miRNEST 2.0: an integrative microRNA resource miRNEST 2.0, an integrative microRNA resource :: Browse




mature miRNA: TGTGTTCTCAGGTCGCCCCT
species: Nicotiana benthamiana
database: miRNEST
The numbers on the right side of the alignments show a score calculated for them.
When calculating the score, a mismatch is given a score of 1, bulge: 2, and wobble: 0.5.

Predicted miRNA targets
gi|150429887|gb|ES888480.1|ES888480 NBT073_2007-04-19/NBT073_B05_023_1 Nicotiana benthamiana trichomes Nicotiana benthamiana cDN

TGTGTTCTCAGGTCGCCCCT
|||| ||||||| .|||||
ACACTAGAGTCCCTTGGGGA

EST sequence (targeted fragment marked with yellow):
ACAGACATATTTGACTTCTATCTTCCTCTCTTTCNCTCTCTAGCCATTCAAGGGGTTCCCTGAGATCACACATACAAAAATGGTGAAAGCCGTTGCCGTCCTTANCAGCAGTGAAGGTGTTAGTGGCACCATCTTCTTCACTCAGGATGGAGATGCACCAACCACAGTTACTGGAAATGTCTCTGGCCTAAAACMCGGATTTCATGGCTTCCACGTCCATGCCCTTGGTGATACCACAAATGGCTGCATGTCAANAGGACCACATTACAATCCTGCTGGTAAGGAGCATGGTGCTCCTNAANATGAGGTGCGTCATGCTGGTGATCTTGGTAACATCACAGTTGGGNAAGATGGTACTGCATCTTTTACCATTACTGACAANCAGATTCCTCTTGCTGGTCCACAATCCATCATTGNAAGAGCTGTAGTTGTTCATGCTGATCCTGATGACCTTGGAAAGGGAGGACACGAGCTCAGTAAAACCACTGGAAATGCTGGTGGAAGGGTTGCTTGNGGTATCATCGGCCTCCAGGGTTAATTACTCATGTACCATGAAGATTCTCGGCTACTACTANTGGANGGATCTTTGAATAAGGTTTCATTGGAGCTATTGAGCATTGTTTTCTATGTTTCNTGTGATGCTTTTTGTTTTTGANGNGAACCANTCATACATGATGTANATCTAATTTNNNGTGTGTGAGTTGTACTAGTTTTCNG



gi|47511051|gb|CN746054.1|CN746054 SAL_US001xd05r1.ab1 SAL_US N.Bentheme Nicotiana benthamiana cDNA 3', mRNA sequence

TGTGTTCTCAGGTCGCCCCT
||| |||||||||| | ||.
ACAGAAGAGTCCAGGGTGGG

EST sequence (targeted fragment marked with yellow):
CGTTTTTGAAAATGTCTTCCTGTGGAGGAAACTGTGGTTGTGGATCTGGCTGCAAGTCCGGCAACGGCTGTGGCGGATGCAAGAATTACCCAGATTTGAGCTACAACGAAAGCACCCCAACTGAGAGTTTGGTGCTTGGGGTGGGACCTGAGAAGACAAGCTTCGGCACAATGGTAATGGGTGAATCCCCTGCTGCTGAGAATGGCTGCAAATGTGGATCTGACTGCAAGTGTAACCCTTGCCCTTGTTCTAAATGACCAATTTAAATCTTAATCAACCAGAGATGGATGTTAGCCTTTTATGGCTAAGCCACCAAATAACTATAGTTTTAAAAATGTCTAGTTTATTGTTCTTGTGTCTGTTGAAAACAGGGGGAAATTATGTGTTTTTTCCTCTCTAATAAGAAATAGTAATTGAGAGTCTGACCAATGTTTGGGTTCTTGTTATTGTGGTGTTGTGTATACAAGTAGTTGTGTGGTTTGTAACATGAGCATCTCGACCTATGTTTTGGAGTATTTGGGTTGGTTTCAACTAATTGAAGA



gi|47511117|gb|CN746120.1|CN746120 SAL_US032xb04f1.ab1 SAL_US N.Bentheme Nicotiana benthamiana cDNA 5', mRNA sequence

TGTGTTCTCAGGTCGCCCCT
||| |||||||||| | ||.
ACAGAAGAGTCCAGGGTGGG

EST sequence (targeted fragment marked with yellow):
GCACGAGGGTTGTTCTTAAATTTGCATATTTCTTATCAACAAAACACTTTCTCGATTTTGAAAATGTCTTGCTGTGGAGGAAACTGTGGTTGTGGATCTGCCTGCAAGTGCGGCAACGGCTGTGGCGGATGCAAGATGTACCCAGATTTGAGCTACAGCGAAAGCACCGCAACCGATACTTTGGTGCTTGGGGTGGGACCTGAGAAGACAAGCTTCGGCACAATGGAAATGGGTGAATCCCCTGTTGCTGAGAATGGCTGCAAATGTGGATCTGACTGCAAGTGTAACCCTTGCACTTGTTCTAAGTGAACAAATTAAATCTTAATTAAGCAGAGATGGATGGATGTTAGCCTTTTATGGCTAAGACTAAAAAATAACTATAGTTTTAAAAAAATGTTTAGTTTATAGTTCTTGTGTCTGTTGAAAACAGGAGGAAATTATGTGTTTTTTCCTCTGTAATAAGTAGTAATTGAGTCTGAACAATGTTTGGATTCTTATTATTGTGGCGTTGTGTATACAAGTAGTTGTGTGGTTTGTAACATGAGCATCTCTGCTTCTGGTAATTTAACCTATGTTT



gi|47510693|gb|CN745696.1|CN745696 SAL_US030xm07r1.ab1 SAL_US N.Bentheme Nicotiana benthamiana cDNA 3', mRNA sequence

TGTGTTCTCAGGTCGCCCCT
||| |||||||||| | ||.
ACAGAAGAGTCCAGGGTGGG

EST sequence (targeted fragment marked with yellow):
GACTTTGGTGCTTGGGGTGGGACCTGAGAAGACAAGCTTCGGCCCAATGGAAATGGGTGAATCCCCTGTTGCTGAGAATGGCTGCAAATGTGGATCTGACTGCAAGTGTAACCCTTGCCCTTGTTTTAAGTGACCAAATTAAATTTTAATTAACCAGAGATGGATGGATGTTAGCCTTTTATGGTTAAGACTAAAAAATAACTATAGTTTTAAAAAAATGTTTAGTTTATAGTTCTTGTGTCTGTTGAAAACAGGAGGAAATTATGTGTTTTTTCCTCTGTAATAAGTAGTAATTGAGTTTGACCAATGTTTGGATTTTTATTATTGTGGCGTTGTGTAAACAAGTAGTTGTGTGGTTTGTAACATAAGCATCTCTGCTTCTGGTAATTTAACCTATGTTTGGAAGTGGTTGTTGTTTGGTTTCAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAACTCAAGGGGGGGGCTCTGTA



gi|227574624|gb|GO609158.1|GO609158 NBLEL3_JP_007_D12_25JUN2004_090 NBLEL3 Nicotiana benthamiana cDNA, mRNA sequence

TGTGTTCTCAGGTCGCCCCT
||||||||||| ||.|||||
ACACAAGAGTC-AGTGGGGA

EST sequence (targeted fragment marked with yellow):
GAGTTTTGAAGGGGCTCCAAAAAAAGTCAGGGAACGATCCGCTGATCAGGGACAATCAAACAGTAAGGTTTCGAGTTTGTTTGGCGGAACTCAAGATAAATGTGTTGCTTGCAAGAAAACTGTCTACCCCCTGGAAAAGGTAGCAGTGGATGGAACTTCATACCACAGGGCTTGTTTCAAATGTAGCCATGGGGGATGTGTGATCAGCACATCAAACTATGTAGCTCATGAACATAAGCTATACTGTAGGCACCATCACACTCAACTCTTCAAGGAGAGAGGTAACTTCAGCCAGATGGAAGACCATGACAAAATTAAAGGGGTGACTGAGAACACAAAAGCATAGTCTTGCCTTGAACATTTTCATGTTCACTTGAGTTTGTAATAATCGGCTTTCAAGTGAGGGCTGGACCAGTTTGTT



gi|157985276|gb|EX533548.1|EX533548 NBT093_2007-07-03/NBT093_C06_022_1 Nicotiana benthamiana trichomes Nicotiana benthamiana cDN

TGTGTTCTCAGGTCGCCCCT
||| |||||||||| | ||.
ACAGAAGAGTCCAGGGTGGG

EST sequence (targeted fragment marked with yellow):
GGNNTTACGGCCGGGNANCTCAACACACTTGTTTTCTTAAATTTGCATATTTCTTATCAACAAAACACTTTCTCGATTTTGAAAATGTCTTGCTGTGGAGGAAACTGTGGTTGTGGATCTGCCTGCAAGTGCGGCAACGGCTGTGGCGGATGCAAGATGTACCCAGATTTGAGCTACAGCGAAAGCACCGCAACCGAGACTTTGGTGCTTGGGGTGGGACCTGAGAAGACAAGCTTCGGCACAATGGAAATGGGTGAATCCCCTGTTGCTGAGAATGGCTGCAAATGTGGATCTGACTGCAAGTGTAACCCTTGCACTTGTTCTAAGTGAACAAATTAAATCTTAATTAAGCAGAGATGGATGGATGTTAGCCTTTTATGGCTAAGACTAAAAAATAACTATAGTTTTAAAAAAATGTTTAGTTTATAGTTCTTGTGTCTGTTGAAAACAGGAGGAAATTATGTGTTTTTTCCTCTGTAATAAGTAGTAATTGAGTCTGAACAATGTTTGGATTCTTATTATTGTGGCGTTGTGTATACAAGTAGTTGTGTGGTTTGTAACATGAGCATCTCTGCTTCTGGTAATTTAACCTATGTTTGGAAGTGGTTGTTGTTTGGTTTCAACTAATTGTAGAACTTACTTCCTTGTTAAAAAAAAAAAAAAAAAAAAAAAAAAAAAACNTGT



gi|39885241|gb|CK298152.1|CK298152 EST760866 Nicotiana benthamiana mixed tissue cDNA library, normalized, full-length Nicotiana

TGTGTTCTCAGGTCGCCCCT
|||||| |||||| |||||
ACACAAAAGTCCATCGGGGT

EST sequence (targeted fragment marked with yellow):
ATATACATCAGCTACAAAAGAGGAAACTTAATTATTATATCAAGAAAGATCCAATTGGGGCTACCTGAAAACACAACAAATATGGTTGCAAGGATGAATATTGCAAGAATTGCACTAGTTTTAGTGGCAATTTTGGTGGCATTGCCGGGGAAAATAACAGCAGTTGATCATGTGGTTGGCGATAATAGTGGTTGGGGAATTCCTTCAGGTGGCCCTTCAACTTATGTCAATTGGGCTTCACAACGTACCTTCAGAGTTGGTGATACTTTAGTGTTCAACTTTGCAACTGGAGCACATGACGTAGCCAAAGTCACAAAGAGTGCATTTGATTCTTGCAGCTCCACAGGTCCAGTTACTCTTATAACTGTTGGACCAGCCAATATTACTCTCAATTCCACAGGAACAGAATATTTCATTTGCACTTTTGGCCAACATTGTTCTGCTGGCCAAAAACTAGCCATCAATGTTACAGCATCTTCCACTTCTAGCCCTAGTCCTGCACCCTCCCCTACTACCACCCCTGCTCCATCACCCGTCCCAACCCCGACCCCTACCCCTACGCCTACTCCTGCACCGTCTGCACCTTCCCCGACCCCAATGTCAACGGCAACGCCAACGCCAAGTCCATCGCCATCAATGGGACCATCTGCACCAACTCCTACTCCTAGTGGCGGTGCAGGAACTTCACCATCGTCCTCTCCAACCTCTAGCCCGATCACACCGGGGACTACTCCTTCACCCGAGACACCTCCCGAAGGACTAATTCCTCCACCGGCTCCTAGCTCTGCCCCGAGGAACGTCTTTGCTCCTGCATTGATCATGTTCATGTCTATTGCCATTAGTATCTTGTGGTAGATTCTTGTATTTATATATATATCGGACTTTTCTAGCACGGAGGAGC



gi|47507758|gb|CN742761.1|CN742761 SAL_US001xd05f1.ab1 SAL_US N.Bentheme Nicotiana benthamiana cDNA 5', mRNA sequence

TGTGTTCTCAGGTCGCCCCT
||| |||||||||| | ||.
ACAGAAGAGTCCAGGGTGGG

EST sequence (targeted fragment marked with yellow):
TTGAATTTGCATATATCTTANAACAAAACACTTTCTCGTTTTTGAAAATGTCTTGCTGTGGAGGAAACTGTGGTTGTGGATCTGGCTGCAAGTGCGGCAACGGCTGTGGCGGATGCAAGAATTACCCAGATTTGAGCTACAACGAAAGCACCACAACTGATATTTTGGTGCTTGGGGTGGGACCTGAGAAGACAAGCTTCGGCACAATGGTAATGGGTGAATCCCCTGCTGCTGAGAATGGCTGCAAATGTGGATCTGACTGCAAGTGTAACCCTTGCACTTGTTCTAAATGAACAATTTAAATCTTAATCAAGCAGAGATGGATGTTAGCCTTTTATGGCTAAGACAACAAATAACTATAGTTTTAAAAATGTCTAGTTTATTGTTCTTGTGTCTGTTGAAAACAGGGGGAAATTATGTGTTTTTTCCTCTCTAATAAGAAATAGTAATTGAGAGTCTGAACAATGTTTGGGTTCTTGTTATTGGGGTGTTGTGTATACAAGTAGTTGTGTGGGTTGTAACATGAGCATCTCGACCTATGTTTT



gi|150428680|gb|ES887273.1|ES887273 NBT049_2005-09-23_1/NBT049_F10_1 Nicotiana benthamiana trichomes Nicotiana benthamiana cDNA,

TGTGTTCTCAGGTCGCCCCT
||| |||||||||| | ||.
ACAGAAGAGTCCAGGGTGGG

EST sequence (targeted fragment marked with yellow):
GGGGATCCTCAAACACACTTGTTTTCTTAAATTTGCATATTTCTTATCAACAAAACACTTTCTCGATTTTGAAAATGTCTTGCTGTGGAGGAAACTGTGGTTGTGGATCTGCCTGCAAGTGCGGCAACGGCTGTGGCGGATGCAAGATGTACCCAGATTTGAGCTACAGCGAAAGCGCCGCAACCGAGACTTTGGTGCTTGGGGTGGGACCTGAGAAGACAAGCTTCGGCACAATGGAAATGGGTGAATCCCCTGTTGCTGAGAATGGCTGCAAATGTGGATCTGACTGCAAGTGTAACCCTTGCACTTGTTCTAAGTGAACAAATTAAATCTTAATTAAGCAGAGATGGATGGATGTCAGCCTTTTATGGCTAAGACTAAAAAATAACTATAGTTTTAAAAAAATGTTTAGTTTATAGTTCTTGTGTCTGTTGAAAACAGGAGGAAATTATGTGTTTTTTTCCTCTGTAATAAGTAGTAATTGAGTCTGAACAATGTTTGGATTCTTATTATTGTGGCGTTGTGTATACAAGTAGTTGTGTGGTTTGTAACATGAGCATCTCTGCTTCTGGTAATTTAACCTATGTTTGG



gi|150428039|gb|ES886632.1|ES886632 NBT038_2005-09-16_1/NBT038_E11_1 Nicotiana benthamiana trichomes Nicotiana benthamiana cDNA,

TGTGTTCTCAGGTCGCCCCT
||| |||||||||| | ||.
ACAGAAGAGTCCAGGGTGGG

EST sequence (targeted fragment marked with yellow):
GGGGATCCTCAAACACACTTGTTTTCTTAAATTTGCATATTTCTTATCAACAAAACACTTTCTCGATTTTGAAAATGTCTTGCTGTGGAGGAAACTGTGGTTGTGGATCTGCCTGCAAGTGCGGCAACGGCTGTGGCGGATGCAAGATGTACCCAGATTTGAGCTACAGCGAAAGCACCGCAACCGANACTTTGGTGCTTGGGGTGGGACCTGAGAAGACAAGCTTCGGCACAATGGAAATGGGTGAATCCCCTGTTGCTGANAATGGCTGCAAATGNGGATCTGACTGCAAGTGTAACCCTTGCNCTTGTTCTAAGTGAACAAATTAAATCTTAATTAAGCAGAGATGGATGGANGTTAGCCTTTTANGGCTAAGACTAAAAAATAACTATNGTTTTAAAAAAATGTTTAGTTTATAGTTCTTGTGTCTGTTGAAAACAGGAGGAAATTATGTGTTTTTTCCTCTGTAATAANNNAGTAATTGAGTCTGAACAATGTTNGNNTTCTTATTATTGTGG



gi|157985166|gb|EX533438.1|EX533438 NBT091_2007-07-10/NBT091_D10_037_1 Nicotiana benthamiana trichomes Nicotiana benthamiana cDN

TGTGTTCTCAGGTCGCCCCT
||| |||||||||| | ||.
ACAGAAGAGTCCAGGGNGGG

EST sequence (targeted fragment marked with yellow):
CCTCAAACACACTTGTTTTCTTAAATTTGCATATTTCTTATCAACAAAACACTTTCTCGATTTTGAAAATGTCTTGCTGTGGAGGAAACTGTGGTTGTGGATCTGCCTGCAAGTGCGGCAACGGCTGTGGCGGATGCAAGATGTACCCAGATTTGAGCTACAGCGAAAGCACCGCAACCGAGACTTTGGTGCTTGGGGNGGGACCTGAGAAGACAAGCTTCGGCACAATGGAAATGGGTGAATCCCCTGTTGCTGAGAATGGCTGCAAATGTGGATCTGACTGCAAGTGTAACCCTTGCACTTGTTCTAAGTGAACAAATTAAATCTTAATTAAGCAGAGATGGATGGATGTTAGCCTTTTATGGCTAAGACTAAAAAATAACTATAGTTTTAAAAAAATAGTTAGTTTATAGTTCTTGTGTCTGTTGAAAACAGGAGGAAATTATGTGTTTTTTCCTCTGTAATAAGTAGTAATTGAGTCTGAACAATGTTTGGATTCTTATTATTGTGGCGTTGTGTATACAAGTAGTTGTGTGGTTTGTAACATGAGCATCTCTGCTTCTGGTAATTTAACCTATGTTTG



gi|47509730|gb|CN744733.1|CN744733 SAL_US006xg24r1.ab1 SAL_US N.Bentheme Nicotiana benthamiana cDNA 3', mRNA sequence

TGTGTTCTCAGGTCGCCCCT
||| |||||||||| | ||.
ACAGAAGAGTCCAGGGTGGG

EST sequence (targeted fragment marked with yellow):
GCACGAGGCTTATCAACAAAACACTTTCTCGTTTTTGAAAATGTCTTGCTGTGGAGGAAACTGTGGTTGTGGATCTGGCTGCAAGTGCGGCAACGGCTGTGGCGGATGCAAGAATTACCCAGATTTGAGCTACAACGAAAGCACCCCAACTGAGAGTTTGGTGCTTGGGGTGGGACCTGAGAAGACAAGCTTCGGCCCAATGGTAATGGGTGAATCCCCTGCTGCTGAGAATGGCTGCAAATGTGGATCTGACTGCAAGTGTAACCCTTGCACTTGTTTTAAATGAACAATTTAAATTTTAATCAAGCAAAGATGGATGTTAGCCTTTTATGGCTAAGACAACAAATAACTATAGTTTTAAAAATGTCTAGTTTATTGTTCTTGTGTCTGTTGAAAACAGGGGGAAATTATGTGTTTTTTCCTCTCTAATAAAAAATAGTAATTGAGAGTCTGAACAATGTTTGGGTTCTTGTTATTGTGGTGTTGTGTAAACAAGTAGTTGTGTGGTTTGTAACATGAGCATCTCGACCTATGTTTTGGGAGTATTTGTGGTTTGGTTTCAACTAATTGAAGAACTTACTTCCATGTTAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAACCGAGNGGGGG



gi|150429966|gb|ES888559.1|ES888559 NBT074_2007-04-20/NBT074_G08_026_1 Nicotiana benthamiana trichomes Nicotiana benthamiana cDN

TGTGTTCTCAGGTCGCCCCT
|||| ||||||| .|||||
ACACTAGAGTCCCTTGGGGA

EST sequence (targeted fragment marked with yellow):
TTACNGCCGGGNNNNACAGACATATTTGACTTCTATCTTCCTCTCTTTCTCTCTCTAGCCATTCAAGGGGTTCCCTGAGATCACACATACAAAAATGGTGAAAGCCGTTGCCGTCCTTAGCAGCAGTGAAGGTGTTAGTGGCACCATCTTCTTCACTCAGGATGGAGATGCACCAACCACAGTTACTGGAAATGTCTCTGGCCTAAAACCCGGATTTCATGGCTTCCACGTCCATGCCCTTGGTGATACCACAAATGGCTGCATGTCAACAGGACCACATTACAATCCTGCTGGTAAGGAGCATGGTGCTCCTGAANATGAGGTGCGTCATGCTGGTGATCTTGGTAACATCACAGTTGGGGAAGATGGTACTGCNTCTTTTACCATTACTGACANNANATTCCTCNTGCTGNTCCAC



gi|39878897|gb|CK294973.1|CK294973 EST757687 Nicotiana benthamiana mixed tissue cDNA library, normalized, full-length Nicotiana

TGTGTTCTCAGGTCGCCCCT
|||||| |||||| |||||
ACACAAAAGTCCATCGGGGT

EST sequence (targeted fragment marked with yellow):
GTTATATACATCAGCTAGTCAGCTACATAACAAGAAAGATCCAATTGGGGCTACCTGAAAACACAAAAAATATGGTTACAAGAATGAATATTGCAAGAATTGCACTAGTATTAGTTGCAACTTTGGTGGCGTTGCCGGGAAAAATAACAGCAGTTGATCATGTGGTTGGCGATAGTAATGGTTGGGGAATTCCTTCAGGTGGACCTTCAACTTATGCTAATTGGGCTTCACCACGTACCTTTAGAGTTGGTGATACTTTAGGTATGTATTATTACGTATTCCACACCTCTTTCTCTTACACAATTAGTGCATTATTTGAGATAGTTGAAAATTTTGGATCAATAATAATTCCCCATAAGTCATAAGTAGAACGTTTATTATAGTTACTGTTATACCTTAGACGTCAATTAGTGTTTAGCAATCATACACCAATATGTCTGCATACCGAAATAAGTAGATGCAGAATATTAACTATTTGAAAGGTAACTAAAATTAGCAGCCAAACATTGATTATTATCACTTGATAGGCCTTTCAATTTACTAATTGATTTGAAAGAGCTCGTCACTATAATTTTCTTTTTCTAGCTAAAAGATCAGAACCAGTTAGACTTAGGTGCTATGAAATTTTCAGCAAACTTGAATTTTGTAGAAAGAAAGATTAACAAAGATAAAAAAATCAGGAGTCTTTTAATCCTGTCAAAGATATGTATACTGGTAGATATATACAGAACTTCTATGCTTTTTAGTTCTATGTTTTAAATCATTGGACTTTATTGGAAACAGCCTCTCTGCCCTTTCGGGTAGGGGTAAGGCTTGTCTACATATTACCCTCCCTAGACTCCACCTGGTGGGAGTATACTGGGTAGTTTGTGTTGTTTTTAATCATTGGACTATGAGGATTAAGCTTTAATGTGATATACAACAACAATCGATTATATTTCACAAAGTGGGATCTGGGGAAG



gi|227561559|gb|GO600233.1|GO600233 NBERO1CH_T3_001_F06_11APR2006_038 NBERO1CH Nicotiana benthamiana cDNA, mRNA sequence

TGTGTTCTCAGGTCGCCCCT
||| |||||||||| | ||.
ACAGAAGAGTCCAGGGTGGG

EST sequence (targeted fragment marked with yellow):
CTTGAATTTGCATATATCTTATCAACAAAACACTTTCTCGTTTTTGAAAATGTCTTGCTGTGGAGGAAACTGTGGTTGTGGATCTGGCTGCAAGTGCGGCAACGGCTGTGGCGGATGCAAGAATTACCCAGATTTGAGCTACAACGAAAGCACCACAACTGAGAGTTTGGTGCTTGGGGTGGGACCTGAGAAGACAAGCTTCGGCACAATGGTAATGGGTGAATCCCCTGCTGCTGAGAATGGCTGCAAATGTGGATCTGACTGCAAGTGTAACCCTTGCACTTGTTCTAAATGAACAATTTAAATCTTAATCAAGCAGAGATGGATGTTAGCCTTTTATGGCTAAGACAACAAATAACTATAGTTTTAAAAATGTCTAGTTTATTGTTCTTGTGTCTGTTGAAAACAGGGGGAAATTATGTGTTTTTTCCTCTCTAATAAGAAATAGTAATTGAGAGTCTGAACAATGTTTGGGTTCTTGTTATTGTGGTGTTGTGTATACAAGTAGTTGTGTGGTTTGTAACATGAGCATCTCGACCTATGTTTTGGGAGTATTTGTGGTTTGGTTTCAACTAATTGAAGAACTTACTTCCATGT



gi|47509464|gb|CN744467.1|CN744467 SAL_US025xk01r1.ab1 SAL_US N.Bentheme Nicotiana benthamiana cDNA 3', mRNA sequence

TGTGTTCTCAGGTCGCCCCT
||| |||||||||| | ||.
ACAAAAGAGTCCAGGGTGGG

EST sequence (targeted fragment marked with yellow):
GGAAACTGTGGTTGTGGGTCTGCCTGCAAGTACGGCAACGGCTGTGGCGGATGCAAGATGTACCCAGATTTGAGCTACAGCGAAAGCACCGCAACCGAGACTTTGGTGCTTGGGGTGGGACCTGAGAAAACAAGCTTCGGCCCAATGGAAATGGGTGAATCCCCTGTTGCTGAGAATGGCTGCAAATGTGGATCTGACTGCAAGTGTAACCCTTGCACTTGTTCTAAGTGAACAAATTAAATCTTAATTAAGCAGAGATGGATGGATGTTAGCCTTTTATGGCTAAGACTAAAAAATAACTATAGTTTTAAAAAAATGTTTAGTTTATAGTTCTTGTGTCTGTTGAAAACAGGAGGAAATTATGTGTTTTTTCCTCTGTAATAAGTAGTAATTGAGTCTGGACGATGTTTGGATTCTTATTATTGTGGCGTTGTGTATACAAGGAGTTGTGGGTTTGT



gi|157985333|gb|EX533605.1|EX533605 NBT094_2007-07-10/NBT094_C08_030_1 Nicotiana benthamiana trichomes Nicotiana benthamiana cDN

TGTGTTCTCAGGTCGCCCCT
|||| ||||||| .|||||
ACACTAGAGTCCCTTGGGGA

EST sequence (targeted fragment marked with yellow):
CAGACATATTTGACTTCTATCTTCCTCTCTTTCTCTCTCTAGCCATTCAAGGGGTTCCCTGAGATCACACNTACAAAAATGGTGAAAGCCGTTGCCGTCCTTAGCAGCAGTGAAGGTGTTAGTGGCACCATCTTCTTCNNTCAGGATGGAGATGCACCAACCACAGTTACTGGAAATGTCTCTGGCCTAAAACCCGGATTTCATGGCTTCCACGTCCATGCCCTTGGTGATACCACAAATGGCTGCATGTCAACAGGACCACATTACAATCCTGCTGGTAAGGAGCATGGTGCTCCTGAAGATGAGGTGCGTCATGCTGGTGATCTTGGTAACATCACAGTTGGGGAAGATGGTACTGCATCTTTTACCATTACTGACAAGCAGATTCCTCTTGCTGGTCCACAATCCATCATTGGAAGAGCTGTAGTTGTTCATGCTGATCCTGATGACCTTGGAAAGGGAGGACACGAGCTCAGTAAAACCACTGGAAATGCTGGTGGAAGGGTTGCTTGTGGTATCATCGGCCTCCAGGGTTAATTACTCATGTACCATGAAGATTCTCGGCTACTACTAGTGGAGGGATCTTTGAATAAGGTTTCATTGGAGCTATTGAGCATTGTTTTCTATGTTTCATGTGATGCTTTTTGTTTTTGAGGTGAACCAATCATACATGATGTNNATCTAATTTCCAGTGTGTGAGTTGTACTAGTTTCTGCCAACNAAACATTAACCGTAANAAAAACAGTCCTTAGCANTGCTGGTTTCTTAGATTTGAATGNTGTCAATTCAATTGGATGGTTTCNAGGCATACATTTCATATGGNATGGNAAAGACAANNAAAAAAANAANNAAAAAANAANNNNNTCNNCCNC



gi|39867975|gb|CK289462.1|CK289462 EST752184 Nicotiana benthamiana mixed tissue cDNA library, normalized, full-length Nicotiana

TGTGTTCTCAGGTCGCCCCT
|||| |||||||| ||||||
ACACTAGAGTCCAACGGGGA

EST sequence (targeted fragment marked with yellow):
GGTGAAAGTGTTCAACAGGGGCAACCTGAGATCACATATTGTCATTTTTCTTTAGTTGTTGAGTCTGGTTCAATATCTCACTATGTGTTCTCAGGTCGCCCCTGTCGAATTATTTTTCACCGAATAAGATGGTTTATCATGTTTGATATATAAGAAGATGTTTTATCGTGTTTGAGAACTTCATCCGGATGGGCTTTCTCACAATACCCATATCAAGCCCGGGTAAAGGAGAAGTGACATTGTGGTAGGCTGATAGCGAGCGTAAAACTAGTCAACTCATAGTGAATCTTCAAAATAGAGATACATGAACAACGACGATTCATATACTCGATCCTAACTTTTAGTGATGGTTCCAACTTGCTTGAAAGTTTTGACCAAGGTAAGCTTTAATATTCCACGTAGCTAATAACCGACTACGACGTATAGTTACAACATTCACGCAGGGTCCAGGGAACCTAGGTTAGGGGGTCGTTAGACCGTAGCTTGCTGCTGAAAAACGTTGCTAGGCTAGCGCGGCTCGCTTCGCTCTTCAAGCTCCGCCCCCCCTCCTCCTGCTAATGCTAGTGCAACTTTGCAACACCCTTATATGTGATGTAAAGATAAAACTAAATAATGTAATGATACTTATTTATGCAGAATGCTAGTAATAGATTTCAGAAATAATACAATTATTAGTTCTATATAATTTAAGATTTTTTCATGATTTCACTAGCTCAATAAAGCAAGGAAGTGTGTTTTCATACATAATATTACTTTAAGGAAACATGAGATAACTCTCTATAGGAAGGAAATCAAATAGCCATTTCAAGACTATTACAAAAAGAAGCTGCACTTAGGACATTAGAGATCAAGGCCCAATGCAACAAAATGCCAACATCTTCTTTTTCCTCTGCACCTCATAAAAGAAAAATAGGTAAGAGCTCAGGGTAGTTTAGAGGCGGATCCAGGATTTTATATTAAATAGTGCACATGAATAGTGACTACGAAACTTTGTGTGTGTATGAGTA