| mature miRNA: TCTTCGCTACTCCTCCCATAC species: Nicotiana tabacum database: miRNEST The numbers on the right side of the alignments show a score calculated for them. When calculating the score, a mismatch is given a score of 1, bulge: 2, and wobble: 0.5. |
| Predicted miRNA targets | |||||||||
gi|190848086|gb|FG177216.1|FG177216 AGN_RNC119xj14r1.ab1 AGN_RNC Nicotiana tabacum cDNA 3', mRNA sequence TCTTCGCTACTCCTCCCATAC EST sequence (targeted fragment marked with yellow): GGGTGAAGTCACCTGTAAAGCATAAGCTCCAGCTTGAGTGATCTGTCTGCTGTCGGCTGGCTACGATTCAGTTTGACAGCAAATATTCCCATGTTTCTGTTAACCCATGATTATTCGTTCAGGTATAACTTGCTAAGAAAGGAATTTCCGGCCACATCTTTCATGGAACCTGGACTATCTGATGCTGGTTTTGACCTGTTGAACAAGCTACTCACTTATGATCCGGATCAGTGACAAACTGCAGAGGATAACTGCTGAAGCTGCGTTGAACCATGAGTGGTTTCGTGAAGTTCCTCTTCCCAAGTCCAAAGAATTCATGCCTACCTTCCCTGCACAGCATGCGCAAGACAGGCGTACGCGAAGAGTAGTGAAGAGTCCAGATCCGCTAGAGGAGCAGCGAAGAAAGGAATTGCAGCAGGGGGAGTTGGGGACTGGTGGCTTGTTTTGCTAAGATAATTGAATAGCATGCAGTAACTGTTGGTGTTTTGTCTAATACTCAGGGTCGATGTGGTTAAGGTTAGAGAGCCATGCGTTGAAAGGAAGATGCAAAACTTGTTTTGACGATCACTTGTGTTGTTCTTTTAGCAGGGCACTTTTGACAGTATATCGCGGAAAAAATGCTTTGACTATTGTACATGTCTCAGATTTTGTTGCAGGTTGACTATCACTGGGCGCTGGAACCTTATCATGTAACTGCTTGCATGGCTGGGTGGCGTAGTCAGTTTATCTATTAAGGAACTGTTTCCAAGGAAACTCGTGTATGTAACATATTTCGATTAAACAATTTTCTCGCAATTGATTTGGATACCTGAGTATTTTGGATTATAT | |||||||||
gi|190849463|gb|FG167191.1|FG167191 AGN_RNC008xj14r1.ab1 AGN_RNC Nicotiana tabacum cDNA 3', mRNA sequence TCTTCGCTACTCCTCCCATAC EST sequence (targeted fragment marked with yellow): ACCAACACTTTGTCGATGCTTGCTCACTCTCAGAAAGAATATGATCTAGCGATGACACCGTTATTGGCGTCTTGGGATATGTAACAGCAGGGATGGATACAGTTGCTATAACAGTTGAATGGGCTATGGCAGAAGTAGTGAAGAACCCAAGGGTTCAACAAAAGGTCCAAGAGGAGCTAGACCGGGTTATTGGGTCGGACCGTATCTTAACCGAACCGGATATATCCAAACTGTCCTACCTACAAAGTGTAGCCAAGGAATCACTAAGGTTGCACCCTCCAACTCCACTAATGCTTCCACACATGGCTGGTGCCAGTGTCAAAGTTGGTAGTTACAACATTCCTAAAGGTTCAATTGTACACGTAAATGTTTGGGCACTTGGACGTGATCCAAAGGTGTGGAAGGATCCTTTGCAATTCAGACCCGAAAGGTTCATAGAGGAGGATGTTGACATGAAGGGTCATGATTTTCGACTGTTACCTTTTGGTGCTGGTAGGCGTATTTGTCCTGGTACAAATCTTGCCATCAATTTGGTCACCTCTATGTTAGCTCACTTATTGCACCATTTTAAATGGTCTCCACCTGCTGGAGTCAAGCTTGAGGACATTGACATGTTGGAAAGCCCTGGAACTGTCACTTACATGCTAACGCCTCTACAAGCTGTGCCTACTCCTAGATTGTCTGCACACTTGTATCAACGTCTTCCTATTTTTATATAACATCTTTGATCCTAGTCTCATGTTACACTCACCTTTTCTTTTGCTTTTTTGTTGTTGTAGTAATTTGACCCGACTCTGAACATTAACCAAACAGCAAATTGATTAA | |||||||||