| mature miRNA: ACATGTTTACAAGTTAAAATGT species: Oryza sativa database: miRNEST The numbers on the right side of the alignments show a score calculated for them. When calculating the score, a mismatch is given a score of 1, bulge: 2, and wobble: 0.5. |
| Predicted miRNA targets | |||||||||
gi|117234403|gb|CT854460.1|CT854460 CT854460 Oryza sativa (indica cultivar-group) cv. Guang Lu Ai 4 Oryza sativa Indica Group cD ACATGTTTACAAGTTAAAATGT EST sequence (targeted fragment marked with yellow): GAAAAAGGAAATCGTCGTGCGGTGTCCGCTCGTCGTCGACTCGCGAGTTCGGCCGCCGCCACCGCCGCCGCCGCCGCCGCCGATCCCCATCCATCCCGCGAGCGAAGCAAGGGCGCAGGCATCCTGATCCGCCCCTGGGCTTGGCTAGCACAACATTTTTTAGTGGGGGAAGGAAGGGAAAGGAATCGGTGGGTGGATCGATGCGAGCGTTCGCGCGAAATCTGGCGGCCATCATCCCTCTCGCGCGCTGCAATGCGACGGCGACTACCGGCGCGGCGCCGTCCTCCCTCGGCCTCAAGGTCGGCGACGCTCTGCGCTAGCGGCGGCGCTTCACAGATGGGGAGGTGGAAGCGTACGCGGAGCTGAGTGGCGACCGCAACCCGGTGCACCTCGACGACGCCTTCGCACGCCAGGAGGGAGGCTTCGGCCGCAGCCGCATCTTGCACGGTATGCTTGTCGACTCACTCTTCGACGCCCTCATCACCTTCCACTTCCCTGGAGTCCTGTATGTTAAGCAGTCGCTGAAGTTTGCGGCAGATGTCGTATGTCGGCGACGGTGTAACTTGTGAACGTGTCTGGCGCTCCTGATCACGTCCTCGTCAAGATGCCTTGATTAGTTAGGTGCCGAGTGCTTCATGAGTGACGATGATGACCTCCTAGCTGTCCATGGTGAAGGTATGTCTGTGATCCTCTGTCTTTACCTCTTACAGCGACGGAGCGTGATGCCTCACCATCCCTGACTAAATACTGGAAGCGTCTTCAGAAGTTGTACAAGTTGTATTTTATGTACTTTTCGTCTACCGATGCTTTCGACAGATAGGTAAGGTTTTTTGTTTCTTTTCGGCTTCTTCGGGTATAACGGGGCTCCCCTTTTAAAGTTTCAAATGACCTCCCATCCGGAGCCTCCTTCAACCCTTAAATTCCGTTTTCAAAAAGGAATCCGGGGGGGAAACCCCCGGTTTTGAAAAATAATAAAAAACAACCATTGGAAAAACAAAGGAGGGGGTGTTACCTTAATAAATTTTTTTTTTGGCCCCCTTTTGCCTTTTAGGGGAGGTTTCCGGGACCCCAAATTCCCCCCCTAATGGAGAAAAGGATTTATCCCCCCCCCCTCACTGGGGCCCCCCCTCTTTTTTAAAAAAGAAGAAAAGGAAAGGGGGGGGAAAAAAAAAATCTGGGGGGGGGGGTGTTTTTTACCCCACCAAAAAAAAATTTATATATGC | |||||||||
gi|88276560|gb|CI397362.1|CI397362 CI397362 Oryza sativa (japonica cultivar-group) seed Oryza sativa Japonica Group cDNA clone J ACATGTTTACAAGTTAAAATGT EST sequence (targeted fragment marked with yellow): GGCAGTTTAGAATAATTGTTCAACCAGCCATTTTGGTTTGTAATCATGTCATACTATTTATTGACATATAACTGATGCTACACAGGCCACTAATTTCTTTACAAGGGTTGCTTGCCAGCCCCGTGTGGCGAGGCCAATACACAAAATCAATTACACGAGTGACATAAAAGTAAGGCCAGGCACAATGCATAATATAATCACACGAAAATCGCATTTGCTAGGACACGATATGCTCTTCTTCTATGCAACCTACAGAAGTTGGGTGCCACCAAATGGGTTGGCTTGCTGATGCCCGTTGTTCGCCATTGGGAATGGGCCAAAACCAGAATCCAAAAATGGGTTTGTTGCAGGGCCCATGCCCACATGCTGCGGTTGCATTGGTGGTCCAAAGGGATTCGCTTGCATCATAGTTGGTAT | |||||||||
gi|117240845|gb|CT842856.1|CT842856 CT842856 Oryza sativa (indica cultivar-group) cv. Guang Lu Ai 4 Oryza sativa Indica Group cD ACATGTTTACAAGTTAAAATGT EST sequence (targeted fragment marked with yellow): AAGAGCAGGACACGCACGAAAGAAATAGGCAGCGTCTTCCCCTTCCCTTTGTGGCGTAAAAGAAAGAAAATCTCCCGTCTCTTCGTCTCCTCCGCTCCTTGCGCCGCCAAGAAGACGAGTCGGGGGCGGCGATCTCCATCTGGCGAGCAGAGCAGGGGAGGGGAGGGGATCCTGGCTCAGTCTTGCGACTTTCTTGCTGTATAATGAGATCATATCTTTGAGTGCTCAATGATGTCAACACTAATTGATGGTCTCCCTAATGAAGTTGCTCTTCAGTGCCTTGCACGGGTGCCATTTTTGTCCCATCCTGTTCTTCAAATGGTCTGCCATTCTTGGAGAGCATCTGTTCGAAATGGTGAGCTTTCCAAAGTTAGGAATCAGATTAGTGCGACTGAAGACCTGTTATGTGTGTTAGCATTTGAACCTGAAAACATGTGGCAGCTTTATGACCCTCTTCGAGATAAGTGGATAACCCTTCCTGTCATGCCATCTCAGATTAGGAATATTGCTCGTTTTGGAGTGGCCTCGGTTGCAGGCAAGCTCTATGTAATTGGTGGTGGCAGTGATCGAGTTGACCCACTTACTGGAGACCATGACAGGATCTTTGCAAGCAATGAGGTTTGGTCTTATGATCCTCTCTGTCGTTTATGGGTCCAGAGGGCTCCAATGCTTGTAGCTCGCGCAATGTTTGCCTGTTGTGCACTGGATGGGAACATAATTGTTGCTGGGGGCTTCACAAATTGCCGCAAATCAATATCAAAGGCTGAGATTTATAAACCCTGAGCTGACACGTGGGAGCCTCTCCCTGACCTACGTCAAGCACACAGCTCTGCATGCTCTGGACTTGTCATAAAGGGTAAGATGCATGTATTGC | |||||||||
gi|29679687|gb|CB675962.1|CB675962 OSJNEe11P15.r OSJNEe Oryza sativa Japonica Group cDNA clone OSJNEe11P15 3', mRNA sequence ACATGTTTACAAGTTAAAATGT EST sequence (targeted fragment marked with yellow): GAGGTCGTGGGCTTCGACGCCTCTACTCTTGCTTATGGCGACCTGGTGAAGAGGGTCCTCAGGTGCTTTGGCCCTTCGGAGTTCTCTGTTGCTGTTACCATCTTTGGTGGGCATGGTCATGCTGGAACATGGGCAAAGGAGCTCAATGCTGATGCTTACAAATGCAACAACATGGTAGAGCAGGAGCTGCCCTGTGGTGGCCTCCTCATCTACCAGAGCTTCGACGCTACTGAAGACGTACCTGTTGCTGTTGGGTCGCCCAAATCTGTTCTGCACTGCTTCGAGGCTGAGAATATGGTGAACCCTGCTCCTGTTAAGGAAGGTAAACTGGGCAATCTTCTCCCCTGGGGAGAGGATGCGTTGGAGGAGAATGATGGAGTGTTTGATGAGTAAGATGGGACTTCTGGTGACGATTCGCTGCTTTGTTTTCATTCCGTGGCATTTTTATCTGTTGAGGTTGTCGTTTGGTTATTCTGTGAAGCAGCCAGCCAGGCTATTAGTATTTTCGCTTGTAAGCATGTGTTTTGATCTTGGGACGTATGCTTGGTCTAAATAATAATGGTGAACTAAAAGCTCTAGGTGGTCAGCTGCGTCTGCCACAATGAGCATGCGTCGGAAGGAATGTGTCAAAACATATGAATAAGTA | |||||||||
gi|29633349|gb|CB638358.1|CB638358 OSJNEa06J03.r OSJNEa Oryza sativa Japonica Group cDNA clone OSJNEa06J03 3', mRNA sequence ACATGTTTACAAGTTAAAATGT EST sequence (targeted fragment marked with yellow): AAAGGAGCTCAATGCTGATGCTTACAAATGCAACAACATGGTAGAGCAGGAGCTGCCCTGTGGTGGCCTCCTCATCTACCAGAGCTTCGACGCTACTGAAGACGTACCTGTTGCTGTTGGGTCGCCCAAATCTGTTTTGCACTGCTTCGAGGCTGAGAATATGGTGAACCCTGCTCCTGTTAAGGAAGGTAAACTGGGCAATCTTCTCCCCTGGGGAGAGGATGCGTTGGAGGAGAATGATGGAGTGTTTTATGAGTAAGATGGGACTTCTGGTGACGATTCGCTGCTTTGTTTTCATTCCGTGGCATTTTTATCTGTTGAGGTTGTCGTTTGGTTATTCTGTGAAGCAGCCAGCCAGGCTATTAGTATTTTCGCTTGTAAGCATGTGTTCTGATCTTGGGACGTAAGCTTGGTCTAAATAATAATGGTGAACTAAAAGCTCTAGGTGGTCAGCTGCGTCTGCCCCAATGAGCATGCGTCGGGAGAAATGTTGTCAAAACATATGAATAAGTATTGCGGG | |||||||||
gi|88397270|gb|CI580780.1|CI580780 CI580780 Oryza sativa (japonica cultivar-group) shoot Oryza sativa Japonica Group cDNA clone ACATGTTTACAAGTTAAAATGT EST sequence (targeted fragment marked with yellow): GCGTGGCGTAAAAGAAAAGAAAATCTCCCGTCTCTTCGTCTCCTCCGCTCCTTGCGCCGCCAAGAAGACGAGTCGGGGGCGGCGATCTCCATCTGGCGAGCAGAGCAGGGGAGGGGAGGGGATCCTGGCTCAGTCTTGCGACTTTCTTGCTGTATAATGAGATCATATCTTTGAGTGCTCAATGATGTCAACACTAATTGATGGTCTCCCTAATGAAGTTGCTCTTCAGTGCCTTGCACGGGTGCCATTTTTGTCCCATCCTGTTCTTCAAATGGTCTGCCATTCTTGGAGAGCATCTGTTCGAAATGGTGAGCTTTCCAAAGTTAGGAATCAGATTAGTGCGACTGAAGACTGTTATGTGTGTTAGCATTTGAACCTGAAAACATGTGGCAGCTTTATGACCCTCTTCGAGATAAGTGGATAACCCTTC | |||||||||
gi|29643911|gb|CB648918.1|CB648918 OSJNEb12I24.r OSJNEb Oryza sativa Japonica Group cDNA clone OSJNEb12I24 3', mRNA sequence ACATGTTTACAAGTTAAAATGT EST sequence (targeted fragment marked with yellow): CAATCCATGGCTCAGCGTTTTCTACCATTCATGTGACCCCTGAGGATGGCTTCAGCTACGCCAGTTATGAGGTCGTGGGCTTCGACGCCTCTACTCTTGCTTATGGCGACCTGGTGAAGAGGGTCCTCAGGTGCTTTGGCCCTTCGGAGTTCTCTGTTGCTGTTACCATCTTTGGTGGGCATGGTCATGCTGGAACATGGGCAAAGGAGCTCAATGCTGATGCTTACAAATGCAACAACATGGTAGAGCAGGAGCTGCCCTGTGGTGGCCTCCTCATCTACCAGAGCTTCGACGCTACTGAAGACGTACCTGTTGCTGTTGGGTCGCCCAAATCTGTTTTGCACTGCTTCGAGGCTGAGAATATGGTGAACCCTGCTCCTGTTAAGGAAGGTAAACTGGGCAATCTTCTCCCCTGGGGAGAGGATGCGTTGGAGGAGAATGATGGAGTGTTTGATGAGTAAGATGGGACTTCTGGTGACGATTCGCTGCTTTGTTTTCATTCCGTGGCATTTTTATCTGTTGAGGTTGTCGTTTGGTTATTCTGTGAAGCAGCCAGCCAGGTTATTAGTATTTTCGCTTGTAAGCATGTGTTCCGATCTTGGGACGTATGCTTGGTCTAAATAATAATGGTGAGCTAAAACCTCTAGGTGGTCAGCTGCGTCTGCCACAATGAGCATGCGTCGGGAGAAATGTTGTCAAAACATATGAATAAGTATTTGCGGGAAATTTCCTTTGCCTTCAAAAAAAGGAAAAAAAAACTCGAGGGGGGGCCCGGTACCCAGC | |||||||||
gi|29634024|gb|CB639033.1|CB639033 OSJNEa08D01.r OSJNEa Oryza sativa Japonica Group cDNA clone OSJNEa08D01 3', mRNA sequence ACATGTTTACAAGTTAAAATGT EST sequence (targeted fragment marked with yellow): GAGAATATGGTGACCCCTGTTCTTGTTAAGGAAGGTAAATTGGGCATTTTTCTCCCTTGGGGAGAGAATGCGTTGGAGGAGAATGATGGAGTGTTTGATGAGTAAGATGGGACTTTTGGTGACGATTCGCTGCTTTGTTTTCATTCCGTGGCATTTTTATCTGTTGAGGTTGTCGTTTGGTTATTCTGTGAACCACCCAGCCAGGATATTAGTATTTTCGCTTGTAAGCATGTGTTCTGATCCTTGGGACGTATGTTTGGTTTAAATAATAATGGTGAATTAAAAGCTCTAGGTGG | |||||||||
gi|86430175|gb|CI082598.1|CI082598 CI082598 Oryza sativa (japonica cultivar-group) ABA: Abscic Acid treated callus Oryza sativa ACATGTTTACAAGTTAAAATGT EST sequence (targeted fragment marked with yellow): TTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTAAAATAATTGTTCAACCAGCCATTTTGGTTTGTAATCATGTCATACTATTTATTGACATATAACTGATGCTACACAGGCCACTAATTTCTTTACAAGGGTTGCTTGCCAGCCCCGTGTGGCGAGGCCAATACACAAAATCAATTACACGAGTGACATACAAGTAAGGCCAGGCACAATGCATAATATAATCACACGAAAATCGCATTTGCTAGGACACGATATGCTCTTCTTCTATGCAACCTACAGAAGTTGGGTGCCACCAAATGGGTTGGCTTGCTGATGCCCGTTGTTCGCCATTGGGAATGGGCCAAAACCAGAATCCAAAAATGGGTTTGTTGCAGGGCCCATGCCCACATGCTGCGGTTGCATTGGTGGTCCAAAGGGATTCGCTTGCCAGTAGGCCAACAGTGCTCGAGGAATTCCGGACCGGTACCAGCCTGCTTTTTTGTACAAACTTGTTCTATAGTGTCACCTAAATAGGCCTAATGGTCATAGCTGTTTCCTGTGTGAA | |||||||||
gi|29625981|gb|CB630992.1|CB630992 OSIIEb08E07.f OSIIEb Oryza sativa Indica Group cDNA clone OSIIEb08E07 5', mRNA sequence ACATGTTTACAAGTTAAAATGT EST sequence (targeted fragment marked with yellow): GTCAGGCCAACGCTTTCGGGGAACCCAAGGCGGGAGGTCTTGTTGGCGATGGCGTAGTACACCTCGCCGAGCATTGTGCCGGAGCCGACCCACGCTGTCTAGCCGCGGACGTCGGACGTCGACCACCCGCCGCCGCCCCCGCTCGACCTGCGTTGATGGCCCGAGAGAGAGGGGGAGAGAGAGACAAGTGATAGAGTATATATGAATTTATATAAATATTTCCCATTGCAACGTATGGGCACCTAACTAGTAATTATAAAAGAAGAAAATATTTATACCATGAAATAGACCATATACTTTGATATACTAAATGTTAATGTCTATCATATTCAAACAAAAATCACTTTGCCACTGTTATATGTAAACTCGCCTATAACCATCCTTCGTAAACATAATATGGATTTTGATTTTTTTTTTCATTCTTTTATTATACATCTCGTTCACATATACATGTTCATGGGTAATATACAAAGGAATAGTTTATATTGCCAAATTATTTATGCTAATTGTTAACACTGTTTACATGAGAATGGCATAATGCGGTTTCATATGACATTTTCGATTGTACACATGTATGCATGTATGTTACCTAGCAAGTATTAGTTTCTTGTACATACATACTTTCTCATGTTTTTTTAACAAATATTTTTCTCTCACAGGGATAGGCTGTGCGAATGTGTATTCATAGGCGTGAAGTTGAGCCACGATGGCATGGCTTCTTCGACAACCTCTCTAGGAGTGGTCGCTACATGAAGAAAACGTCCGAAAATTGCAGGGGAGATTTGTGCTTGTCGGCGTTGTCCAAAACTACTGAAATTCCAAA | |||||||||
gi|88831628|gb|CI369310.1|CI369310 CI369310 Oryza sativa (japonica cultivar-group) callus Oryza sativa Japonica Group cDNA clone ACATGTTTACAAGTTAAAATGT EST sequence (targeted fragment marked with yellow): AGAATAATTGTTCAACCAGCCATTTTGGTTTGTAATCATGTCATACTATTTATTGACATATAACTGATGCTACACAGGCCACTAATTTCTTTACAAGGGTTGCTTGCCAGCCCCGTGTGGCGAGGCCAATACACAAAATCAATTAAACGAGTGAAATACAAGTAAGGCCAGGCACAATGCATAATATAATCACACGAAAATCGCATTTGCTAGGACACGATATGCTCTTCTTCTATGCAACCTAAAGAAGTTGGGTGCCACCAAATGGGTTGGCTTGCTGATGCCCGTTGTTCGCCATTGGGAATGGGCAAAAGGAGAATCCAAAAATGGGTTTGTTGCAGGGGCCATGCCCACATGCTGGGGTTGAATTGGTGGTCCAAAGGGATTCGCTTGCATTATAGTTGGTATCTGTTGATGCTGCTGAGACATGGCAGCCATTTGAAACGATGGTGGAGGAGAAACTTGGTTCGACATTACGAAA | |||||||||
gi|29656523|gb|CB652798.1|CB652798 OSJNEc03C24.r OSJNEc Oryza sativa Japonica Group cDNA clone OSJNEc03C24 3', mRNA sequence ACATGTTTACAAGTTAAAATGT EST sequence (targeted fragment marked with yellow): CATTATCCCAGAGATGGAGATCTGTGACTTTGACTTCGAACCCTGCGGCTAGTCCAGGAATGCAATCCATGGCTCAGCGTGTTCTACCATTCATGTGACCCCTGAGGATGGCTTCAGCTACGCCAGTTATGAGGTCGTGGGCTTTGACGCCTGTACTCTTGCTTATGGCGACCTGGTGAAGAGGGTCCTCAGGTGCTTTGGCCCTTCGGAGTTCTCTGTTGCTGTTACCATCTTTGGTGGGCATGGTCATGCTGGAACATGGGCAAAGGAGCTCAATGATGATGCTTACAAATGCAACAACATGGTAGAGCAGGAGCTGCCCTGTGGTGGCCTCCTCATCTACCAGAGCTTCGACGCTACTGAAGACGTCCCTGTTGCTGTTGGGTCGCCCAAATCTGTTCTGCACTGCTTCGAGGCTGAGAATATGGTGACCCCTGCTCCTGTTAAGGAAGGTAAACTGGGCAATCTTCTCCCCTGGGGAGAGGATGCGTTGGAGGAGAATGATGGAGTGTTTGATGAGTAAGATGGGACTTCTGGTGACGATTCGCTGCTTTGTTTTCATTCCGTGGCATTTTTATCTGTTGAGGTTGTCGTTTGGTTATTCTGTGAAGCAGCCAGCCAGGCTATTAGTATTTTCGCTTGTAAGCATGTGTTTTGATCTTGGGCCGTATGTCCGGTCCTAAATAATAATGGTGAACTAAAAGCTCTAGGTGGTCAGCTGCGTATGCCACAATGAGCATGCGTCGGGAGAAATGTTGTCAAAGACATATGAATAAGTATTTGCGGGAAATTTCCTTTGCCTTGTGCTAATGTTCCTTCCCACCAAAAAAGG | |||||||||
gi|86833377|gb|CI336166.1|CI336166 CI336166 Oryza sativa (japonica cultivar-group) shoot Oryza sativa Japonica Group cDNA clone ACATGTTTACAAGTTAAAATGT EST sequence (targeted fragment marked with yellow): GGGTTGTTTTGAAAGATTTATTATTGAACAATGAAGAGATATGGATATACACACATATTAAAGGCCAGTAAAGACGTACACGTATAGTCGATAGATAGAATCTCTAAGCCGTGCATTTTAAAATGTACACATGTGGACGTGTAGACGCAGTCACGCAAAGCCGGATGGGGGTTTGGATTTTGGGCAGCTCTGCACTGGACAGTCGTCAGTCGACGGATTTTAAGTCATTTGAGTTTCGCTTCTTGGGGACATTAACGGCAACTCGCGGGATTTCCTCGGCGAGCCTTTGGAACGGGGCGTCAGACGACCGGCCCTTCTCGAGGGCCTTCCGGGACGCCGAGTTCAGGGGCAGGGGCTTCTCCCTAGCGTTACTCCCCGGCTCGCCGTGCCTGGCTGC | |||||||||
gi|88404534|gb|CI580970.1|CI580970 CI580970 Oryza sativa (japonica cultivar-group) shoot Oryza sativa Japonica Group cDNA clone ACATGTTTACAAGTTAAAATGT EST sequence (targeted fragment marked with yellow): TTGGTGGCGTAAAAGAAAAGAAAATCTCCCGTCTCTTCGTCTCCTCCGCTCCTTGCGCCGCCAAGAAGACGAGTCGGGGGCGGCGATCTCCATCTGGCGAGCAGAGCAGGGGAGGGGAGGGGATCCTGGCTCAGTCTTGCGACTTTCTTGCTGTATAATGAGATCATATCTTTGAGTGCTCAATGATGTCAACACTAATTGATGGTCTCCCTAATGAAGTTGCTCTTCAGTGCCTTGCACGGGTGCCATTTTTGTCCCATCCTGTTCTTCAAATGGTCTGCCATTCTTGGAGAGCATCTGTTCGAAATGGTGAGCTTTCCAAAGTTAGGAATCAGATTAGTGCGACTGAAGACCTGTTATGTGTGTTAGCATTTGAACCTGAAAACATGTGGCAGCTTTATGACCCTCTTCGAGATAAG | |||||||||
gi|88845215|gb|CI084140.1|CI084140 CI084140 Oryza sativa (japonica cultivar-group) ABA: Abscic Acid treated callus Oryza sativa ACATGTTTACAAGTTAAAATGT EST sequence (targeted fragment marked with yellow): TTTTTTTTTTTTTTTTTTTTTTTTTTAGAATAATTGTTCAACCAGCCATTTTGGTTTGTAATCATGTCATACTATTTATTGACATATAACTGATGCTACACAGGCCACTAATTTCTTTACAAGGGTTGCTTGCCAGCCCCGTGTGGCGAGGCCAATACACAAAATCAATTACACGAGTGACATACAAGTAAGGCCAGGCACAATGCATAATATAATCACACGAAAATCGCATTTGCTAGGACACGATATGCTCTTCTTCTATGCAACCTACAGAAGTTGGGTGGGAAATTGGAAATTCCTAGCAAGTTCTAGACCCCGGCAATTTTCATAGAAGTCAGATAGGCTCCCAGCCTGTTGGCCTGCCCTCCTGTAAATTTCAAGGGCTTTGAGTGCTTCATGTCTTGGCATCTCAAAAAACTTATCAACCAGGTTAATAATCCCATCGTTTATTGCACCATATATTTTGAAGCTCTCTTTTAGCAC | |||||||||
gi|163923149|gb|EG709318.1|EG709318 Os5MPREST1043 Rice young panicles Oryza sativa Japonica Group cDNA clone 5MPR-D3D06S, mRNA s ACATGTTTACAAGTTAAAATGT EST sequence (targeted fragment marked with yellow): ACGGCCGGGTGTTGCTGTTGGGTCGCCCAAATCTGTTCTGCACTGCTTCGAGGCTGAGAATATGGTGAACCCTGCTCCTGTTAAGGAAGGTAAACTGGGCAATCTTCTCCCCTGGGGAGAGGATGCGTTGGAGGAGAATGATGGAGTGTTTGATGAGTAAGATGGGACTTCTGGTGACGATTCGCTGCTTTGTTTTCATTCCGTGGCATTTTTATCTGTTGAGGTTGTCGTTTGGTTATTCTGTGAAGCAGCCAGCCAGGCTATTAGTATTTTCGCTTGTAAGCATGTGTTCTGATCTTGGGACGTATGCTTGGTCTAAATAATAATGGTGAACTAAAAGCTCTAGGTGGTCAGCTGCGTCTGCCACAATGAGCATGCGTCGGGAGAAATGTTGTCAAAACATATGAATA | |||||||||
gi|88840885|gb|CI080339.1|CI080339 CI080339 Oryza sativa (japonica cultivar-group) ABA: Abscic Acid treated callus Oryza sativa ACATGTTTACAAGTTAAAATGT EST sequence (targeted fragment marked with yellow): TTTTTTTTAGAAATAATTGTTCAACCAGCCATTTTGGTTTGTAATCATGTCATACTATTTATTGACATATAACTGATGCTACACAGGCCACTAATTTCTTTACAAGGGTTGCTTGCCAGCCCCGTGTGGCGAGGCCAATACACAAAATCAATTACACGAGTGACATACAAGTAAGGCCAGGCACAATGCATAATATAATCACACGAAAATCGCATTTGCTAGGACACGATATGCTCTTCTTCTATGCAACCTACAGAAGTTGGGTGCCACCAAATGGGTTGGCTTGCTGATGCCCGTTGTTCGCCATTGGGAATGGGCCAAAACCAGAATCCAAAAATGGGTTTGTTGCAGGGCCCATGCCCACATGCTGCGGTTGCATTGGTGGTCCAAAGGGATTCGCTTGCATCATAGTTGGTATCTGTTGATGCTGCTGGGACATGGCAGCCATTTGAACCGATNGTGGAGGAGCAACTTGGTTCGACATTACGAAAGGATCATTTGACATGAACGGGTTGGGAGCTGAAGA | |||||||||
gi|29632229|gb|CB637238.1|CB637238 OSJNEa03J09.r OSJNEa Oryza sativa Japonica Group cDNA clone OSJNEa03J09 3', mRNA sequence ACATGTTTACAAGTTAAAATGT EST sequence (targeted fragment marked with yellow): AGGAGCTCAATGCTGATGCTTACAAATGCAACAACATGGTAGAGCAGGAGCTGCCCTGTGGTGGCCTCCTCATCTACCAGAGCTTCGACGCTACTGAAGACGTACCTGTTGCTGTTGGGTCGCCCAAATCTGTTCTGCACTGCTTCGAGGCTGAGAATATGGTGAACCCTGCTCCTGTTAAGGAAGGTAAACTGGGCAATCTTCTCCCCTGGGGAGAGGATGCGTTGGAGGAGAATGATGGAGTGTTTGATGAGTAAGATGGGACTTCTGGTGACGATTCGCTGCTTTGTTTTCATTCCGTGGCATTTTTATCTGTTGAGGTTGTCGTTTGGTTATTCTGTGAAGCAGCCAGCCAGACTATTAGTATTTTCGCTTGTAAGCATGTGTTCTGATCTTGGGACGTATGCTTGGTCTAAATAATAATGGTGAACTAAAAGCTCTAGGTGGTCAGCTGCGTCTGCCACAATGAGCATGCGTCGGGAGAAATGTTGTCAAAACATATGAATAAGTATTTGCGGGAAA | |||||||||
gi|86833889|gb|CI338260.1|CI338260 CI338260 Oryza sativa (japonica cultivar-group) shoot Oryza sativa Japonica Group cDNA clone ACATGTTTACAAGTTAAAATGT EST sequence (targeted fragment marked with yellow): GGAGTATCATGCATGAGCAGTTTATAATAATTGTTCAACCAGCCATTTTGGTTTGTAATCATGTCATACTATTTATTGACATATAACTGATGCTACACAGGCCACTAATTTCTTTACAAGGGTTGCTTGCCAGCCCCGTGTGGCGAGGCCAATACACAAAATCAATTACACGAGTGACATACAAGTAAGGCCAGGCACAATGCATAATATAATCACACGAAAATCGCATTTGCTAGGACACGATATGCTCTTCTTCTATGCAACCTACAGAAGTTGGGTGCCACCAAATGGGTTGGCTTGCTGATGCCCGTTGTTCGCCATTGGGAATGGGCCAAAACCAGAATCCAAAAATGGGTTTGTTGCAGGGCCCATGCCCACATGCTGCGGTTGCATTGGTGGTCCAAAGGGATTCGCTTGCATCATAGTTGGTATCTGTTGATGCTGCTGAGACATGGCAGCCATTTGAACCGAT | |||||||||
gi|88250674|gb|CI348904.1|CI348904 CI348904 Oryza sativa (japonica cultivar-group) flower Oryza sativa Japonica Group cDNA clone ACATGTTTACAAGTTAAAATGT EST sequence (targeted fragment marked with yellow): AGAATAATTGTTCAACCAGCCATTTTGGTTTGTAATCATGTCATACTATTTATTGACATATAACTGATGCTACACAGGCCACTAATTTCTTTACAAGGGTTGCTTGCCAGCCCCGTGTGGCGAGGCCAATACACAAAATCAATTACACGAGTGACATACAAGTAAGGCCAGGCACAATGCATAATATAATCACACGAAAATCGCATTTGCTAGGACACGATATGCTCTTCTTCTATGCAACCTACAGAAGTTGGGTGCCACCAAATGGGTTGGCTTGCTGATGCCCGTTGTTCGCCATTGGGAATGGGCCAAAACCAGAATCCAAAAATGGGTTTGTTGCAGGGCCCATGCCCACATGCTGCGGTTGCATTGGTGGTCCAAAGGGATTCGCTTGCATCATAGTTGGTATCTGTTGATGCTGCTGAGACATGGAAGCCATTTGAACCGATGGTGGAGGAGCAACTTGGTCGACATTACGAAAGGATCA | |||||||||
gi|88423416|gb|CI576541.1|CI576541 CI576541 Oryza sativa (japonica cultivar-group) shoot Oryza sativa Japonica Group cDNA clone ACATGTTTACAAGTTAAAATGT EST sequence (targeted fragment marked with yellow): ATGGTGGCGTAAAAGAAAAGAAAATCTCCCGTCTCTTCGTCTCCTCCGCTCCTTGCGCCGCCAAGAAGACGAGTCGGGGGCGGGGATCTCCATCTGGCGAGCAGAGCAGGGGAGGGGAGGGGATCCTGGCTCAGTCTTGCGACTTTCTTGCTGTATAATGAGATCATATCTTTGAGTGCTCAATGATGTCAACACTAATTGATGGTCTCCCTAATGAAGTTGCTCTTCAGTGCCTTGCACGGGTGCCATTTTTGTCCCATCCTGTTCTTCAAATGGTCTGCCATTCTTGGAGAGCATCTGTTCGAAATGGTGAGCTTTCCAAAGTTAGGAATCAGATTAGTGCGACTGAAGACCTGTTATGTGTGTTAGCATTTGAACCTGAAAACATGTGGCAGCTTTATGACCCTCTTCGAGATAAG | |||||||||
gi|29682388|gb|CB678663.1|CB678663 OSJNEf01B02.r OSJNEf Oryza sativa Japonica Group cDNA clone OSJNEf01B02 3', mRNA sequence ACATGTTTACAAGTTAAAATGT EST sequence (targeted fragment marked with yellow): CTGAGGATGGTTTCAGCTACGCCAGTTATGAGGTCGTGGGCTTCGACGCCTCTCCTCTTGCTTATGGCGACCTGGTGAAGAGGGTCCTCAGGTGCTTTGCCCCTTCGGAGTTCTCTGTTGCTGTTACCATCTTTGGTGGGCATGGTCATGCTGGAACATGGGCAAAGGAGCTCAATGCTGATGCTTACAAATGCAACAACATGGTAGAGCAGGAGCTGCCCTGTGGTGGCCTCCTCATCTACCAGAGCTTCGACGCTACTGAAGACGTACCTGTTGCTGTTGGGTCGCCCAAATCTGTTCTGCACTGCTTCGAGGCTGAGAATATGGTGAACCCTGCTCCTGTTAAGGAAGGTAAACTGGGCAATCTTCTCCCCTGGGGAGAGGATGCGTTGGAGGAGAATGATGGAGTGTTTGATGAGTAAGATGGGACTTCTGGTGACGATTCGCTGCTTTGTTTTCATTCCGTGGCATTTTTATCTGTTGAGGTTGTCGTTTGGTTATTCTGTGAAGCAGCCAGCCAGGCTATTAGTATTTTCGCTTGTAAGCATGTGTTCCGATCTTGGGACGTATGCTTGGTCTAAATAATAATGGTGATCTTAAGGGTATAGGTGGTCAGCTGCGTCTGCCACAATGAGCATGCGTCGGGAGAAATGTCGTCAAAACCATATCAATAA | |||||||||
gi|88509607|gb|CI437113.1|CI437113 CI437113 Oryza sativa (japonica cultivar-group) 4th leaf leaf 1mM ACC(1-aminocyclopropane-1-c ACATGTTTACAAGTTAAAATGT EST sequence (targeted fragment marked with yellow): GGAGTGAAACAGGCTTCTTTGGAACAAAGGAATTTCATAGGAATTGGTTCATTCCTCCTAAATTCCTTCGCTTCCAAGGAGGCTTAAATGGAGTATCATGCATGAGCAGTTTAGAATAATTGTTCAACCAGCCATTTTGGTTTGTAATCATGTCATACTATTTATTGACATATAACTGATGCTACACAGGCCACTAATTTCTTTACAAGGGTTGCTTGCCAGCCCCGTGTGGCGAGGCCAATACACAAAATCAATTACACGAGTGACATACAAGTAAGGCCAGGCACAATGCATAATATAATCACACGAAAATCGCATTTGCTAGGACACGATATGCTCTTCTTCTATGCAACCTACAGAAGTTGGGTGCCACCAAATGGGTTGGCTTGCTGATGCCCGTTGTTCGCCATTGGGAATGGGCCAAAACCAGAATCCAAAAATGGGTTTG | |||||||||
gi|89178966|gb|CI043471.1|CI043471 CI043471 Oryza sativa (japonica cultivar-group) callus Oryza sativa Japonica Group cDNA clone ACATGTTTACAAGTTAAAATGT EST sequence (targeted fragment marked with yellow): TTATCATGGCATACAGTTTAGAATAATTGTTCAACCAGCCATTTTGGTTTGTAATCATGTCATACTATTTATTGACATATAACTGATGCTACACAGGCCACTAATTTCTTTACAAGGGTTGCTTGCCAGCCCCGTGTGGCGAGGCCAATACACAAAATCAATTACACGAGTGACATACAAGTAAGGCCAGGCACAATGCATAATATAATCACACGAAAATCGCATTTGCTAGGACACGATATGCTCTTCTTCTATGCAACCTACAGAAGTTGGGTGCCACCAAATGGGTTGGCTTGCTGATGCCCGTTGTTCGCCATTGGGAATGGGCCAAAACCAGAATCCAAAAATGGGTTTGTTGCAGGGCCCATGCCCACATGCTGCGGTTGCATTGGTGGTCCAAAGGGATTCGCTTGCATCATAGTTGGTATCTGTTGATGCTGCTGAGACATGGCAGCCATTTGAACCGATGGTGGAGGAGCAACTTGGTTCGACATTACGAAAGGATCATTTGACATGAACGGGTTGGGAGCT | |||||||||
gi|29658218|gb|CB654493.1|CB654493 OSJNEc07B01.r OSJNEc Oryza sativa Japonica Group cDNA clone OSJNEc07B01 3', mRNA sequence ACATGTTTACAAGTTAAAATGT EST sequence (targeted fragment marked with yellow): CATGTGACCCCTGAGGATGGCTTCAGCTACGCCAGTTATGAGGTAGTGGGTTTCGACGCCTATACTCTTGCTTATGGCGACCTGGTGAAGAGGGTCCTCAGGTGCTTTGGCCCTTCGGAGTTTTCTGTTGCTGTTACCATCTTTGGTGGGCATGGTCATGCTGGAACATGGGCAAAGGAGCTCAATGTCTGATGCTTCCAAATGCAACAACATGGTAGAGCAGGAGCTGCCCTGTGGTGGCCTCCTCATTTACCAGAGCTTCGACGCTATTGAAGACGTACCTGTTGCTGTTGGGTCGCCCAAATCTGTTTTGCACTGCTTCGAGGCTGAGAATATGGTGAACCCTGCTCCTGTTAAGGAAGGTAATCTGGGCAATCTTCTCCCCTGGGGAGAGGATGCGTTGGAGGAGAATGATGGAGTGTTTGATGAGTAAGATGGGACTTCTGGTGACGATTCGCTGCTTTGTTTTCATTCCGTGGCATTTTTATCTGTTGAGGTTGTCGTTTGGTTATTCTGTGAAGCAGCCACCCAGGCTATTAGTATTTTCGCTTGTAAGCATGTGTTCTGATCTTGGGACGTATGCTTGGTCTAAATAATAATGGTGAACTAAAAGCTCTAGGTGGTCAGCTGCGTCTGCCACAATGAGCATGCGTCGGGAGAAATGTTGTCAAAACACTATGAATAAGTATTTGCGGGGAATTTCCTTCGCCTTCTGCTAAAAAAAAAAAAACATAAAGGGGGATACAATCTCGAGGGGGGGCCCGGTACCCAGCTTTGTCC | |||||||||
gi|218505565|gb|FG957424.1|FG957424 MA_PA64s_05235 Mature embryo cDNA Library of PA64s Oryza sativa Indica Group cDNA 5', mRNA s ACATGTTTACAAGTTAAAATGT EST sequence (targeted fragment marked with yellow): AGNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNATTCGAATTCGAAAGATATCATCAGGCTTCAGGCAAAGAGAGACTTCCAGTAGAATACCTACCACAGAGGAAAAGAAATGGTGAGAAGGAGAAGAAAGCAAAGCCAACAGAAACTCCAAGTGCTGAAAGTTTTAAGAAAGGAGCTCAAAAGGAAACAAAGGAGGAAAAGAAAGCAAGAAAGGCTGCAGTGAAAGAAGAGAAGAGAGAAGCACGGAAAGCAAAGAAAGAGCTGAAAGGCCTGTACAAATTTGAAACACAGAAGGCTCAGAAGGTTGCTGCTGTTACAGGGCCAGCTTCTATACGGCTAATGTAATAACCATGTTGATTTGTAAACATGTTCTGCACGATAACGACGCAATGTGAGTCGTAAGGAGATCCTCATCCTACAAGGTACGACGGCAAGATATGATACACTGATACCTCCTGGGTCATCTTGTGCCATGTTTGTGGTTTTTGTCGACTAGATACCCAGTGTATACCATGTTTGGACTTCTGTATGAGAAATATGTCGTGTAAGACGTAGGTTATCTAATGGA | |||||||||