| mature miRNA: TTGACAGAAGATAGAGGGCAC species: Medicago truncatula database: miRNEST The numbers on the right side of the alignments show a score calculated for them. When calculating the score, a mismatch is given a score of 1, bulge: 2, and wobble: 0.5. |
| Predicted miRNA targets | |||||||||
gi|209566340|gb|GE347410.1|GE347410 MEUB696TF JCVI-MT2 Medicago truncatula cDNA 5', mRNA sequence TTGACAGAAGATAGAGGGCAC EST sequence (targeted fragment marked with yellow): GTTGGCAAGAAATTCTCCCTAAATCTGGCGATGTTAACAAAGCAGCGCCTGGAACTCCTATCAGCCATCCTATCCGCGGTGCCGTTGGTTCATCCGCAGGTGAAAAAGGCGGTAGGAAGCTCTCTTCTGATGGCAAGCCCGGATCTTTTGACTCGGGTTGTGCTCTCTATCTTCTGTCAACACTTCAAACACAAAGCTCAGAGTTGAGTTTGATGCAGTCAAGCATCAACAGTCCAACACAATCTTCGTCTGGAACGTTGCATTTTGATGCTACAAAGGAGTACTCTTACTCCGGAAAGGTGAAGGATAAGCCGAATGGTCCGGTATTTGTTCTAGATGGAAACACAACAAACCTTCATTGCAATGGGATGCTGCAAATGGGTCCTAATGGATTGATCGAAAACGATAACTCAATGACTCTTCCATTCTTCTGGGAGTAACGTGCAGCTGAGTGGTGTCACGGCTTTTTGGTTGTTCTCGTCATTAGTTTATTGTTGCTCCTGACGCTCCCCCAGAGTTTCCAACACCAAGTTGTTTGGTCTTTGTTTGGAAATTTATGAAATTGTTGGTTTTCGAAACATTATGTGTACTCTTTTCCTTATGTATGAGTTGAACTCGATACCTTGGAAATTACAACATTCAAACACATTGCGCATCAACCATTCGCGCTAGACCCCTA | |||||||||
gi|27405572|gb|CA918642.1|CA918642 EST636360 MTUS Medicago truncatula cDNA clone MTUS-1B11, mRNA sequence TTGACAGAAGATAGAGGGCAC EST sequence (targeted fragment marked with yellow): CTAATTACGGAGATGCTGTTAACATCAAAGGGCGATTCTCTACATATGATAATACACTAAACCAATTTGAATTTAAGACAGAGAACACTAAAATACAATATTTGAACAGTGAGAAAAATGTGCGTTAAGTTCTCACTTTGGTACATATAAAAGGATTCAGACACTGGCTTGAGGCACAGGGGCATACCAGCCATGATGGATCTCTACTGCCTTCTTTCTTCTGGCAAGCCGAGACTTGCGATTTGCTCCTGTGTTTCTATGCAAAGTTCCCACTTTCACTGCTTTGTCAATTATAGAGTATGCCTCTCCAATCATCTTCTCAATTGAGGTGATTTCTTCTGCCTGTGCATCAGATTTCTTTTTAAGCAACTCCAGTGCTTCCAAAACCTTCTTAGTACGGGTTCTAATCTCGGATTTACGAGCTTTGTTGTAAACGCGACGCCTCTCAGCCTGAAGAGCTTTCTTAATGGCGGAATCAACCTTCTTTGGAGCAGCCTCGCAAACAACAACAACACCACGCCTCTGGACCGTATTCAAAGAGAACGTACCTTGTGAAAGGACTCTAGATTGGGAAATGTTTCGGGAGAAACTTAGTGAACCGGAATTTGATGATGAAGTTAGGGTAAGGTTCTTCATTTTCGAAGGAAGGTTCAACAATGAACATGAAACTGAAGCCATATCTCTCTCTCTTTCTCTTCTCCGGTTCCTCTCTCTC | |||||||||
gi|83668422|gb|DW018830.1|DW018830 EST1227791 MTY Medicago truncatula cDNA clone MTYBB44, mRNA sequence TTGACAGAAGATAGAGGGCAC EST sequence (targeted fragment marked with yellow): CGGCCGGGGCTCCTCCTCATATGAATAGTTTGAGTTTTCTCCACATTAATAACCTTGTTTTGTTTCTAGATCTCTCTGGTCTTTTTCCTCGAAACTATGGAGACAAGAAGGTCAGAGGGAAAAAGAAGTTTGAAGTACAAAGAGGATCATGAGGAAGAAGAAGAAGAGGAAGAGGATACGGATTTTGAAGAGGAAGAGGATGGTAGAAGGAAGAGGGTAGTGACAGATCTCTATAGCAAGAGAAGTTCCAAAAAAGCTGGAAGCTCAAACATTCCACCTTGTTGTCAAGTGGAGAATTGTGATGCTGATCTTAGTGAAGCTAAGCAATATCACCGGAGACATAAGGTTTGTGAGTATCATGCCAAAGCACCTGCCGTACACATTGCAGGGTTGCAGCAAAGGTTTTGTCAGCAATGTAGCAGATTCCATGGACTATCTGAATTTGATGACGCAAAAAGAAGTTGCAGAAGGCGTTTGGCCGGGCATAATGAGAGGCGTCGCAAAAGTGCAATTGACTATCAAGGAGAATGATTTCATGGTTGAAACAAAATCTCAGGTTCAAGCCCTTCGTATGTTGCTGGTCTCTAAGGATAGACCAATGCTCTCTATCTTCTGTCAATCTTTTATCTATGTATGCAATGATTTCTGTTTGCTGCTAGTTACATCTATCTATGTCATGTAATATTTAATTTTCTCACTTAGACTACTTATCATTAAAATCATGCATGAACACATGACATTTGAATTTTGC | |||||||||