miRNEST 2.0: an integrative microRNA resource miRNEST 2.0, an integrative microRNA resource :: Browse




mature miRNA: ATGTCACATAAATTAAAATAG
species: Nicotiana tabacum
database: miRNEST
The numbers on the right side of the alignments show a score calculated for them.
When calculating the score, a mismatch is given a score of 1, bulge: 2, and wobble: 0.5.

Predicted miRNA targets
gi|156706628|gb|AM798068.1|AM798068 AM798068 COL, cold overnight library Nicotiana tabacum cDNA clone nt006001025, mRNA sequence

ATGTCACATAAATTAAAATAG
||||||||||| .||| || |
TACAGTGTATTCGATTATACC

EST sequence (targeted fragment marked with yellow):
CTAATGTGGAATTAATATTTTTATTTTATCGAGACTCATTTGGATTATGGATCAAATCACATTAAAGGATAAATGGATCTAAAATGGGTATGACCCATATTAGCTTATGTGACATTTATTTTTGGATTTTTATCATAAAATTTAATGCCATGTCATATTTATGGTTGGGATTTGAGAAAAAATGACTTTTAAGTGACAATGATAAAGTTTAGTTACTTTTAAGTGACAAAAAATAGTTATATGACTTTAGTGAAATTGAAAGATAGTTCAATGACCATCAGTGAAATTAACCATATTATAAGTGAAGTCCTGAGCCTAAGATAAAAGACCAAAATACCCATCACAAACTATTTGACCATTTTACCCTTCAGTTAAATGTTATTCTTGTAATTTTTTTGGTACAAAAATGTAACTATGTATTCTAAT



gi|254632220|gb|FS421034.1|FS421034 FS421034 normalized full-length tobacco cDNA library Nicotiana tabacum cDNA clone TBK02GR005

ATGTCACATAAATTAAAATAG
|||||||||||||| ||.||
CACAGTGTATTTAATCTTGTC

EST sequence (targeted fragment marked with yellow):
GAACAAGTCTTCTCATCATGTCTACCTCAGATAAACATAATACTCCTCAAATGGCTGCTATCACACTGCTAGGATTACTACTTGTTGCCAGCACCATTGAGATAGCAGGTTTCTGGTCAAATATTTGAACTTCCGAGCCAAAAATATTGTCTTATAATTTTGTTGGTGCAAAATCTTAATTTAGTTGATAGTTATTTGCTTATTTTTCTTATCAAATTGCTTGTGTTTTTTTCTCAAATTTACTTGCACTATATTCATTTAGCGATAGTTATTTGCTCTTTTTTCGGGTAACACTCACTCACAAGCTTTTCAAATTTGAGGGGAGGGCGGTGAATCTAAAATTTGAAATTTATGAGTTTAGACTAGTGTCCATTTGATTTATTGGCTAGACGTCTATTAGTTGTATAGTAAATCTTTTAACACATACACCGACCTGAGTCAAAGCTATTAGGTTCGTATTAACACATAACACATATTCCCTCTGTTCTAATTTATGTGACACACT



gi|92018860|gb|EB430716.1|EB430716 KL5B.110F15F.060117T7 KL5B Nicotiana tabacum cDNA clone KL5B.110F15, mRNA sequence

ATGTCACATAAATTAAAATAG
||||||||||| |||||.|
CACAGTGTATTTTATTTTGTA

EST sequence (targeted fragment marked with yellow):
TTGTGTATTAATACATATTTTGATTCATGTAATCTATTAAGGGCAATGCCAATCATTTTCATAACTATGGGGGTTTCTCCGTTTCTGTACCGAAACCAAGCACCCTCGATGAATGTTTTATTTTATGTGACACTTTTCTTTTAATCTATTGAGAAAAGAATGGG



gi|254630230|gb|FS386744.1|FS386744 FS386744 normalized full-length tobacco cDNA library Nicotiana tabacum cDNA clone TBK01A01NG

ATGTCACATAAATTAAAATAG
|.||||||||||||||||. .
TGCAGTGTATTTAATTTTGCT

EST sequence (targeted fragment marked with yellow):
GACTCTCACAACTATCCCACTTTGTGTAAGCAGCTTCTGTATATACATATATCATCTTACTACTACAAATTAGTAAATCAGAAGAGGATATTATGAAGTAATTATCTTCATATTTTTCATGGAGATTTCACAAAGGGTTCCTTACAGAGTTCTTTGGCATTCTGTCCACCTCCTCGATCTCCTTTTAGAATGGAAAAAAAAATAATATTTTCTTCGTTTTAATTTATGTGACGTAGTTTGAAACGATGAGAGTAAAGTGTAAAATTATGGAGGTGGGCATACTGCCAACAGATTTCTGTTGGTTTCTCTTTGCGAAACCCTCGTGATTTATCTATATAACACGTTCTTCATGTTGTTGCTTTGTTTTCCCCCAGATTTTGCGCTGATAATAAGTAGGGTTTTGGAATTTCAGAGGTAGCAAAAAGACAAATCTTCATTATTTGGATTCAGTTTTAGGTCTTTTTTATCTTTTTCTTTTGTTGTCTGTTTTCAGTTCATAGATTGAGTTTAAATAGAGAAGTGAGCATTAATATAGCCGATTCCAACTTATTCCAAATTGAGTAGCAGTTCTTGTTATTGTATCATCCATCTCATGCAA



gi|156706689|gb|AM792601.1|AM792601 AM792601 DL, diurnal library Nicotiana tabacum cDNA clone nt005111030, mRNA sequence

ATGTCACATAAATTAAAATAG
||||||||.||||||| || |
TACAGTGTGTTTAATTATAAC

EST sequence (targeted fragment marked with yellow):
TGTAGCTATTCTAACGCCCAATAATTTTCCAAACGTACTTGAAAAGAAGTTTATACAAAGTTACTCTTTAAAAAATATATTGAATGGAGACGGAGAAAACAAACGTACTGAATGGAAGCTCCTGATCGAGACAGCATCTACCAAAAAGACTATATTCCAATGCAACCTGAGCAAGAATTATTACTGAACACATAATTTTCAGCAGTGACTGGACTCATCCTTCTCACTTCTTTTGTTTCAAAAAGATTCATCAGGCAGGTTCTCTAGCTGGTACTCCACAGAACATAACAAGTATCAGCTTTGCACATAATTCCCGATAGCCTACTGATAGTGTTACCATATACTATTTGACGAATACAAAGTGCCCTCAGCCTGGATCCCAGAGTAACCTTTGTGAAGGCCTGGCCCAATTGCTTCTTCTCGGCCCAATATTAATTTGTGTGACATCCTTGTCAGTATCCATATTGGGGTGGGCTAGATTATTCAT



gi|156689232|gb|AM819728.1|AM819728 AM819728 DL, diurnal library Nicotiana tabacum cDNA clone nt005165077, mRNA sequence

ATGTCACATAAATTAAAATAG
||||||||.|||. || ||||
TACAGTGTGTTTGTTTATATC

EST sequence (targeted fragment marked with yellow):
CGGCCGCTGGGACGAAGGTCTGTTGGGGCATCTGGGGTGGATAGAAGGGTAGTTCCGGTGTGTTTTGTGGTGTTTGGTAGGGAAAGTAGAGGAATGGTTGGGTCTGTTGTGGTTGCATGTGGGGGAGTGGCGCTTGAGTACTTAGCATCTGACCATAGTGAGGAAAAGTAATCACATGTAGAGGGTTTAGCAGAAGGTGCTCTTCTTAATTCCTATATTTGTTTGTGTGACATAGATACTGTCAGGAGATATTTGAAAATCTACAGTCAATAAATGATGTTTCTATTTTAGAAAGTTTCTTCTTAATTTAATTTTTTTTGTAAATTTAATATAATCAAATTCTCCAAGTCCACTAGATGTGGAGGTTTAACCTACAGTACTAAATGAGGAGGTTTAACCTACAGTACTCTTTCTAATGTCATATTTCTTGACTTATTTTGATCACAATGTCAAATTTTTTTATAGGACACTAGCATGCAGCCAAGGTGCCAATGTGGTAGGATATCATATGGGATAGGT



gi|94324551|gb|EB678153.1|EB678153 KG9B.103L16F.051128T7 KG9B Nicotiana tabacum cDNA clone KG9B.103L16, mRNA sequence

ATGTCACATAAATTAAAATAG
||.|||||.|||||||| .|.
TATAGTGTGTTTAATTTAGTT

EST sequence (targeted fragment marked with yellow):
CATTACGGCCGGGGGGGGGATGATAGTCAAGGGGGAAAAAGAGAAAAGAGAGAGAAAACGGATCTGTGGGATTAAAGAAAAAGAGCTTAGTCGCGGATCTCACCCGGGTCTTCTTCTCTAAGCTTTCTTCCTCAAAATCTCTTTCAATCAGTTTGAACCATGAAAAGCACAGCCATGTAAAACCACTCCCGTCAACTCACTGCTTTGTCGTCGCCTCGCCGGATTTCCACCATCGTCGGCCAGCTCTTTTCCGCAGTAAAAATCAGCTCCTTTACCCCCAAAATCGACCACCACAAACACCTAAGAACAGCCACTAAACCACCTGAAAACATCACCCAAAAATGCTGTCAAAACCAACCCCCTTTTTGGTCCATAATGACCCCAAAACAGCTGCCGAATCAGCCCCAAAGAAGCTTCAAATTTAGCTGAAAAACAACCCTCTTTCCTCACAAAACAACAATATTTTTGGTCGGGTTCGAGTCGAATTTTCCGACGAGCTTTACCCGGCGAGTTTCGAGATTTCGGCGGGGTCGCCTTCAGATCCGGTTGTCATTCAATTTGTTCTAACCAAAATTCTGATTCTGGCTTTGCCTCATTAATACAAAGGTTCATCTCCCTTTTTGATTTTGTTCTTCTTTCTAATGTTCTGGATCATTTTTGTATTGATTTAATTTGTGTGATATGGATGACTTTTGTTTTCTTAGTTTTCTGTGTTTGAACAGTACGCTTTTGAGTATGTTTCCTCTTAGTTCATTCCTTTAGTTTCCTTAGCAAGTCATATGGTTAATCTCATTAATAACCCATTTTTTTCTTATCTATTTTGAGTAGTTTAAGCAATTTATCTTGTGAAGTGATGATATGGGAGCTTTAAGTTACAAGAATTTTCTTCAA



gi|156665143|gb|AM817243.1|AM817243 AM817243 COL, cold overnight library Nicotiana tabacum cDNA clone nt006180027, mRNA sequence

ATGTCACATAAATTAAAATAG
|||||| ||||||| |||. |
TACAGTATATTTAAATTTGCC

EST sequence (targeted fragment marked with yellow):
CTCATGCGGCCGCTCAGGTGTCAAGTAAAGGTTTGTCCAATCTCCGAAACATTTGAAACATGATCAATTTAAGTCATATACGTAGTGTAAAGACTTTTTAACTATTGATGATGTAGTTTAATTTACTGCGATAGCAGGCGGTTATCATCTTTACCAGGTATCTAATAATTCTTACTGCTTATCACACAGATTACTTGTAAATGTGATTACCTTATACTTCCTCCGTTTAAATTTATATGACATTACTAGTTTACCTCTAGCACGAAGATTTAAAAAAAATAAGATTTCTAAATTTGTGATTTTAAAAGCTTAAAGGGCAAAAGCTTTGTGGAGCCGTAACATTTGTGTGGCTATAAAAGTTTCTTATTAAAAATAAAATGGGTAAAATACAAAATCCAAAGTTAAATTTTCCAAATATAAAAATATTTCATTCTTTTGGAACAGACTAAATTATGAGAGTCTGTCCTAAAAATTGATATAGAGGGAGTATGTTATAACTGATTTAATGGTGTACATA



gi|254653896|gb|FS377955.1|FS377955 FS377955 normalized full-length tobacco cDNA library Nicotiana tabacum cDNA clone TBK01A01NG

ATGTCACATAAATTAAAATAG
|||.|||||||||||| |.|.
TACGGTGTATTTAATTCTGTT

EST sequence (targeted fragment marked with yellow):
GATCAAAAACTCATGAAATTGAAGGACGAAGAATAGAAATCATTTCAAGTAGGTATAGTTACCTATTAAGCTTTATTTATAAGTATTACTCCCCTTGTCTTAATTTATGTGGCATTGTCTAAACTTTGAGGGCAAAATAAAAATTTTCTTGATTTTATATGTCCTTTAAATATTTAAAATTATTAACTATTGTAATTTATAGTATTTTTCGTAGTTTTTAAATATTTAAATTTTATTTCAAAAAATTTATATTGGAATTTATGATTTAAAAAATAAAAAGTTTGACTTGGGAAATTTATACATGTAGAGAATATCTTTTTGCTGGCAGACGAGGGAAATTTTGAATAACCCACAAAAGCGAACCTAATCTGAAAAATTTACCCTTTCTGAGAGGCTGAAAATGCAGTTAGCTAGCTACAAACAAACAAACAGTTCTCTGTTCTCTGTTCTCTGTTCTCCTGTTCTCTGTTCTCTTGTCCTTGTAGGAGTAGTAGTAGGCTGTAACAAGGTTGGCG



gi|94324396|gb|EB677998.1|EB677998 KG9B.103F01F.051128T7 KG9B Nicotiana tabacum cDNA clone KG9B.103F01, mRNA sequence

ATGTCACATAAATTAAAATAG
||||||||||| |||||.|
CACAGTGTATTTTATTTTGTA

EST sequence (targeted fragment marked with yellow):
GGCCATTACGGCCGGGGACGCCACAATCCAGCAGAAGCTCCATTTTAGGAATTCGATAAAGCTCATATACAAAGTACTACTACTCGTACTGATCAAAGGAGAATACATGGCATCTTTGGCAACAGCAGAAGTTTGTGATGTAAATGCAGGGCTTCTGTCAAATGGCGACCTGCGAGTTTTGCCACCTATCTTCCAAATATACGGGCAAAGTCGAGCTTTCTCTGGCCCCATTACAACCCTTAAGGTGTTTGAGGACAATGTGTTGGTCAGGGAGCTTCTTGAAACTAGAGGCGAAGGACGAGTTCTGGTTATAGATGGTGGAGGGAGCATGCGATGTGCTCTAGTAGGCGGGAACTTAGGACAATTAGCCCAGAATATGGGTTGGGCAGGTATTGTAGTTAATGGCTGCATTCGCGATGCAGACGAGATTAATGGCTGTGACATTGGCGTTCGTGCATTGGCATCGCACCCTCAGAAATCGAACAAGAAAGGCCATGGTGAGAAACATGTTCCTGTTTATATTGGAGGGATGTTGATTCGTGAAGGAGAGTGGTTATATGCAGATAGTGATGGCATCCTCGTATCGAAAACTGAATTGTCTGTCTAATTCGAAAATCATGCGGTTCTCTGCTCCAGCTCGTGTCTTTAGTTTTATGATCAAAGTCCTATGGCAAGTGAAATCATAGTCTTGTGTTGTGTATTAATACATATTTTGATTCATGTAATCTATTAAGGGCAATGCCAATCATTTTCATAACTATGGGGGTTTCTCCGTTTCTGTACCGAAACCAAGCACCCTCGATGAATGTTTTATTTTATGTGACACTTTTCTTTTAATCTATTGAG



gi|156645112|gb|AM794211.1|AM794211 AM794211 COL, cold overnight library Nicotiana tabacum cDNA clone nt006034004, mRNA sequence

ATGTCACATAAATTAAAATAG
|||.||||||| || |||| |
TACGGTGTATTCAAATTTAAC

EST sequence (targeted fragment marked with yellow):
GCCGCTCGAAATATTTGGGTTATGGGTCAAATCACATTAAGGGAGAAACGGATCTAAAGTGGGTATGGTCAATTTAAACTTATGTGGCATTTATTTTTGGATTTTTCTCATTAAATTTTATGTCATGTCATATTTATGGTAGAAGTTTGAGCCAAAATGACTTTTAAGTGATAATGATAAAGTTTAGTTACTTTTAAGTGACAAAAAATAATTGAGTGACTTTAGTAAAATTGAAAGATAGTTGAATGACGATCAGTGAAATTAACCCCAATTCTTTGGTGCGTAGAAGTAGAACGTGCAAGGCAACGATATGATAGCACATTTGCCTAACCAAAGATAAGTAGATAACATTCAATATCATTGAAAGCAACGTGCGAAAGCATGAGGACCAATAGTTTAAACATATGTGCTTTGCTAGTTAAA



gi|156695151|gb|AM812433.1|AM812433 AM812433 COL, cold overnight library Nicotiana tabacum cDNA clone nt006064088, mRNA sequence

ATGTCACATAAATTAAAATAG
|||.|||||||||| ||||
TACGGTGTATTTAACCCTATC

EST sequence (targeted fragment marked with yellow):
ATTTGATTAATCGAGTACCTAGCTAGTTCAGAGTAACAAAAAGGAGATCAGAATTTTGACTTGGGGCTAATAGTATACACTGCTTCTATCCCAATTTATGTGGCATAGTTCAAATTTCTTGTGTCAAACTTCTTAATTTACCGTGAATTGAAACATAGAATTTTTAAATTTTTTGAAATAAAATTCACATATGTAAAAACTACGTAAAAAGTACTATACGTCGCTATAATTAACAATTCAAACTATTTATAAGGAAAATCTAAAAGAATAAGAAAATGCCAGCTTATTTCCTTTTGAAGTGGATAATGAAAACTTTAATTCTCTGAAACACTTCTTAATGCAAAGACAATTGCACCTTGTGAGATTGATTGAAAATCTTACTAGAAAAGATTTCTAGGTTTTACATCTATGTAAATGTATCTGTGACACAAATCAGTACTTGAACATCAAAAAAGATATGTTCTCAAAAACCTTGATCTTAGCTGAAAGCAGAAGAATCTTGCATCAGATAAGCC



gi|254626756|gb|FS407234.1|FS407234 FS407234 normalized full-length tobacco cDNA library Nicotiana tabacum cDNA clone TBK02GR001

ATGTCACATAAATTAAAATAG
|||.|||||||||| ||.||
TACGGTGTATTTAACATTGTC

EST sequence (targeted fragment marked with yellow):
GGTATTAGACTAATACGACTTATGTAATGCATATTCAACTAATGTGATGTCTAAGTGGCATTCGGTCAATGCAATTGATAAGCGCAATCACCAATGCAATTTATATGTCTGTATTCAATGTGATTTATAAGTCGAGGTTGAATATGTGATTTACGAGTCGCATTGCTTAACATGATTTATAGTTGCATTCGACCAATGTATATCTTGCATTCAATCAATTGATTTATAAGTCGACTGACGTGATTTATAGTCGTGATACGAATAAACATTATGTCAACAAATGTGATTTATAAGTCACATTCTTTGATTGCTAGCTCCGATTTATTATCTGTGGCGATTATATGTCTGCATTCAGCTGTTACAATTTATGTGGCATTTGAGCAATGATTTATAAGTCGCCATTAACGAATGTTACGTTTAAACTTGAGCAATTTATAATCTGCTTTCTGAAATGA



gi|190135019|gb|FG634188.1|FG634188 TT-14_F17 tobacco leaf library Nicotiana tabacum cDNA, mRNA sequence

ATGTCACATAAATTAAAATAG
||||||| |||||| ||| |.
TACAGTGAATTTAACTTTTTT

EST sequence (targeted fragment marked with yellow):
TTTCCCATACCCTTGATGCTCTGCAAATTCTCTTCTCATCCCCTTTGCTCTGTAATTTCTCTCCTCATCCATTTCTCTGTTAAGTCTAGCTTAGTACTGTTATATCTCTATTTGGGTTGTTGTAATTGCGGATTGGATTGAGTAATACAATCAGTGATTCTTAGTGTTTATCGGGTTATTCCATTGGTGCTTTCATCCAGAGGTCTCTAATGGAGGACCAACAAATACTCAAGGTGTTCATTAATGACTCAATTCGGGGTTCGATTCAGGAGGTAAAGGATTCATTCACTAAACAACTTTCAGAGATGCGTGACATCATGATGGACATGGTCGCAACCAAAGCACCGGCAAGGATTAATCGACGTGAACAAGCACTGGACGTTGTTCGCCAAGGACCGGTACCAGAAACTTTCAGGCACAAGCGTGCATCGGTGGAGATTGGAAGGTTTCATGGTGAGAACCCAGAGGCTTGGATATTCCAAGCAGAGCGTTATTTTGATTTTTACAAAATCGAGGATGACGAGTGTCACACCTCCTTTTTTCCGAGGGGATAGAGAGAGTTTTTTCAATTTAAGTGACATTAATAGTCACCGGTTTATTTTTAAATCCCAAATCGAGGAAANGTGACTCTATTTTTTTGGTTTGCGAACA



gi|156669619|gb|AM791733.1|AM791733 AM791733 DL, diurnal library Nicotiana tabacum cDNA clone nt005236074, mRNA sequence

ATGTCACATAAATTAAAATAG
||.|||||.|| |.||||||
TATAGTGTGTTGAGTTTTATA

EST sequence (targeted fragment marked with yellow):
CCCCTCATGCGGCCGCTCAGATCTTGAAGTGAATTTTTCGCCTCCATCCTCTCCAGGTAGTGAAGACATTGATATTACCCTGAATGATAGAAGATATCGCAATTCCAGTAAAAAATCCCAGTTATATTCAAAGTTGAAGAGATTAATTGGGCAAAAGTAAAGATGAATCCAGTTCCTGCTAGATCTTTTGTCCAAGCAAGACTAGATGATCAGGAATGCATGTTACACTGTAGCCATCACCAGTTCCAAAACAGGCAGTACAAGATTTTCTTGGATTATATAGGTTTTTTTTTTTTTTTGAGTTTGACTACTTGATTTAAATATTTTGAGTTGTGTGATATACGCACTTCTGTGAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAATTTTTTTTTTGGCATCATACATTTTGAATATATATTCATCAAGAACTTCACTGTTTCAATTTTCATCAATCGGGTGCTACAGTGCAATGCACAACCACAAAAATCTGCTTAACCCAAGCTAACC



gi|92037134|gb|EB448839.1|EB448839 KT7C.101C10F.051216T7 KT7 Nicotiana tabacum cDNA clone KT7C.101C10, mRNA sequence

ATGTCACATAAATTAAAATAG
|||||||||||||| | |. |
TACAGTGTATTTAACTATGCC

EST sequence (targeted fragment marked with yellow):
GAGACATTAGTACAAAATCCTACTTTAGTGCAAGGAGAGAATTAAACACAGAGAAAAATGGCATCACTCAAAGCTGAGAAACCTGTTGGAACTCAACCATCTGCCCCAGCAAAGAAAGCATCTGCTAAGGCTCCTCCCGCTTCCAAATCGGCCCAGAAAAAGCCTCGTGAGCCTAAGAAGAAGGCATCAGGTAACAAGTCAGCTGCAAAAAACTAAGAAGAAGAACGAGTAATTATAAGAGTATGATGAAGAATATGGCATGCAGATCTGTTACTAATCAAGAAATGCATGGCTGCTTTTTAAACTTATGAGTGATATAGTTATTAAAGCACTGACTTGTACTTTCTTCTCTTTGGTTTCCTATTAATGGAATAATCTCATACTCGTATTTGTATTCTTTCCTTTGCCTACTTGTACATACTCCCTCCGTATCAATTTATGTGACATATTTTTCTT



gi|254623800|gb|FS423761.1|FS423761 FS423761 normalized full-length tobacco cDNA library Nicotiana tabacum cDNA clone TBK02GR006

ATGTCACATAAATTAAAATAG
||||||||||| || |||| .
TACAGTGTATTGAAGTTTAAT

EST sequence (targeted fragment marked with yellow):
GGCATTGAGAAAATTTTCAATTCTATATTAATTAAATCTCTACTATTTGCAGGAAATTAAACTGGTCATTTTCTTCAATTTCACTGATAATGGCCATGGCTAGAGAACAAAAAATCAGAGTAAAAGTGGAGTCACCAACTTCTGAATTTCAAGTTGAAGTCAAAGGAAGTGATAAAGTTAAAGACTTAATCAAGATTGTTAAAAAAGTATGGGGAAGTGATTATATGTTACTAAGGCATAATTCTGTGGAAATGCCAATTGATCAACCTTTGTCTGCCTATGATGTTNAAGATGGTTCTGTGATCAAAGTCAATGTATTTGTTGAAGCACCATGAAATTTGTAAGTCATATCAGAAATTTTTAGAGTTTGTGATGATGCAGGTTATGGTCTTAAGTTAAAGAAAAAATTTGTAATTTGAAGTTATGTGACATCGATGGGAAGTTCTAATATTTAATCTTATGCGAAAAAAAAAAACAACATGA



gi|76867818|gb|DV158811.1|DV158811 KG9B.004K13F.050721T7 KG9B Nicotiana tabacum cDNA clone KG9B.004K13, mRNA sequence

ATGTCACATAAATTAAAATAG
||||||||||| |||||.|
CACAGTGTATTTTATTTTGTA

EST sequence (targeted fragment marked with yellow):
CCGGGGACGCCACAATCCAGCAGAAGCTCCATTTTAGGAATTCGATAAAGCTCATATACAAAGTACTACTACTCGTACTGATCAAAGGAGAATACATGGCATCTTTGGCAACAGCAGAAGTTTGTGATGTAAATGCAGGGCTTCTGTCAAATGGCGACCTGCGAGTTTTGCCACCTATCTTCCAAATATACGGGCAAAGTCGAGCTTTCTCTGGCCCCATTACAACCCTTAAGGTGTTTGAGGACAATGTGTTGGTCAGGGAGCTTCTTGAAACTAGAGGCGAAGGACGAGTTCTGGTTATAGATGGTGGAGGGAGCATGCGATGTGCTCTAGTAGGCGGGAACTTAGGACAATTAGCCCAGAATATGGGTTGGGCAGGTATTGTAGTTAATGGCTGCATTCGCGATGCAGACGAGATTAATGGCTGTGACATTGGCGTTCGTGCATTGGCATCGCACCCTCAGAAATCGAACAAGAAAGGCCATGGTGAAAAACATGTTCCTGTTTATATTGGAGGGATGTTGATTCGTGAAGGAGAGTGGTTATATGCAGATAGTGATGGCATCCTCGTATCGAAAACTGAATTGTCTGTCTAATTCGAAAATCATGCGGTTCTCTGCTCCAGCTCGTGTCTTTAGTTTTATGATCAAAGTCCTATGGCAAGTGAAATCATAGTCTTGTGTTGTGTATTAATACATATTTTGATTCATGTAATCTATTAAGGGCAATGCCAATCATTTTCATAGCTATGTGGGTTTCTCCGTTTCTGTACCGAAACCAAGCACCCTCGATGAATGTTTTATTTTATGTGACACTTTTCTTTTAATCTATTGAG



gi|224702152|gb|FG629465.1|FG629465 TOBESTR096C05 TOBEST cDNA library 1 Nicotiana tabacum cDNA 5', mRNA sequence

ATGTCACATAAATTAAAATAG
||.|||||.|||||||| .|.
TATAGTGTGTTTAATTTAGTT

EST sequence (targeted fragment marked with yellow):
CAAGTTCCTGTTGCCGTCGGGATTTTTCGATTTTGTTTCGAGGTCCCGGTGGGTTCGCCTTTAGATCCGGTTGTTATTCAGTTTGTTCTGGAAAAAATTCCGGTTCTGGGTTTGCCTCTTTAATACAAAGGTTCATTTCCCTTTTCTATTTTGTTCTTCTTGCTAATGTTCTTGTTCATTTTTGTATTGATTTAATTTGTGTGATATAGATGACTTTTATTTTTTCCTAATTTTCTATGTTTGAACATTAATCTATTGAGTACGTTTCCTCTAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAGGGGGGGGCCCCTTTTAAAGAACCCAATTTTACTTCCCCG



gi|156664140|gb|AM809451.1|AM809451 AM809451 COL, cold overnight library Nicotiana tabacum cDNA clone nt006079075, mRNA sequence

ATGTCACATAAATTAAAATAG
|||||||||||||||||| |
CACAGTGTATTTAATTTTACC

EST sequence (targeted fragment marked with yellow):
CCCTCATGCGGCCGCTCGCAATGAATTGCTAGATTCAAATGAAAACAATCAGCTTTGAGTGCCAGAATAACTCACTGTAACAGCAAAATATATATAGGTGTCTAAGTCCAAGAAAATCTAAAAATCAATGATTAAATATGCTATCTATTCATTTCAAAACTAATTACAAAATTGTATGTCCCTCCATTTTAATTTATGTGACACTTTTTTTTTCATTTTGGAATTTCTCAAATGTAAGACAAATTCAATATAATAAATTTCAGAATTTATTACTCTTTAAAGCTCAAATATGAATATTTTAGGTTTTGTGTGAAGTTTACTAGAAGAAATTAATTACGTTTGACAAATTAGAAGCAATAGGGAATAGTATCAGCGAAGGGGATGTAGCTCAGATGGTAGAGCGCTCGCTTAGCATGCGAGAGGTACGGGGATCGATGCCCCGCATCTCCATTCCTCTT



gi|92038672|gb|EB450377.1|EB450377 KT7C.106I21F.051219T7 KT7 Nicotiana tabacum cDNA clone KT7C.106I21, mRNA sequence

ATGTCACATAAATTAAAATAG
|||||||||||||| | |. |
TACAGTGTATTTAACTATGCC

EST sequence (targeted fragment marked with yellow):
GAGACATTAGTACAAAATCCTACTTTAGTGCAAGGAGAGAATTAAACACAGAGAAAAATGGCATCACTCAAAGCTGAGAAACCTGTTGGAACTCAACCATCTGCCCCAGCAAAGAAAGCATCTGCTAAGGCTCCTCCTGCTTCCAAATCGGCCCAGAAAAAGCCTCGTGAGCCTAAGAAGAAGGCATCAGGTAACAAGTCAGCTGCAAAAAACTAAGAAGAAGAACGAGTAATTATAAGAGTATGATGAAGAATATGGCATGCAGATCTGTTACTAATCAAGAAATGCATGGCTGCTTTTTAAACTTATGAGTGATATAGTTATTAAAGCACTGACTTGTACTTTCTTCTCTTTGGTTTCCTATTAATGGAATAATCTCATACTCGTATTTGTATTCTTTCCTTTGCCTACTTGTACATACTCCCTCCGTATCAATTTATGTGACATATTTTTCTG



gi|254627148|gb|FS416187.1|FS416187 FS416187 normalized full-length tobacco cDNA library Nicotiana tabacum cDNA clone TBK02GR004

ATGTCACATAAATTAAAATAG
|||||||||||||| ||| |
CACAGTGTATTTAATCTTACC

EST sequence (targeted fragment marked with yellow):
GTTAGTTATCAAACTGTATTAGTAGTTTTAAGTTTGATGATAATTACTCTCTCCATTCTAATTTATGTGACACTATTTCCTTCTTAATCCGTTCTAAATTGAAATCAATATAACTTAAACTCACCTGTAGAAGCTTTTATAGCCACGCAAATTTTATAGCATATTTCAGACCACAAGTTTTAAATGTTATAGTATATTTCAGACCACAAGTTTTAAATGTTACAGTGTATACTCCGAGGATTTATCAAACAGTAATGGAGGTTAAGTATCTTTTTTATGTCTCATTCAAAGTTAATTAGACTTCTGGGTTCAACGAGTTATTGACTTTCATGATATAACGGAGAAGTTTTTTGGTGATTTTAACATTATTTTGATTTTCAGTGCTGTTACTATATGGGTTTGTTCCCTTGATATGTTTGGACTTACATTCAGGTGTGAAATTTTGTTATGTTATGATTAACTAGCTGAACTTGGGATGACGGAAATAGCATAAGTTGTGATCTCCATGTATATCAGATTGCGGAGATATATATTTTTTAAAAGTAAATCCATACACCTCAAGTCACACTCACTTGTGGTGATGCAGGGTTTGGCATTGACCCCTACCTGTATATTAATAACCAAAAAAAAAAAAAAAACTT



gi|190761213|gb|FG152852.1|FG152852 AGN_RNC107xd19r1.ab1 AGN_RNC Nicotiana tabacum cDNA 3', mRNA sequence

ATGTCACATAAATTAAAATAG
|||||| |||| |.|||||||
TACAGTTTATT-AGTTTTATC

EST sequence (targeted fragment marked with yellow):
ATAGTGATATGATCAGTATCAAGCTTCACATCAGCGGTACTCCACAGGACACAACATGGCACATCTCATCCACCGACCACTGCTCTGCGAGTCTATCAATGTCATTGCCAGTGTCGGCTTCATCTACATATCTCAGACTGAGCTGTGAGTCTCCCAAACATTGGTAAGCTTAATAACTGGATGCAGGCAGCTATTACAAAGATAACTGCTATATCTAGTGATGTTGCAGCATAGTCCGCAGCCCCAGCAGAGCCAGAAGTACCTCCGTTAGTGGAGGAAACATTGAAAAAGATACTGGAAAACCAGAAAACCATTATGAATACTCCAGTGGAGCATGAGAAGGTCATTGAGGACTTGAGAAAGCAAGTAAAAAAGATGAAGAAGTCTCAAGTATCGAAGAGATCAGTGGACAAGTTGATAAGGGAGGTCACTAAGTTTGCATCTGCCGGAGATCTGCCATTGGACCTGCTTATGGAGCCTTCAGTCCCAGCAGCAAAAGGCAGCACCAGAGGCAGCAGCCGGCCAGTCTGAGGAGCCGGTTGCCACTTCCCACACTGCTGAGGAGATGATCCAAATGCTCAGCAACCCAGTTGTCCCTCAGCCAGGTGATGATGAGATACAGCTTGAGGCCGAGGTTGCTGATGATCCTATGCATACTGAGATCACATAGGGATTTCTCTCAACTATATGGCCCTTTCCCTGTTCTTATTTTTGTTAAGCATTGAGGATAATGCTTATTTTCATTTGGGCGGGGGTGGTCTATTTTGATTATTTGACATTTGGGTTGTAATAACTCTGATACTATTTTTTTCATCTTTATTTTCCTTTGGTATGTATATATTTTCCCCAAGGAAAATGAATATCTACATCAA