miRNEST 2.0: an integrative microRNA resource miRNEST 2.0, an integrative microRNA resource :: Browse




mature miRNA: ATTGAGTGCAGCGTTGATGA
species: Musa ABB Group
database: miRNEST
The numbers on the right side of the alignments show a score calculated for them.
When calculating the score, a mismatch is given a score of 1, bulge: 2, and wobble: 0.5.

Predicted miRNA targets
gi|197655609|gb|FL666615.1|FL666615 Embrapa_Musa_ABB_Stressed_Cachaco_F765TF Embrapa_Musa_Cachaco_ABB_Stressed Musa ABB Group cD

ATTGAGTGCAGCGTTGATGA
|||| ||||||||||| |||
TAACCCACGTCGCAACCACT

EST sequence (targeted fragment marked with yellow):
GGAGGACCTGGATCGAAGGCATCATTGAGTGCAGCGTTGATGAGAATCCAGTTTCCCTGATGATTAGGAACATGGGGGGTTTCACCAACGCTGCACCCAATAATGCCTTCGACGTCTTGGAAGAAAATCGAAGCAGACATGGATGATGCTGCTCATGCAACGAGGAGGAGGAAGTGACAGGCTCCTGCTTCCTACCTCTCTGGTTACTACGACTAGAGATCTTTGCTTCCCGTTCCTCTTGCTGCTCTTGTTAGTCATTTGCTCGTCAAGCAAATGCTTTTGTTCTTGTTGCTTCGAGGCCTCCTGTTTATGCTCCTCATTATTCCATCATCTACTGATATGGGTTATACTCGATTCCGATACGGCGACGATTCTCCAACTCCAGCAAGTAGATAAATACATTTGGCCGAGTTGTCCTACGCAAGTAGAGGGACACGAGCTACCTGCAGATATGGTCTTTGAATTGGTTTGCTTACACGAGCAGTCTTCCGGAGCAGATAAATAAAATTCGTAATCTTCGGCAGAGTCAACTCTGCCACTGTGTTATCTATCAGCTCTTCTTGTTCAGCTTCTGTTCGAATGGGAA