gi|148765690|gb|ES612384.1|ES612384 MTGland_A019_2007-05-07/MTGlandA019_F01_003_1 Medicago truncatula A17 glandular trichome Med TGCCTGGCTCCCTGAATGCCA EST sequence (targeted fragment marked with yellow): TCGTCTCGAATAAGTTGGTTTATGGGAATTGTATCTGGAGTTCAGTTTGTTGATCCCCTTCTCTGGCCTAATTCACCTTGGAGGCTTCTTCAGGTTAAATGGGATGAACCAGATTTACTGCAAAATGTGAGAAGGGTGAGTCCATGGTTGGTTGAATTAGTAGCAAACATTCCATCCATAAACCTTTCACCTTTCTCACAACCAAGGAAGAAATTGAGATTGTCGCCGCACCACGATTTCCCCCTCGACGGCCAAATTTCAGTGCCATCGATTCCTAGTAACCTTCTAGGTCAGAGCAACCTATTCCGTTGTCTACCCGAAAGTACTCCTGCTGGCATGCAGGGAGCCAGGCATGCTCATTATGGTCTTCCGATATCGGATCTCCACCTCAGTAAAGTTCAGGCAGGTCTATTTCCGGCCGGTTTTGTGCCTTTTGATCATGCTGCTAAACTACCTAGTGTCTCTAATAACCTAATGATGCAAAAATCTAGCATGAGTGAGAATGTCTTTTGCTTACTATCCATGGCAAGTTCTACTCAGTCTTCAAAGAAATTCGACGATGAGAAGAAACCTCAGCTTGTTCTTTTCGGCCGAAAAATTCTCACCGAGCAACAGATCTCTAATGACCGTTCATCAGATGGAAATACCAATAAAATGGGTAATTTTTCC | |||||||||
gi|20286000|gb|BQ148941.1|BQ148941 NF084G06FL1F1052 Developing flower Medicago truncatula cDNA clone NF084G06FL 5', mRNA sequenc TGCCTGGCTCCCTGAATGCCA EST sequence (targeted fragment marked with yellow): TTCGGCACGAGGGTGGGATGAACCAGATTTACTTCAAAATGTGAAATGTGTAAACCCTTGGTTAGTTGAATTAGTCTCAAACATGCCAAATTTCAATCTCTCACCATTCACACCTCCAAGAAAGAAACCAAGGTTTATCCAAGATCCATATTTTCACCTCATGAATCAATCATCATCACCATCAATCTCCAACATTAATCTTCTCAATTACACAAAATCTTCTCTCTGTAACATTCAAGACACTACCACTAATAGTTCTTTTGCATCAAGCATACAGGGAGCCAGGCATGCTCAATTTGGACCAAATTATAATAATCCATCTGATTTAATTCCCTTCAACAAGCTACTACAACAAGACATGTTTCTTGGTAATTTGTCATTGTCAAGGTTTAATCAACAACAACCTATAACTAGGCCTCCTTATGGACCCTACAAGAGTATCAATAACAATAACAACACTAAGACCAATGTTGACTTGTCTTGTTTGTTGAGTGTGGGAAATTCTGGTCAAAGTTTTAAGGAATCCAATATTGAAGCAAAAGCACCCCATAACCATAACCATATTTTGTTATTTGGAAAAATCATTCACACTGAACAAAACAGTTCAAATATTTCAAAGAGTGATTCTGTTTCTGAANGAACTTCTTTGAA | |||||||||