miRNEST 2.0: an integrative microRNA resource miRNEST 2.0, an integrative microRNA resource :: Browse




mature miRNA: CCTGCACCTGCACCTGCACCT
species: Nicotiana benthamiana
database: miRNEST
The numbers on the right side of the alignments show a score calculated for them.
When calculating the score, a mismatch is given a score of 1, bulge: 2, and wobble: 0.5.

Predicted miRNA targets
gi|39880057|gb|CK295551.1|CK295551 EST758265 Nicotiana benthamiana mixed tissue cDNA library, normalized, full-length Nicotiana

CCTGCACCTGCACCTGCACCT
||||||||||| | ||||||
GGACGTGGACGCCGCCGTGGA

EST sequence (targeted fragment marked with yellow):
AAATGAGAAACCATATATATCAAGGCACATTTTATAGTATTGAAGAATCAAAAGGAAAAACTTTGAAAAATGTACATAGAATATTGTACAAAGTACAAACTAACACGAGAAAGAGAGAAGGGAGAAAAACACAAACAAAAAATATAACAAATCATGTTTTTGTCTTCTTTCTTATACAGTGACCACAAAACACAGAAAAATCAACAGACAAAGAAAAATAAAATAAAAAATCAACTCTTACACAGAGAGACAAACAAATTGAAAGATTCATCAAGCTTTTGGTGGTTCTGGTGCTGCTACTGCTGCAGGTGCTTCTTCCACCTTGGCAGGTGCCACGTCAGCTGCAGGTGCTACCTCAGCAGGTGCCACCTCAGCTGCAGGTGCCGCCGCAGGTGCAGGTGCAGGTGCAGGTGCAGGTGCAGGTGCAGGTGCTGGTGCTGGTGCTGGTGCTGGTTCTTCCTCTTTCTTTGCTTCTGCTTCAACAACTATCTCTTTCTCCTTCACCTCAACAGGAGCAGTTGTTGTTGCTTCTGCTTCAGAGGCGGCGGCTACTGGGATCGCCGCCTCTTCTTCTTTCTTGTCTTCTGTGACGATTAAAGTGGAAACTTTCTCGAACACAAAAAGAACCGGACCAGATACATAGGAAGGACCAAAGTTTGAACTTGCTTCACTTACTACTTTTGATCCCGGAAATTCAATCTTGACAAGCTCATCAAGGAATTTCT



gi|39865163|gb|CK288044.1|CK288044 EST750766 Nicotiana benthamiana mixed tissue cDNA library, normalized, full-length Nicotiana

CCTGCACCTGCACCTGCACCT
||||||||.|| | |||| ||
GGACGTGGGCGAGCACGTTGA

EST sequence (targeted fragment marked with yellow):
CTTCACAATACTGTAGCACAATCACATGTAATATTCATGGCCGCCGAGTAACAGTACGTTCTTAAATAGCGTTTATTCTCAGCTCTGGGGAAGTTGGAGCAACATAAAGATGAACAAAAGCTCCTGAACTAATAGCTAGCTATCCGCTTATTAAATCTAACAAATTTAGCTAGGAAGTCAAAAAACTTTCTCCATTCGAGGTTTAATCAAAAGTTGAATGCAACAATGAAGGGCGGAATCATAATGCTGCTATGCACTCGATTTCAATCCTTGCATCCATTGGTAGTGCTGCCACCTGATAAGTTGCACGAGCGGGTGCAGGAAATTGAAAATATTTAGCATAAATCTCATTCACTGTCTTGAAGTCCTTCAAATCAGCTAATAGGATCGTCGTCTTAACAACTGCAGAGTAGCTAACGCCACTTGCTTTAAGTATCTCCCCCATATTTTTGAGAACCTGCTCTGTTTGATCCTCCACACTGTCTGAAACAAATTTGCCAGTCTCTGGAACAAGACC



gi|39880057|gb|CK295551.1|CK295551 EST758265 Nicotiana benthamiana mixed tissue cDNA library, normalized, full-length Nicotiana

CCTGCACCTGCACCTGCACCT
|| ||||||||||||||||||
GGTCGTGGACGTGGACGTGGA

EST sequence (targeted fragment marked with yellow):
AAATGAGAAACCATATATATCAAGGCACATTTTATAGTATTGAAGAATCAAAAGGAAAAACTTTGAAAAATGTACATAGAATATTGTACAAAGTACAAACTAACACGAGAAAGAGAGAAGGGAGAAAAACACAAACAAAAAATATAACAAATCATGTTTTTGTCTTCTTTCTTATACAGTGACCACAAAACACAGAAAAATCAACAGACAAAGAAAAATAAAATAAAAAATCAACTCTTACACAGAGAGACAAACAAATTGAAAGATTCATCAAGCTTTTGGTGGTTCTGGTGCTGCTACTGCTGCAGGTGCTTCTTCCACCTTGGCAGGTGCCACGTCAGCTGCAGGTGCTACCTCAGCAGGTGCCACCTCAGCTGCAGGTGCCGCCGCAGGTGCAGGTGCAGGTGCAGGTGCAGGTGCAGGTGCAGGTGCTGGTGCTGGTGCTGGTGCTGGTTCTTCCTCTTTCTTTGCTTCTGCTTCAACAACTATCTCTTTCTCCTTCACCTCAACAGGAGCAGTTGTTGTTGCTTCTGCTTCAGAGGCGGCGGCTACTGGGATCGCCGCCTCTTCTTCTTTCTTGTCTTCTGTGACGATTAAAGTGGAAACTTTCTCGAACACAAAAAGAACCGGACCAGATACATAGGAAGGACCAAAGTTTGAACTTGCTTCACTTACTACTTTTGATCCCGGAAATTCAATCTTGACAAGCTCATCAAGGAATTTCT



gi|47513360|gb|CN748363.1|CN748363 SAL_US028xc02r1.ab1 SAL_US N.Bentheme Nicotiana benthamiana cDNA 3', mRNA sequence

CCTGCACCTGCACCTGCACCT
|||| ||||||| | |||||.
GGACATGGACGTCGTCGTGGG

EST sequence (targeted fragment marked with yellow):
AAGATGAATGTAGAAAAGCTGCGTAAGATGGCCGGTTCGGTCAGAACCGGTGGAAAGGGTACCATGAGAAGAAAGAAGAAAGCCGTTCACAAAACAACTACAACCGATGACAAAAGACTACAGAGCACCTTGAAAAGAATAGGTGTCAATGCCATTCCTGCTATTGAAGAAGTCAACATTTTCAAGGAGGATGTTGTTATCCAATTCATTAATCCCAAAGTTCAAGCATCTATTGCTGCAAACACATGGGTTGTTAGTGGTTCCCCCCAGACAAAGAAATTGCAGGATATCCTTCCTCAAATTATTCACCAATTGGGTCCTGATAATTTGGAGAATTTGAAGAAGTTGGCTGAGCAGTTTCCAGAAGCAGGGTGCTGCTGCAGGTACAGGTGAGGCTGCAGCACAGGAAGACGATGATGATGAAGTACCAGATAATAATGGCTGGTGAAACTTTTGAAAGGTGCTGCTGAGGAGGGTCACATTCTTGAAGTTTTTGTTAAATTTTGTGGCATCCCTTACTTTCAATAGTTTTGATGTCAATTTTACTTTTAGTTTTGA



gi|39875381|gb|CK293203.1|CK293203 EST755917 Nicotiana benthamiana mixed tissue cDNA library, normalized, full-length Nicotiana

CCTGCACCTGCACCTGCACCT
||||||||||||||||| ||
GGACGTGGACGTGGACGACGA

EST sequence (targeted fragment marked with yellow):
GCACAAAATCCTTAATTTACTTAATCACTCGTCCCATGATATGTGTTAAGTAAGCCAGTATTTCATAAAATGTCAAAAAATAACCCATGTTAAATAAAATTCTCCTAATGAGTTCAACAAGGCTCATCCACTCCCTCATTGTCGTTCCATGTAATCATGCCATCACAACTGAAATACTGCAAAATCTCACAAAACCAAGCACCTTCCAAGTTTCTCTGCTTATTGTTTACTGGGTCTTACTCAAACAATTCTTAAGGTTTGATGACAAACAGAGGCATATCAACACTGACAGACTTGCCATCTTCAGCAAAAATATCAATGATGGTTCCTGATTGATCAGCCTCTATTTCATTCATCAATTTCATTGCTTCAATAATGCAAAGAACTTGACCCTTCTGCACTTTGTCACCAACCTTCACAATTGGTGGTTCACCAGGTCCTGGACTTCGATAGAATGTCCCTGCCATTGGACATTTGAGTGGCGGAACAGATGAGTCAGATGGCTTTGCTGCAGCTGGAGAAGGTGCAGGGATTTGAACTGGAGGAGCAGCAGGTGCAGGTGCAGGTGCAGGTGGAGGTGGGCTAAATTGTACAGATGGCACATGATATGATTGTAGAAATGGGGTGTGTGCAGGAGGCGGTGGTTGTGGTAATGCCTCCTTCTTACGGATTAAAATTTCACAATCAAGCTGTTTTAAATGCAGCTCCACAACATCCCTAGAA



gi|47507872|gb|CN742875.1|CN742875 SAL_US032xj23f1.ab1 SAL_US N.Bentheme Nicotiana benthamiana cDNA 5', mRNA sequence

CCTGCACCTGCACCTGCACCT
|||| ||||||| | |||||.
GGACATGGACGTCGTCGTGGG

EST sequence (targeted fragment marked with yellow):
GCACGAGGTGTCTTTCATTTTACAAGCCTTTGCTTGTCCCTTCCACTGCGGCTAGGGTTTTAGCTCACTCTTCAAGATGAATGTAGAAAAGCTGCGTAAGATGGCCGGTTCGGTCAGAACCGGTGGAAAGGGTACCATGAGAAGAAAGAAGAAGGCCGTTCACAAAACAACTACAACAGATGATAAAAGACTACAGAGCACCTTGAAAAGAATAGGTGTCAATGCCATACCTGCTATTGAAGAAGTCAACATTTTCAAGGAGGATGTTGTCATCCAATTCATTAACCCCAAAGTTCAAGCATCTATTGCTGCAAACACATGGGTCGTTAGTGGTTCTCCCCAGACAAAGAAATTGCAGGATATCCTTCCTCAAATTATTCACCAATTGGGTCCTGATAATTTGGAGAATTTGAAGAAGTTGGCTGAGCAGTTCCAGAAGCAGGGTGCTGCTGCAGGTACAGGTGAGGCTGCAGCTGTTGCCGCAGCACAAGAAGAAGATGATGATGAAGTACCAGATCTCGTGGCTGGTGAAACTTTTGAAGCTGCTGCCGAGGAGGGTCACACTTCTTGAAGTTNTTGTTAAATTNTGTGGCATCCCTTTCATATTNTGATGTCAGTTTTACCTT



gi|39853661|gb|CK282247.1|CK282247 EST744969 Nicotiana benthamiana mixed tissue cDNA library, normalized, full-length Nicotiana

CCTGCACCTGCACCTGCACCT
||||| ||||| ||||| |||
GGACGGGGACGGGGACGGGGA

EST sequence (targeted fragment marked with yellow):
GATCGTCAATTGACGTTAATCTACAGGGACAGGGGCAGGGGCAGGGGCAGGGGCAGGGGCCAACTAAAACTGCTTTACTTCATCGCTTGGTTCGTGATGGTGCGTGCAAAAGGCAAGGCCAATGCTTCAACTAAACGGTCAGTGTCCAAAGCAGATGCTGCAGTTGCTTCTGAAGCTGATACGACACTTGACTCCAGTGAGGTGGAAAACCACATAGAAACTGGAGGCTCGGTTGAGATTTCAGTGGAAACAGCAGTAAATTCCACTGTAGTAACTGAAGAAACAATGATCACTCTTGTAGAAGAAGAAGAAGAAAATGATGGAGCTGAAACTGAAACTTTAGAGGGAGAACATGCTATGGAAGAAGATGAAGATAATAAAGAAAATGAAGTTTCTGGAGGAGGAGATGAAAAATGTGTTTCTGATAAGGAAGAAGAAGATGCTATTAGTAATGATGAAGGTAATAACCAAGAAAATACCATAGAACAGGAAGATGGTGAACAGATCATAGATGATCAGCAAGTAGGAGATGCTGCTGGTGTAGACAAGGATAACCAGGAAGATGAAATGCCAAAACAAGAAGATGAAACAAATGCAAATGAAGAGAATAAAGAGAAAATAGAAGGTGAAAAGAATAAAGAGAAAATAGAAGGAAGTTTGAAGCAAAAAGCTAAAAAAATGAAGAGAAGAAATAATAGGAAGAGAAAGACAAATGGAAGCCCCCAAGAGAAAGGTGAAAATAAGCAAGTTATGAAGAAAGTAGCCTCTAACGGTAAGGTTGGGAAGGACTTGGGAAAATTGGAGTCAAATGACGGTGAGCAAAGCTCTAAAAAAGTTGCCTCCGGAGGTAAGCCTAGAGTGGTCGCTCAAGGCAAAGACGAGCCCGAGTCGTCACACAAGAAAGTTGTCCTCAAAGAAAGAAGGCTAG



gi|39877059|gb|CK294047.1|CK294047 EST756761 Nicotiana benthamiana mixed tissue cDNA library, normalized, full-length Nicotiana

CCTGCACCTGCACCTGCACCT
|||||||||||||||||||||
GGACGTGGACGTGGACGTGGA

EST sequence (targeted fragment marked with yellow):
ATATCAAGGCACATTTTATAGTATTGAAAAATCAAAAGGAAAAACTTTGAAAAATGTACATAGAATATTGTACAAAGTACAAACTAACACGAGAAAGAGAGAAGGGAGAAAAACACAAACAAAAAATATAACAAATCATGTTTTTGTCTTCTTTCTTATACAGTGACCACAAAACACAGAAAAATCAACAGACAAAGAAAAATAAAATAAAAAATCAACTCTTACACAGAGAGACAAACAAATTGAAAGATTCATCAAGCTTTTGGTGGTTCTGGGGCTGCTACTGCTGCAGGTGCTTCTTCCACCTTGGCAGGGGCCACGTCAGCTGCAGGTGCTACCTCAGCAGGGGCCACCTCAGCTGCAGGTGCCGCCCCAGGTGCAGGTGCAGGTGCAGGTGCAGGTGCAGGTGCAGGTGCTGGTGCTGGTGCTGGTGCTGGTTCTTCCTCTTTCTTTGCTTCTGCTTCAACAACTATCTCTTTCTCCTTCACCTCAACAGGAGCAGTTGTTGTTGCTTCTGCTTCAGAGG



gi|47509548|gb|CN744551.1|CN744551 SAL_US025xj17r1.ab1 SAL_US N.Bentheme Nicotiana benthamiana cDNA 3', mRNA sequence

CCTGCACCTGCACCTGCACCT
|||||||||||||||||||||
GGACGTGGACGTGGACGTGGA

EST sequence (targeted fragment marked with yellow):
AGCAAACGATCTTTGATTTGGTCCTTGTTGTTTCTCTCAAAGCTAGACTTGAAACCCAAAATCATATTGTTGTACAGATTAAACATAGTTTAGAGGAGCTTGTGTTCATTCTTACTCAGTGCGAGCACTCCTGTCCTAAAATAATGCTAGACAGAAAAGCATGGTGATGGACCTCGATTTTTTATTTTTTATTTTCTGTTAAGATTTGTCTTTTGTTTCTTCTAGCACTCGGAAATGATATGAAGATATCAATGTAGTGTTTAGCAGTTTCACGGGATCTTGTTTCGGATTGAAGTGAAACTGGCGAGAAAGGTGTTTCTTTAGGTAAAATTGGGTTCTTTCAAATGATTGGTTAATCAAATTCTATGCCAACGCTTTGTAGAGTATGCGTTTAAAACACTATTCAAGGATACCAGGTGCAGGTGCAGGTGCAGGTACAGGTACGCATACATTTTGTTGTATCTCTGTAATGTAAAGCTCCAAGCGGCCGTTTGGTTGTTGGTTAGAGTTATGCAGGTATTAGTAATGTAGGAATTAATTATGCAGGAATTAATTATGCGAAGATTAGTTATGTAAAGATTAGTAATATAGAAATGTAAGGTGAATATTATTTATTATTAAAAAAAAAAAAAAAAAAAAAAAAAAACTCGAGGGGGGGCGCCGGTACCC



gi|120550058|gb|EH368922.1|EH368922 D01_j001_plate_66 j001 Nicotiana benthamiana cDNA 5' similar to Hypothetical protein PF13_00

CCTGCACCTGCACCTGCACCT
||||||||||| ||||| |.
GGACGTGGACGAGGACGGAGG

EST sequence (targeted fragment marked with yellow):
GCGCGCCTACTCGACTAGTGCCTTCCTTTTTTTTTTTTTGCAAGGTGACACTAATATATATCCCAATGAATTAAACATGAAAAGCAAAAAAAGAAAAAAAAACAAATAGATGAAGCTCAACCTCCTCGTCTCAATGACCTAACGTAACGGACTCATATGAGAACACACCAAGAAACTAGACATCTTGGAACAGGGAGATTGAGTTGAAATTAAAATACTACTAATAAAAACATAAAACTCTACACCAATTACACCTACGAAATAAAATCAAATATTATTGGACTGACAAAGAGCTTCATGTATACTCCATTAGTCGATGTTCATGCAAGCTAGCTCAATCAGCAGAAAAGCCCAAATGCAAGAGCTACAAGAGAAGCAAAGACGGTCGGTACAAAAAAAGTAGCATTGGAGGCAGGAGCAGGTGCAGGCGCATCCACTGCAACTA



gi|39872574|gb|CK291782.1|CK291782 EST754496 Nicotiana benthamiana mixed tissue cDNA library, normalized, full-length Nicotiana

CCTGCACCTGCACCTGCACCT
||||||||||| | ||||||
GGACGTGGACGCCGCCGTGGA

EST sequence (targeted fragment marked with yellow):
GCACATTTTATAGTATTGAAGAATCAAAAGGAAAAACTTTGAAAAATGTACATAGAATATTGTACAAAGTACAAACTAACACGAGAAAGAGAGAAGGGAGAAAAACACAAACAAAAAATATAACAAATCATGTTTTTGTCTTCTTTCTTATACAGTGACCACAAAACACAGAAAAATCAACAGACAAAGAAAAATAAAATAAAAAATCAACTCTTACACAGAGAGACAAACAAATTGAAAGATTCATCAAGCTTTTGGTGGTTCTGGTGCTGCTACTGCTGCAGGTGCTTCTTCCACCTTGGCAGGTGCCACGTCAGCTGCAGGTGCTACCTTAGCAGGTGCCACCTCAGCTGCAGGTGCCGCCGCAGGTGCAGGTGCAGGTGCAGGTGCAGGTGCAGGTGCAGGTGCTGGTGCTGGTGCTGGTGCTGGTTCTTCCTCTTTCTTTGCTTCTGCTTCAACAACTATCTCTTTTTCCTTCACCTCAACAGGAGCAGTTGTTGTTGCTTCTGCTTCAGAGGCGGCGGCTACTGGGATCGCCGCCTCTTCTTCTTTCTTGTCTTCTGTGACGATTAAAGTGGAAACTTTCTCGAACACAAAAAGAACCGGACCAGATACATAGGAAGGACCAAAGTTTGAACTTGCTTCACTTACTACTTTTGATCCCGGAAATTCAATCTTGACAAGCTCATCAAGGAATTTCTGGACTTCAGTTGAGTGTTTCTTCAATCCTGAAACCTTTGGTCCCTTCACCAAAGTCTTGATCTCAACTGCAGCAGCTTCATAAATTTCAACAACTTTAGGTTGGAGCTCAGTTTTCTTCTCGTCGAACTCTTTGCTGTATTGCTCCTTAGCCTCGTCAAAGGTTTTCCATGCCTCAGCAGCAGCAGCCTTCTTCGGTCCATTTTTGTCAAGATCTGCTTTAATTT



gi|39880057|gb|CK295551.1|CK295551 EST758265 Nicotiana benthamiana mixed tissue cDNA library, normalized, full-length Nicotiana

CCTGCACCTGCACCTGCACCT
||||||||||||||||| |
GGACGTGGACGTGGACGCCGC

EST sequence (targeted fragment marked with yellow):
AAATGAGAAACCATATATATCAAGGCACATTTTATAGTATTGAAGAATCAAAAGGAAAAACTTTGAAAAATGTACATAGAATATTGTACAAAGTACAAACTAACACGAGAAAGAGAGAAGGGAGAAAAACACAAACAAAAAATATAACAAATCATGTTTTTGTCTTCTTTCTTATACAGTGACCACAAAACACAGAAAAATCAACAGACAAAGAAAAATAAAATAAAAAATCAACTCTTACACAGAGAGACAAACAAATTGAAAGATTCATCAAGCTTTTGGTGGTTCTGGTGCTGCTACTGCTGCAGGTGCTTCTTCCACCTTGGCAGGTGCCACGTCAGCTGCAGGTGCTACCTCAGCAGGTGCCACCTCAGCTGCAGGTGCCGCCGCAGGTGCAGGTGCAGGTGCAGGTGCAGGTGCAGGTGCAGGTGCTGGTGCTGGTGCTGGTGCTGGTTCTTCCTCTTTCTTTGCTTCTGCTTCAACAACTATCTCTTTCTCCTTCACCTCAACAGGAGCAGTTGTTGTTGCTTCTGCTTCAGAGGCGGCGGCTACTGGGATCGCCGCCTCTTCTTCTTTCTTGTCTTCTGTGACGATTAAAGTGGAAACTTTCTCGAACACAAAAAGAACCGGACCAGATACATAGGAAGGACCAAAGTTTGAACTTGCTTCACTTACTACTTTTGATCCCGGAAATTCAATCTTGACAAGCTCATCAAGGAATTTCT



gi|39880057|gb|CK295551.1|CK295551 EST758265 Nicotiana benthamiana mixed tissue cDNA library, normalized, full-length Nicotiana

CCTGCACCTGCACCTGCACCT
|||||||||||||||||||||
GGACGTGGACGTGGACGTGGA

EST sequence (targeted fragment marked with yellow):
AAATGAGAAACCATATATATCAAGGCACATTTTATAGTATTGAAGAATCAAAAGGAAAAACTTTGAAAAATGTACATAGAATATTGTACAAAGTACAAACTAACACGAGAAAGAGAGAAGGGAGAAAAACACAAACAAAAAATATAACAAATCATGTTTTTGTCTTCTTTCTTATACAGTGACCACAAAACACAGAAAAATCAACAGACAAAGAAAAATAAAATAAAAAATCAACTCTTACACAGAGAGACAAACAAATTGAAAGATTCATCAAGCTTTTGGTGGTTCTGGTGCTGCTACTGCTGCAGGTGCTTCTTCCACCTTGGCAGGTGCCACGTCAGCTGCAGGTGCTACCTCAGCAGGTGCCACCTCAGCTGCAGGTGCCGCCGCAGGTGCAGGTGCAGGTGCAGGTGCAGGTGCAGGTGCAGGTGCTGGTGCTGGTGCTGGTGCTGGTTCTTCCTCTTTCTTTGCTTCTGCTTCAACAACTATCTCTTTCTCCTTCACCTCAACAGGAGCAGTTGTTGTTGCTTCTGCTTCAGAGGCGGCGGCTACTGGGATCGCCGCCTCTTCTTCTTTCTTGTCTTCTGTGACGATTAAAGTGGAAACTTTCTCGAACACAAAAAGAACCGGACCAGATACATAGGAAGGACCAAAGTTTGAACTTGCTTCACTTACTACTTTTGATCCCGGAAATTCAATCTTGACAAGCTCATCAAGGAATTTCT



gi|39879501|gb|CK295275.1|CK295275 EST757989 Nicotiana benthamiana mixed tissue cDNA library, normalized, full-length Nicotiana

CCTGCACCTGCACCTGCACCT
||||||||||||||.|||||.
GGACGTGGACGTGGGCGTGGG

EST sequence (targeted fragment marked with yellow):
TCACAGAACAGAGCAAAATAGAACTCATTATTCAACCACCAAAAGTTAAATATCTAACAGGCCTTCACAATTATCTAACTAGAACAATTAGCTATCTTCCTCAGCAATCTGGTGATATCATCAACTAGAAATATTTAAAAAATATAGATAACAAGGAACCACCATCTTTGGCCATCATCTAAGTGTTCATGGATCTCAGTTCCTCCAACTGTGCTTTTATTTGATCTTGAACAAGCTCTAATCTCCTCAAATAAACTTCCAATTCTAGCATCTGTTGCTTCCTCCATTTGTCATCCGCCAGCATATCAGGGTTCATTGCACCGCTGCTGCCAAATCCTAAAGGGATTGGACTCAATGCCATTCCGAATCCAAAACTTCTCGATCCACTCAAGTTAGTCACATTGTTTAACAACTCCTTGAAAATGGGTGATAGGCAGCTCCTCACTGTTTCTTCGATCAAACTAGGTATTGAAGCAGCTGCTGATGCTGATGCTGCAGCTGTGGTCGTGGGAGGGGCCGTGGCCTGAGGGGCTGTCATCGGAAAGGGAGTGAACCCTGGTGCAGGCACGGGTGCGGGTGCAGGTGCAGGAGAGGACATATTTGTCCCTCCACCAGATGGAGATGGCAGATAGTAGTGTTGAATAAAGCCGTGTTTTTCTTCAACTTTAACTGCTCCTCCTCGAGACCTTTTCCTCGGCCTAGGAGTTTTAATGTCAATTCCGTTATGGCTGTGGTCA



gi|39863904|gb|CK287402.1|CK287402 EST750124 Nicotiana benthamiana mixed tissue cDNA library, normalized, full-length Nicotiana

CCTGCACCTGCACCTGCACCT
||||||||||||||||| |
GGACGTGGACGTGGACGCCGC

EST sequence (targeted fragment marked with yellow):
ATCAAGGCACATTTTATAGTATTGAAGAATCAAAAGGAAAAACTTTGAAAAATGTACATAGAATATTGTACAAAGTACAAACTAACACGAGAAAGAGAGAAGGGAGAAAAACACAAACAAAAAATATAACAAATCATGTTTTTGTCTTCTTTCTTATACAGTGACCACAAAACACAGAAAAATCAACAGACAAAGAAAAATAAAATAAAAAATCAACTCTTACACAGAGAGACAAACAAATTGAAAGATTCATCAAGCTTTTGGTGGTTCTGGTGCTGCTACTGCTGCAGGTGCTTCTTCCACCTTGGCAGGTGCCACGTCAGCTGCAGGTGCTACCTCAGCAGGTGCCACCTCAGCTGCAGGTGCCGCCGCAGGTGCAGGTGCAGGTGCAGGTGCAGGTGCAGGTGCAGGTGGTGGTGCTGGTGCTGGTGCTGGTTCTTCCTCTTTCTTTGCTTCTGCTTCAACAACTATCTCTTTCTCCTTCACCTCAACAGGAGCAGTTGTTGTTGCTTCTGCTTCAGAGGCGGCGGCTACTGGGATCGCCGCCTCTTCTTCTTTCTTGTCTTCTGTGACGATTAAAGTGGAAACTTTCTCGAACACAAAAAGAACCGGACCAGATACATAGGAAGGACCAAAGTTTGAACTTGCTTCACTTACTACTTTTGATCCCGGAAATTCTTCATAGAAGAACGAGAAAAAATCAATGTATCATTAGTTCCACGATGTAATCAAAGAGTGTAATTCCATATATACCATGAAAATTATTGAAGTGTTTTAACTTTTATTTATCGACAGCAC



gi|39877059|gb|CK294047.1|CK294047 EST756761 Nicotiana benthamiana mixed tissue cDNA library, normalized, full-length Nicotiana

CCTGCACCTGCACCTGCACCT
|| ||||||||||||||||||
GGTCGTGGACGTGGACGTGGA

EST sequence (targeted fragment marked with yellow):
ATATCAAGGCACATTTTATAGTATTGAAAAATCAAAAGGAAAAACTTTGAAAAATGTACATAGAATATTGTACAAAGTACAAACTAACACGAGAAAGAGAGAAGGGAGAAAAACACAAACAAAAAATATAACAAATCATGTTTTTGTCTTCTTTCTTATACAGTGACCACAAAACACAGAAAAATCAACAGACAAAGAAAAATAAAATAAAAAATCAACTCTTACACAGAGAGACAAACAAATTGAAAGATTCATCAAGCTTTTGGTGGTTCTGGGGCTGCTACTGCTGCAGGTGCTTCTTCCACCTTGGCAGGGGCCACGTCAGCTGCAGGTGCTACCTCAGCAGGGGCCACCTCAGCTGCAGGTGCCGCCCCAGGTGCAGGTGCAGGTGCAGGTGCAGGTGCAGGTGCAGGTGCTGGTGCTGGTGCTGGTGCTGGTTCTTCCTCTTTCTTTGCTTCTGCTTCAACAACTATCTCTTTCTCCTTCACCTCAACAGGAGCAGTTGTTGTTGCTTCTGCTTCAGAGG



gi|227568939|gb|GO604686.1|GO604686 NBERO1CH_T3_051_F02_02AUG2006_006 NBERO1CH Nicotiana benthamiana cDNA, mRNA sequence

CCTGCACCTGCACCTGCACCT
|||||||| ||||||| |||
GGACGTGGCCGTGGACTTGGT

EST sequence (targeted fragment marked with yellow):
GGCTAAGGTGAAGGCTTTGTCCTTTCTTGTTTTGCTTGTTTTTTCAAGTTTTATTTTAATGTCTGAAAGTCGAGTGGCGCGGATGGATTTAGGTTTGGATTTGGGTGGCGTTGGTCTTGGTGTTGGGATTGGCTTAGGGTTAGGTGGTGGAAGTGGTTCAGGTGCCGGTGCAGGAGCTGGTTCAGGTTCAGGATCAAGTTCAAGTTCAAGCTCGAGCTCAAGTTCTAGTTCATCTTCGTCTGGTGGTAGTGGTGGTGGTTCGGAGGCAGGCTCATCAGCCGGGTCATACGCTGGATCAAGAGCCGGTTCAGGATCTGGAAACAGAGGTGGATCGGGTGGTCGTGGTTATGGAGGTGGCTATGGAGGAGGGTATGGTGGAGGAGATGGTGGTAACTAAATCCATGCATGTCAATTTTCACACGTAAAATTAATTTAGCATTTCAAATTAAAGTTAATAATAAACAATGTGATGAAGTCTTTATGTATGTAGCTTGTAATATGTACCTTGTACGACTAGTTTGATCATTTTCGTTTGTGTTTAGGTTAAATGTAAGGACATGTTTGGTTTGTGTTTTATGGATTCTTCAGTTATGTTTAAAG



gi|39875381|gb|CK293203.1|CK293203 EST755917 Nicotiana benthamiana mixed tissue cDNA library, normalized, full-length Nicotiana

CCTGCACCTGCACCTGCACCT
|||||||||||||||||||||
GGACGTGGACGTGGACGTGGA

EST sequence (targeted fragment marked with yellow):
GCACAAAATCCTTAATTTACTTAATCACTCGTCCCATGATATGTGTTAAGTAAGCCAGTATTTCATAAAATGTCAAAAAATAACCCATGTTAAATAAAATTCTCCTAATGAGTTCAACAAGGCTCATCCACTCCCTCATTGTCGTTCCATGTAATCATGCCATCACAACTGAAATACTGCAAAATCTCACAAAACCAAGCACCTTCCAAGTTTCTCTGCTTATTGTTTACTGGGTCTTACTCAAACAATTCTTAAGGTTTGATGACAAACAGAGGCATATCAACACTGACAGACTTGCCATCTTCAGCAAAAATATCAATGATGGTTCCTGATTGATCAGCCTCTATTTCATTCATCAATTTCATTGCTTCAATAATGCAAAGAACTTGACCCTTCTGCACTTTGTCACCAACCTTCACAATTGGTGGTTCACCAGGTCCTGGACTTCGATAGAATGTCCCTGCCATTGGACATTTGAGTGGCGGAACAGATGAGTCAGATGGCTTTGCTGCAGCTGGAGAAGGTGCAGGGATTTGAACTGGAGGAGCAGCAGGTGCAGGTGCAGGTGCAGGTGGAGGTGGGCTAAATTGTACAGATGGCACATGATATGATTGTAGAAATGGGGTGTGTGCAGGAGGCGGTGGTTGTGGTAATGCCTCCTTCTTACGGATTAAAATTTCACAATCAAGCTGTTTTAAATGCAGCTCCACAACATCCCTAGAA



gi|39875381|gb|CK293203.1|CK293203 EST755917 Nicotiana benthamiana mixed tissue cDNA library, normalized, full-length Nicotiana

CCTGCACCTGCACCTGCACCT
||| |||||||||||||||||
GGAGGTGGACGTGGACGTGGA

EST sequence (targeted fragment marked with yellow):
GCACAAAATCCTTAATTTACTTAATCACTCGTCCCATGATATGTGTTAAGTAAGCCAGTATTTCATAAAATGTCAAAAAATAACCCATGTTAAATAAAATTCTCCTAATGAGTTCAACAAGGCTCATCCACTCCCTCATTGTCGTTCCATGTAATCATGCCATCACAACTGAAATACTGCAAAATCTCACAAAACCAAGCACCTTCCAAGTTTCTCTGCTTATTGTTTACTGGGTCTTACTCAAACAATTCTTAAGGTTTGATGACAAACAGAGGCATATCAACACTGACAGACTTGCCATCTTCAGCAAAAATATCAATGATGGTTCCTGATTGATCAGCCTCTATTTCATTCATCAATTTCATTGCTTCAATAATGCAAAGAACTTGACCCTTCTGCACTTTGTCACCAACCTTCACAATTGGTGGTTCACCAGGTCCTGGACTTCGATAGAATGTCCCTGCCATTGGACATTTGAGTGGCGGAACAGATGAGTCAGATGGCTTTGCTGCAGCTGGAGAAGGTGCAGGGATTTGAACTGGAGGAGCAGCAGGTGCAGGTGCAGGTGCAGGTGGAGGTGGGCTAAATTGTACAGATGGCACATGATATGATTGTAGAAATGGGGTGTGTGCAGGAGGCGGTGGTTGTGGTAATGCCTCCTTCTTACGGATTAAAATTTCACAATCAAGCTGTTTTAAATGCAGCTCCACAACATCCCTAGAA



gi|150428251|gb|ES886844.1|ES886844 NBT041_2005-09-16_1/NBT041_F11_1 Nicotiana benthamiana trichomes Nicotiana benthamiana cDNA,

CCTGCACCTGCACCTGCACCT
|||| ||||||| | |||||.
GGACATGGACGTCGTCGTGGG

EST sequence (targeted fragment marked with yellow):
GGGATAGTAAGGATTGACAAAAGACTACAGAGCACCTTGAAAAGAATAGGTGTCAATGCCATTCCTGCTATTGAAGAAGTCAACATTTTCAAGGAGGATGTTGTTATCCAATTCATTAATCCCAAAGTTCAAGCATCTATTGCTGCAAACACATGGGTTGTTAGTGGTTCCCCCCAGACAAAGAAATTGCAGGATATCCTTCCTCAAATTATTCACCGATTGGGTCCTGATAATTTGGAGAATTTGAAGAAGTTGGCTGAGCAGTTCCAGAAGCAGGGTGCTGCTGCAGGTACAGGTGAGGCTGCAGCACAGGAAGACGATGATGATGAAGTACCAGATCTCGTGGCTGGTGAAACTTTTGAAGGTGCTGCTGAGGAGGGTCACACTTCTTGAAGTTTTTGTTAAATTTTGTGGCATCCCTTACTTTCAATGTTTTGATGTCAATTTTACATTTTAGCTTTTGAGTGATCTATTTGATGTCTATTTGTGACACATCTCAAAAGAATTCCTT



gi|39879501|gb|CK295275.1|CK295275 EST757989 Nicotiana benthamiana mixed tissue cDNA library, normalized, full-length Nicotiana

CCTGCACCTGCACCTGCACCT
||||||||.|||||.| |||
GGACGTGGGCGTGGGCACGGA

EST sequence (targeted fragment marked with yellow):
TCACAGAACAGAGCAAAATAGAACTCATTATTCAACCACCAAAAGTTAAATATCTAACAGGCCTTCACAATTATCTAACTAGAACAATTAGCTATCTTCCTCAGCAATCTGGTGATATCATCAACTAGAAATATTTAAAAAATATAGATAACAAGGAACCACCATCTTTGGCCATCATCTAAGTGTTCATGGATCTCAGTTCCTCCAACTGTGCTTTTATTTGATCTTGAACAAGCTCTAATCTCCTCAAATAAACTTCCAATTCTAGCATCTGTTGCTTCCTCCATTTGTCATCCGCCAGCATATCAGGGTTCATTGCACCGCTGCTGCCAAATCCTAAAGGGATTGGACTCAATGCCATTCCGAATCCAAAACTTCTCGATCCACTCAAGTTAGTCACATTGTTTAACAACTCCTTGAAAATGGGTGATAGGCAGCTCCTCACTGTTTCTTCGATCAAACTAGGTATTGAAGCAGCTGCTGATGCTGATGCTGCAGCTGTGGTCGTGGGAGGGGCCGTGGCCTGAGGGGCTGTCATCGGAAAGGGAGTGAACCCTGGTGCAGGCACGGGTGCGGGTGCAGGTGCAGGAGAGGACATATTTGTCCCTCCACCAGATGGAGATGGCAGATAGTAGTGTTGAATAAAGCCGTGTTTTTCTTCAACTTTAACTGCTCCTCCTCGAGACCTTTTCCTCGGCCTAGGAGTTTTAATGTCAATTCCGTTATGGCTGTGGTCA



gi|39860038|gb|CK285458.1|CK285458 EST748180 Nicotiana benthamiana mixed tissue cDNA library, normalized, full-length Nicotiana

CCTGCACCTGCACCTGCACCT
||||||||||||||| |||||
GGACGTGGACGTGGAGGTGGA

EST sequence (targeted fragment marked with yellow):
GATTGCTTAATCAATGATCGAATAAAGCCAACAAGGTTAAGTTTAATACAACTATCTATGAGGCAAGCAAGTACATAAAAGAAACCAGTGCAGAATAGGAAGGCCCATTCCACTACAACCATCTTCCTGTCACAGGAAATCTGGAAAATATATCAAAATGAAATAACAAAGAGTTAATCCAGAGACATGCGAATGTAGTAGTCATACTATCAAGTCACATACCCTGAGGACCTTCACATTTTGAAGATGCATCAACTTCTGGAGAGAAACAGCAGAGGCAAGCATCAGGCTGCTGTCTGAATATTCATAGTTAAATTAGTAGAAAAAACTAAAAGCGAAGATCAGTTAGCAGAGAACCAAAATTGAAAAGCAGTGAACATGTAAGTCGAGAAAAACATAACGGACACAAAAATGTCAGTCAGTCACCAAAAAATTCCAACAATAATTAAGAGGTTCGAAAATGATATGCTAGGCCAGCTACGACAAAAGGCCTCTGCTCCAACACTTGAACCAAATTCATCTCTCTGCAAATGTCATAATAGTACAGCAAGGTTAAAGATGTGAGTCCGAAACTTCCAAAGAGTAAGACATGGCAAGAGGTAAGAAATCAGGTGATGTGCTCCAACAAATCAGCCTTGTACTGCAAGCCAATACAAAGTTAACTGCAATCATCATTTCATCTCAGCCATGAACTTTTCATATTCTGCATCTGTGCCGTAGGGAGGTTTCTCTGAAGATGATGGTGGAGGCGGAGGTGGAGGTGCAGGTGCAGGTGG



gi|47509548|gb|CN744551.1|CN744551 SAL_US025xj17r1.ab1 SAL_US N.Bentheme Nicotiana benthamiana cDNA 3', mRNA sequence

CCTGCACCTGCACCTGCACCT
|||| ||||||||||||||||
GGACATGGACGTGGACGTGGA

EST sequence (targeted fragment marked with yellow):
AGCAAACGATCTTTGATTTGGTCCTTGTTGTTTCTCTCAAAGCTAGACTTGAAACCCAAAATCATATTGTTGTACAGATTAAACATAGTTTAGAGGAGCTTGTGTTCATTCTTACTCAGTGCGAGCACTCCTGTCCTAAAATAATGCTAGACAGAAAAGCATGGTGATGGACCTCGATTTTTTATTTTTTATTTTCTGTTAAGATTTGTCTTTTGTTTCTTCTAGCACTCGGAAATGATATGAAGATATCAATGTAGTGTTTAGCAGTTTCACGGGATCTTGTTTCGGATTGAAGTGAAACTGGCGAGAAAGGTGTTTCTTTAGGTAAAATTGGGTTCTTTCAAATGATTGGTTAATCAAATTCTATGCCAACGCTTTGTAGAGTATGCGTTTAAAACACTATTCAAGGATACCAGGTGCAGGTGCAGGTGCAGGTACAGGTACGCATACATTTTGTTGTATCTCTGTAATGTAAAGCTCCAAGCGGCCGTTTGGTTGTTGGTTAGAGTTATGCAGGTATTAGTAATGTAGGAATTAATTATGCAGGAATTAATTATGCGAAGATTAGTTATGTAAAGATTAGTAATATAGAAATGTAAGGTGAATATTATTTATTATTAAAAAAAAAAAAAAAAAAAAAAAAAAACTCGAGGGGGGGCGCCGGTACCC



gi|39863904|gb|CK287402.1|CK287402 EST750124 Nicotiana benthamiana mixed tissue cDNA library, normalized, full-length Nicotiana

CCTGCACCTGCACCTGCACCT
|||||||||||||||||||||
GGACGTGGACGTGGACGTGGA

EST sequence (targeted fragment marked with yellow):
ATCAAGGCACATTTTATAGTATTGAAGAATCAAAAGGAAAAACTTTGAAAAATGTACATAGAATATTGTACAAAGTACAAACTAACACGAGAAAGAGAGAAGGGAGAAAAACACAAACAAAAAATATAACAAATCATGTTTTTGTCTTCTTTCTTATACAGTGACCACAAAACACAGAAAAATCAACAGACAAAGAAAAATAAAATAAAAAATCAACTCTTACACAGAGAGACAAACAAATTGAAAGATTCATCAAGCTTTTGGTGGTTCTGGTGCTGCTACTGCTGCAGGTGCTTCTTCCACCTTGGCAGGTGCCACGTCAGCTGCAGGTGCTACCTCAGCAGGTGCCACCTCAGCTGCAGGTGCCGCCGCAGGTGCAGGTGCAGGTGCAGGTGCAGGTGCAGGTGCAGGTGGTGGTGCTGGTGCTGGTGCTGGTTCTTCCTCTTTCTTTGCTTCTGCTTCAACAACTATCTCTTTCTCCTTCACCTCAACAGGAGCAGTTGTTGTTGCTTCTGCTTCAGAGGCGGCGGCTACTGGGATCGCCGCCTCTTCTTCTTTCTTGTCTTCTGTGACGATTAAAGTGGAAACTTTCTCGAACACAAAAAGAACCGGACCAGATACATAGGAAGGACCAAAGTTTGAACTTGCTTCACTTACTACTTTTGATCCCGGAAATTCTTCATAGAAGAACGAGAAAAAATCAATGTATCATTAGTTCCACGATGTAATCAAAGAGTGTAATTCCATATATACCATGAAAATTATTGAAGTGTTTTAACTTTTATTTATCGACAGCAC



gi|39872574|gb|CK291782.1|CK291782 EST754496 Nicotiana benthamiana mixed tissue cDNA library, normalized, full-length Nicotiana

CCTGCACCTGCACCTGCACCT
||||||||||||||||| |
GGACGTGGACGTGGACGCCGC

EST sequence (targeted fragment marked with yellow):
GCACATTTTATAGTATTGAAGAATCAAAAGGAAAAACTTTGAAAAATGTACATAGAATATTGTACAAAGTACAAACTAACACGAGAAAGAGAGAAGGGAGAAAAACACAAACAAAAAATATAACAAATCATGTTTTTGTCTTCTTTCTTATACAGTGACCACAAAACACAGAAAAATCAACAGACAAAGAAAAATAAAATAAAAAATCAACTCTTACACAGAGAGACAAACAAATTGAAAGATTCATCAAGCTTTTGGTGGTTCTGGTGCTGCTACTGCTGCAGGTGCTTCTTCCACCTTGGCAGGTGCCACGTCAGCTGCAGGTGCTACCTTAGCAGGTGCCACCTCAGCTGCAGGTGCCGCCGCAGGTGCAGGTGCAGGTGCAGGTGCAGGTGCAGGTGCAGGTGCTGGTGCTGGTGCTGGTGCTGGTTCTTCCTCTTTCTTTGCTTCTGCTTCAACAACTATCTCTTTTTCCTTCACCTCAACAGGAGCAGTTGTTGTTGCTTCTGCTTCAGAGGCGGCGGCTACTGGGATCGCCGCCTCTTCTTCTTTCTTGTCTTCTGTGACGATTAAAGTGGAAACTTTCTCGAACACAAAAAGAACCGGACCAGATACATAGGAAGGACCAAAGTTTGAACTTGCTTCACTTACTACTTTTGATCCCGGAAATTCAATCTTGACAAGCTCATCAAGGAATTTCTGGACTTCAGTTGAGTGTTTCTTCAATCCTGAAACCTTTGGTCCCTTCACCAAAGTCTTGATCTCAACTGCAGCAGCTTCATAAATTTCAACAACTTTAGGTTGGAGCTCAGTTTTCTTCTCGTCGAACTCTTTGCTGTATTGCTCCTTAGCCTCGTCAAAGGTTTTCCATGCCTCAGCAGCAGCAGCCTTCTTCGGTCCATTTTTGTCAAGATCTGCTTTAATTT



gi|39857458|gb|CK284163.1|CK284163 EST746885 Nicotiana benthamiana mixed tissue cDNA library, normalized, full-length Nicotiana

CCTGCACCTGCACCTGCACCT
||||| ||||| ||||| |||
GGACGGGGACGGGGACGGGGA

EST sequence (targeted fragment marked with yellow):
CGGATATTTGTTTCTCCGTCAATTGACGTTAATCTACAGGGACAGGGGCAGGGGCAGGGGCAGGGGCAGGGGCCAACTAAAACTGCTTTACTTCATCGCTTGGTTCGTGATGGTGCGTGCAAAAGGCAAGGCCAATGCTTCAACTAAACGGTCAGTGTCCAAAGCAGATGCTGCAGTTGCTTCTGAAGCTGATACGACACTTGACTCCAGTGAGGTGGAAAACCACATAGAAACTGGAGGCTCGGTTGAGATTTCAGTGGAAACAGCAGTAAATTCCACTGTAGTAACTGAAGAAACAATGATCACTCTTGTAGAAGAAGAAGAAGAAAATGATGGAGCTGAAACTGAAACTTTAGAGGGAGAACATGCTATGGAAGAAGATGAAGATAATAAAGAAAATGAAGTTTCTGGAGGAGGAGATGAAAAATGTGTTTCTGATAAGGAAGAAGAAGATGCTATTAGTAATGATGAAGGTAATAACCAAGAAAATACCATAGAACAGGAAGATGGTGAACAGATCATAGATGATCAGCAAGTAGGAGATGCTGCTGGTGTAGACAAGGATAACCAGGAAGATGAAATGCCAAAACAAGAAGATGAAACAAATGCAAATGAAGAGAATAAAGAGAAAATAGAAGGTGAAAAGAATAAAGAGAAAATAGAAGGAAGTTTGAAGCAAAAAGCTAAAAAAATGAAGAGAAGAAATAATAGGAAGAGAAAGACAAATGGAAGCCCCCAAGAGAAAGGTGAAAATAAGCAAGTTATGAAGAAAGTAGCCTCTAACGGTAAGGTTG