| mature miRNA: TTACCGATTCCACCCATTCCTA species: Medicago truncatula database: miRNEST The numbers on the right side of the alignments show a score calculated for them. When calculating the score, a mismatch is given a score of 1, bulge: 2, and wobble: 0.5. |
| Predicted miRNA targets | |||||||||
gi|11936378|gb|AW693660.2|AW693660 NF066G08ST1F1000 Developing stem Medicago truncatula cDNA clone NF066G08ST 5', mRNA sequence TTACCGATTCCACCCATTCCTA EST sequence (targeted fragment marked with yellow): AAGAATTCGGCACGAGGAAAACCTTTTTTTTTTTTGTTTATTTCTTGATTTCACATATGTTCAAATCCTTGATATCCTTCTATGTTAATATTAGATCATGTGTGATTCAAGACATTTAAGAACTGTTATTGACTTTGGCTCCTAAATGTGTGCAATGGCGCTCGAAGATCGGCCACAACTATGTGGAGCAACATCCTTGGGGATGGGTGGATTCGGTAAAACATTGAGGATCGTACGTACATTTCTACACATTTTGTTCTTATGTTTTCACTTGGTAACATCTATGCTGCTATGGAATTTCATAGGGATTGACGTCCAAAAACCTCCTTGTTGATAGAAACGTTAATGTAAAATTGCTCATTGAATTTAATCTTTATGATTAATTAATGTTCCACATGGTGGTTATACTATTTGAATTGTTCATGTGATGTGGTATGACTTTTTTTACTTATGGAATAAGAGACTTTGTTGGAACGGGTAAGCTATCATAATTTTTATTCTTATTAATCAATTACATTCTTTATATCCTTCATGTTATTACATATTAGACAACAATATATCTACAAATATTAATTATGACACTTAACATA | |||||||||
gi|157983461|gb|EX531733.1|EX531733 MTGland_B027_2007-05-25/MTGlandB027_E09_036_1 Medicago truncatula A17 glandular trichome Med TTACCGATTCCACCCATTCCTA EST sequence (targeted fragment marked with yellow): ACGGCCGGGGGTAGTAGTATTCATTCNTGGGTAGACCACAGAACTAGAAGTAATGTTGGAATGGGAGGAATTGGTAAAGCCACTTTGGCAACAAAGCTATGTTAGGATGATTGAACAAGTTATGGGTACGTATGTTAAAAATCCTCTTTGATTCTATTCTATCATGCATGATAAATATGCTAACTTGTTCTTCTTTTGATTCTCTACACACTTATTGTTCTCTTTTGACTCATTAGGTAAATTTAGGAAAAATATGCATTATGGTANAAGATATTGAATACTCTTGGCTTATTGTTCTCTTTTGATTCATTAGGTAAATTCAGGGAAAAATTTTTGTCTCCTTTTCATAAACGCAACAGTTGAANATTATTGTANAGAGACTATTTGAACATTGTGGATATCGAGTTCCTATATGTTTCCAAGTAATGAAGATGCAGTTAATAGATTTGGACTTTTTCTGAAGAAAATTGAGGGAAGTACAATATTGATGGCCATTTGCAAAGGAGGTTGAGGATTTGGCTTTGGCTTCTGATGTTGTGAGGAGGTTAGAGTTTGATTTTGGTGGNAGGTCTCGGTTGGGTGGTGACTTTATTGGTGTTTTTAATATCCGAGATGTATGAGTTTTTTTTTTTTGTTTTTTTTGTTCCGCCTATANNCNACATCCTTATTTGTTGTTTTCTTTGGGATCNNAGTGCGCANTGANGAATATGTGNAAGCTTAAATNANCTTTTTTGTGGANNCTGAACAANCCNAATTTACCNNCNNACCA | |||||||||
gi|14879467|gb|BI271199.1|BI271199 NF050F01FL1F1015 Developing flower Medicago truncatula cDNA clone NF050F01FL 5', mRNA sequenc TTACCGATTCCACCCATTCCTA EST sequence (targeted fragment marked with yellow): GACATTTAGGGACTTTTGTTTATTTGGCTCTCATATGCGTGCAATGACAGTCGAAGATCAGTCACAACTATGTGGATCGACATCCTTAGGCATGGGTGGATTCGGTAAAACATCGAGGAGGTACGCTTTTCTGGAGTTTCCGGAAACCATCTTTAATTTGTCTGTAATTTTCTTTTAGTTTATGTTGTTATCTTTGTTTCTAGGAACACACAAAGCACCATTTCTACATGTTGTTTTTTCATTTCAGGATCCATTACTTGCGACAGGGCGAATGCAAATATGTGAGGTTTTTTGTGTCATGTATGCATTTACTCTTTTTGCTTCGATTTTGGGGTTTGATCGTTTACC | |||||||||