| mature miRNA: TTCCTCAGCTTTCTTGAACTG species: Mesembryanthemum crystallinum database: miRNEST The numbers on the right side of the alignments show a score calculated for them. When calculating the score, a mismatch is given a score of 1, bulge: 2, and wobble: 0.5. |
| Predicted miRNA targets | |||||||||
gi|86172815|gb|DY033275.1|DY033275 mcr02-3ms1-a12 mcr02 Mesembryanthemum crystallinum cDNA clone mcr02-3ms1-a12 5', mRNA sequenc TTCCTCAGCTTTCTTGAACTG EST sequence (targeted fragment marked with yellow): CCGGTTGGGAACTAGTCTCGAGTTTTTTTTTTTTTTTTTTCGATGAAAATGGCTTTGCATTTTCAAGAAATTGAATGGCTTTACATAAGACTAAAAATCAAATTACATGAACTAAGATACACTTTCAGCAGAAGGCAGCTAATTAGAGCCAGGAAGCAAGTTTCTAGTTGTTTGAACAGTACCAAAACGTCCTCCACCACCTGGGATAATGCGGGATGGTGAAAGTATCTGCGCAAAAGACAGATTGTATGACTCTGTACCTAAGCGGCTCTGCAACCAACCTTTGCCTCCAGAGAACCCATCTGCCATGATCCAGCAGTTGTTGAATCCCATACTTGTCAAGGTCTTCGCAACTATTTTAGCTGAGTCAGAGTACGAGTCCATGATCACGATGTTGGAGCTCTTACTTAGGCGCTTCAGATAGGATATCTTCAAAGCCACTATCTCAGCTTCCACCTTCTTTGTGTTCCTAAGAAGGCCTCTTAACTTACTTGGTAATTCTTCTAACGGAATTGCAATCATTCGGCTTTTAGCACTTTGGGGAAGCTGAGGAATGCCAGCCTTGTTCTTGTCCTTCTCTGATCTAATATCAATCATAACGTAGTTCTGTGAGCACATCAGATCCAAGTTTGAGCAGGAGTAAGTCCACCTTTATATCCAC | |||||||||
gi|18024528|gb|BM302153.1|BM302153 MCA046A02_23490 Ice plant Lambda Uni-Zap XR expression library, 0 hours NaCl treatment prescr TTCCTCAGCTTTCTTGAACTG EST sequence (targeted fragment marked with yellow): GCTCTTTTGAGTGGCTCTCTTCCTCTTCATTAGAGTTGCATAAACAGCACAGGGAAAAAAGAATATTGAAGTCAAGATATCGATGAAAATGGCTTTGCATTTTCAAGAAATTGAATGGCTTTACATAAGACTAAAAATCAAATTACATGAACTAAGATACACTTTCAGCAGAAGGCAGCTAATTAGAGCCAGGAAGCAAGTTTCTAGTTGTTTGAACAGTACCAAAACGTCCTCCACCACCTGGGATAATGCGGGATGGTGAAAGTATCTGCGCAAAAGACAGATTGTATGACTCTGTACCTAAGCGGCTCTGCAACCAACCTTTGCCTCCAGAGAACCCATCTGCCATGATCCAGCAGTTGTTGAATCCCATACTTGTCAAGGTCTTCGCAACTATTTTAGCTGAGTCAGAGTACGAGTCCATGATCACGATGTTGGAGCTCTTACTTAGGCGCTTCAGATAGGATATCTTCAAAGCCACTATCTCAGCTTCCACCTTCTTTGTGTTCCTAAGAAGGCCTCTTAACTTACTTGGTAATTCTTCTAACGGAATTGCAATCATTCGGCTTTTAGCACTTTGGGGAAGCTGAGGAATGCCAGCCTTGTTCTTGNCCTTCTCTGATCTAATATCAATCAT | |||||||||